CB304834
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304834 vs. ExPASy Swiss-Prot
Match: CH601_BURP0 (60 kDa chaperonin 1 OS=Burkholderia pseudomallei (strain 1106a) GN=groL1 PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.006e-25 Identity = 64/141 (45.39%), Postives = 87/141 (61.70%), Query Frame = -3 Query: 212 VGXATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGAAIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLPTQA 634 VG ATE E++++K R+EDA +AT AA+EEGIVPGGG AL+ + ++ +AD+ G IV +A+ P I N + GYNA T +Y +M++AGV+DP KVTR ALQNAASVAG++L T A Sbjct: 381 VGAATEVEMKEKKARVEDALHATRAAVEEGIVPGGGVALIRARTAIASLTGV--NADQNAGIKIVLRAMEEPLRQIVTNGGEEASVVVAAVAAGKGNYGYNAATGEYVDMVEAGVVDPTKVTRTALQNAASVAGLLLTTDA 519
BLAST of CB304834 vs. ExPASy Swiss-Prot
Match: CH60_SHEDO (60 kDa chaperonin OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=groL PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.314e-25 Identity = 63/142 (44.37%), Postives = 92/142 (64.79%), Query Frame = -3 Query: 209 VGXATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGAAIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLPTQAI 634 VG ATE E++++K R+EDA +AT AA+EEG+VPGGG ALV ++ + I ++ + D++ G I +A+ AP IA NA K+ GYNA D Y +ML+ G++DP KVTR ALQ AAS+AG+++ T+A+ Sbjct: 381 VGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALVRVASMIADI--EVLNEDQKHGVVIALRAMEAPLRQIATNAGQEASVVANTVKNGTGNYGYNAGNDTYGDMLEMGILDPTKVTRSALQFAASIAGLMITTEAM 520
BLAST of CB304834 vs. ExPASy Swiss-Prot
Match: CH60_SCAIO (60 kDa chaperonin OS=Scardovia inopinata GN=groL PE=3 SV=2) HSP 1 Score: 116.316 bits (290), Expect = 1.314e-25 Identity = 69/142 (48.59%), Postives = 87/142 (61.27%), Query Frame = -3 Query: 209 VGXATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGAAIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLPTQAI 634 VG ATE E ++RK RIEDA AAIEEG++PGGG ALV + V K+ + DE GA IV +A+ AP IA NA + +G NA T +YE++L AGV DP KVTR ALQNAAS+AG+ L T+A+ Sbjct: 379 VGAATEVEAKERKHRIEDAVRNAKAAIEEGLLPGGGVALVQAAADVQ--KNVKLEGDEATGAGIVFRAIEAPLKQIAQNAGFSGEVVIDKVRTLPAGSGLNAATGEYEDLLSAGVTDPVKVTRSALQNAASIAGLFLTTEAV 518
BLAST of CB304834 vs. ExPASy Swiss-Prot
Match: CH60_PSEPG (60 kDa chaperonin OS=Pseudomonas putida (strain GB-1) GN=groL PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.314e-25 Identity = 64/143 (44.76%), Postives = 93/143 (65.03%), Query Frame = -3 Query: 209 VGXATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKD-KLEDADERLGAAIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLPTQAI 634 VG TE E++++K R+EDA +AT AA+EEG+VPGGG ALV + AI D K E+ D+ +G A++++A+ AP I NA K GYNA T +Y +M++ G++DPAKVTR ALQ AAS+ G+++ T+A+ Sbjct: 381 VGAGTEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALVRA---LAAIVDLKGENEDQNVGIALLRRAVEAPLRQITANAGDEPSVVADKVKQGSGNFGYNAATGEYGDMIEMGILDPAKVTRSALQAAASIGGLMITTEAM 520
BLAST of CB304834 vs. ExPASy Swiss-Prot
Match: CH60_PELCD (60 kDa chaperonin OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=groL PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.314e-25 Identity = 64/141 (45.39%), Postives = 91/141 (64.54%), Query Frame = -3 Query: 212 VGXATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGAAIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLPTQA 634 VG ATETE++++K R+EDA +AT AA+EEGIVPGGG AL+ + AI+ ++ G IV++A+ P I+ NA + T G+NA D+Y +M++AG+IDP KV R ALQNA+SVAG++L T+A Sbjct: 381 VGAATETEMKEKKARVEDALHATRAAVEEGIVPGGGVALIRC---IKAIESLDLPGEQNWGVNIVKRAMEEPLRQISANAGAEGSIVVNQVRGGADTYGFNAAADEYCDMIEAGIIDPTKVVRSALQNASSVAGLMLTTEA 518
BLAST of CB304834 vs. ExPASy Swiss-Prot
Match: CH60_PARDN (60 kDa chaperonin OS=Parascardovia denticolens GN=groL PE=3 SV=2) HSP 1 Score: 116.316 bits (290), Expect = 1.314e-25 Identity = 69/142 (48.59%), Postives = 87/142 (61.27%), Query Frame = -3 Query: 209 VGXATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGAAIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLPTQAI 634 VG ATE E ++RK RIEDA AAIEEG++PGGG ALV + A K D DE GA IV +A+ AP IA NA + +G NA T +YE++++AGV DP KVTR ALQNAAS+AG+ L T+A+ Sbjct: 379 VGAATEVEAKERKHRIEDAVRNAKAAIEEGLLPGGGVALVQAAGE--AEKSVKLDGDEATGADIVFRAIEAPLKQIAENAGLSGEVVIDKVRTLPAGSGLNAATGEYEDLMKAGVTDPVKVTRSALQNAASIAGLFLTTEAV 518
BLAST of CB304834 vs. ExPASy Swiss-Prot
Match: CH60_HYPNA (60 kDa chaperonin OS=Hyphomonas neptunium (strain ATCC 15444) GN=groL PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.314e-25 Identity = 67/142 (47.18%), Postives = 94/142 (66.20%), Query Frame = -3 Query: 212 VGXATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGAAIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTT-GYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLPTQA 634 VG ATE E+++RK R++DA NAT AA+EEGIVPGGG AL+ S ++ + L D DE+ G IV+KAL AP IA NA +++ + G+NA T++Y +++ GVIDP KV R ALQNAAS+A +++ T+A Sbjct: 381 VGGATEVEVKERKDRVDDALNATRAAVEEGIVPGGGVALLRSSKNIDVV--GLND-DEKAGIDIVRKALEAPIRQIAENAGVEGSVVVNTILNNKSRSYGFNAQTEEYGDLVAMGVIDPVKVVRSALQNAASIASLLITTEA 519
BLAST of CB304834 vs. ExPASy Swiss-Prot
Match: CH60_GEOSF (60 kDa chaperonin OS=Geobacter sp. (strain FRC-32) GN=groL PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.314e-25 Identity = 62/142 (43.66%), Postives = 92/142 (64.79%), Query Frame = -3 Query: 209 VGXATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGAAIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLPTQAI 634 VG ATE E++++K R+EDA +AT AA++EGIVPGGG A + + A+ E ++ G ++++AL P IA NA K+ + GYNA D+Y +M+QAG+IDP KV+R ALQNA+S+AG++L T+A+ Sbjct: 380 VGAATEVEMKEKKARVEDALHATRAAVDEGIVPGGGVAYLRAMSTLDALNLPTE---QQFGVNVIKRALEEPIRQIAQNAGVDGSIVVDKVKNGKDAFGYNAADDEYVDMIQAGIIDPTKVSRSALQNASSIAGLMLTTEAM 518
BLAST of CB304834 vs. ExPASy Swiss-Prot
Match: CH60_CYTH3 (60 kDa chaperonin OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=groL PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.314e-25 Identity = 61/142 (42.96%), Postives = 89/142 (62.68%), Query Frame = -3 Query: 209 VGXATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGAAIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLPTQAI 634 +G ATE E++++K R++DA +AT AA+EEGIVPGGG AL+ + + + DE+ G I++ A+ +P I +NA K+ GYNA D+YE M+ AG+IDP KVTR AL+NAASVA ++L T+ + Sbjct: 380 IGAATEVEMKEKKDRVDDALHATRAAVEEGIVPGGGVALIRAGAALDNVA--FHNEDEKTGIQIIRTAIESPLRAIVYNAGLEGSVIVQKVKEGTGDYGYNAREDRYEAMIAAGIIDPTKVTRLALENAASVASLLLTTECV 519
BLAST of CB304834 vs. ExPASy Swiss-Prot
Match: CH60_BIFAA (60 kDa chaperonin OS=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083) GN=groL PE=3 SV=3) HSP 1 Score: 116.316 bits (290), Expect = 1.314e-25 Identity = 69/142 (48.59%), Postives = 87/142 (61.27%), Query Frame = -3 Query: 209 VGXATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGAAIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLPTQAI 634 VG ATE E ++RK RIEDA AAIEEG++PGGG AL+ + A D + DE GAAIV +A+ AP IA NA + G NA T++YE++L AGV DP KVTR ALQNAAS+AG+ L T+A+ Sbjct: 379 VGAATEVEAKERKHRIEDAVRNAKAAIEEGLLPGGGVALIQAA--AKAKDDVKLEGDEATGAAIVFRAVEAPIKQIAENAGLSGDVVIDKVRSLPDGQGLNAATNEYEDLLAAGVTDPVKVTRSALQNAASIAGLFLTTEAV 518 The following BLAST results are available for this feature:
BLAST of CB304834 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CB304834 ID=CB304834; Name=CB304834; organism=Citrus sinensis; type=EST; length=636bpback to top |