CB304834
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304834 vs. ExPASy Swiss-Prot
Match: CH60_NOVAD (60 kDa chaperonin OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=groL PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.822e-25 Identity = 65/142 (45.77%), Postives = 93/142 (65.49%), Query Frame = -3 Query: 212 VGXATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGAAIVQKALVAPASLIAHNAXXXXXXXXXXXK-DSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLPTQA 634 VG ATE E+++RK R++DA +AT AA+EEGIVPGGG AL++ + + +K +D + G IV++A+ AP IA NA +++ G+NA TD YEN+ AGVIDP KV R ALQ+AASV+G+++ T+A Sbjct: 381 VGGATEVEVKERKDRVDDALHATRAAVEEGIVPGGGTALLYATKALEGLKGANDDQTK--GIDIVRRAIQAPIRQIAANAGHDGAVVSGNLLRENDENQGFNAATDTYENLKAAGVIDPTKVVRTALQDAASVSGLLITTEA 520
BLAST of CB304834 vs. ExPASy Swiss-Prot
Match: CH60_NITEC (60 kDa chaperonin OS=Nitrosomonas eutropha (strain C91) GN=groL PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.822e-25 Identity = 66/142 (46.48%), Postives = 86/142 (60.56%), Query Frame = -3 Query: 209 VGXATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGAAIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLPTQAI 634 VG ATE E++++K R+EDA +AT AA+EEGIVPGGG AL+ D V K D D G IV +AL P I N K+ + GYNA T +Y +++ GV+DP KVTR ALQNA+SVAG++L T A+ Sbjct: 381 VGAATEMEMKEKKARVEDAFHATRAAVEEGIVPGGGVALLRTIDAVSKAKGDNHDQDS--GIKIVLRALEEPLRQIVTNCGDEASVVVNKVKEGKGNFGYNAATGEYGDLVAMGVLDPTKVTRSALQNASSVAGLILTTDAM 520
BLAST of CB304834 vs. ExPASy Swiss-Prot
Match: CH60_MARMM (60 kDa chaperonin OS=Maricaulis maris (strain MCS10) GN=groL PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.822e-25 Identity = 66/142 (46.48%), Postives = 94/142 (66.20%), Query Frame = -3 Query: 212 VGXATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGAAIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTT-GYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLPTQA 634 VG ATE E++++K R++DA NAT AA+EEGIVPGGG AL+ S + ++ ++AD+ G AIV +AL +P IA N+ ++ T G+NA T++Y +ML GVIDPAKV R ALQ+AASVA +++ T+A Sbjct: 381 VGGATEIEVKEKKDRVDDALNATRAAVEEGIVPGGGVALLKASAKLAGLEG--DNADQTQGIAIVARALQSPIRQIATNSGVEGSIVVGKVMENPSATFGFNAQTEEYGDMLAFGVIDPAKVVRTALQDAASVASLLITTEA 520
BLAST of CB304834 vs. ExPASy Swiss-Prot
Match: CH60_DELAS (60 kDa chaperonin OS=Delftia acidovorans (strain DSM 14801 / SPH-1) GN=groL PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.822e-25 Identity = 63/142 (44.37%), Postives = 87/142 (61.27%), Query Frame = -3 Query: 209 VGXATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGAAIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLPTQAI 634 VG ATE E++++K R+EDA +AT AA+EEGIV GGG AL+ V +K DA++ G ++ KA+ AP I NA + G+NA D Y +ML+ G++DP KVTR ALQNAASVA ++L T+A+ Sbjct: 381 VGAATEVEMKEKKARVEDALHATRAAVEEGIVAGGGVALLRAKQAVGDLKTG--DAEQDAGIKLIMKAIEAPLREIVANAGGEPSVVVNAVLNGSGNYGFNAANDTYGDMLEMGILDPTKVTRTALQNAASVASLLLTTEAM 520
BLAST of CB304834 vs. ExPASy Swiss-Prot
Match: CH60_CHRSD (60 kDa chaperonin OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=groL PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.822e-25 Identity = 63/142 (44.37%), Postives = 91/142 (64.08%), Query Frame = -3 Query: 209 VGXATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGAAIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLPTQAI 634 VG ATE E++++K R+EDA ++T AA+EEG+VPGGG ALV + + + +K ++ D+ G AI +A+ AP I NA K E GYNA T +Y ++ GV+DPAKVTR ALQ+A SVAG+++ T+A+ Sbjct: 381 VGAATEFEMKEKKARVEDALHSTRAAVEEGVVPGGGTALVRILNKLVDLKG--DNEDQTHGIAIALRAMEAPLRQIVTNAGQEASVIVNQVKAGEGNYGYNAQTGEYGDLFDMGVLDPAKVTRSALQSAGSVAGLMITTEAM 520
BLAST of CB304834 vs. ExPASy Swiss-Prot
Match: CH60_CAMLR (60 kDa chaperonin OS=Campylobacter lari (strain RM2100 / D67 / ATCC BAA-1060) GN=groL PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.822e-25 Identity = 68/142 (47.89%), Postives = 91/142 (64.08%), Query Frame = -3 Query: 212 VGXATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGAAIVQKALVAPASLIAHNAXXXXXXXXXXXKDS-EWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLPTQA 634 VG ATETE++++K R++DA +AT AA+EEGIV GGGAAL+ + DE +GAAIV++AL AP IA NA ++S E TG++A +Y NML++G+IDP KV R AL NA SVA M+L T+A Sbjct: 380 VGAATETEMKEKKDRVDDALSATKAAVEEGIVIGGGAALIKAKSKISLNL----QGDEAIGAAIVERALRAPLRQIAENAGFDAGVVVNTVENSKEENTGFDAAKGEYVNMLESGIIDPVKVERVALLNAVSVASMLLTTEA 517
BLAST of CB304834 vs. ExPASy Swiss-Prot
Match: CH60_CAMHC (60 kDa chaperonin OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) GN=groL PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.822e-25 Identity = 67/142 (47.18%), Postives = 94/142 (66.20%), Query Frame = -3 Query: 212 VGXATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGAAIVQKALVAPASLIAHNA-XXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLPTQA 634 VG ATETE++++K R++DA +AT AA+EEGIV GGGAAL+ + A+K+ L+ DE++GA IV++AL AP IA NA + E G++A ++ NM +AG+IDP KV R ALQNA SVA ++L T+A Sbjct: 380 VGAATETEMKEKKDRVDDALSATKAAVEEGIVIGGGAALIKAGN---AVKENLK-GDEKIGADIVKRALFAPLRQIAENAGFDAGVIANAVSINKEKAYGFDAACGEFVNMFEAGIIDPVKVERVALQNAVSVASLLLTTEA 517
BLAST of CB304834 vs. ExPASy Swiss-Prot
Match: CH602_RHOPS (60 kDa chaperonin 2 OS=Rhodopseudomonas palustris (strain BisB5) GN=groL2 PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.822e-25 Identity = 66/143 (46.15%), Postives = 94/143 (65.73%), Query Frame = -3 Query: 209 VGXATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGAAIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTT-GYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLPTQAI 634 VG ATE E++++K R+EDA NAT AA++EGIVPGGG AL+ V I + ++AD + G IV KAL AP IA NA +++ T G++A T++Y +ML G++DPAKV R ALQ+AASVA +++ T+A+ Sbjct: 381 VGGATEVEVKEKKDRVEDALNATRAAVQEGIVPGGGVALLRAKKAVGRINN--DNADVQAGINIVLKALEAPIRQIAENAGVEGSIVVGKILENKSETFGFDAQTEEYVDMLAKGIVDPAKVVRTALQDAASVAALLVTTEAM 521
BLAST of CB304834 vs. ExPASy Swiss-Prot
Match: CH602_RHOP5 (60 kDa chaperonin 2 OS=Rhodopseudomonas palustris (strain BisA53) GN=groL2 PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.822e-25 Identity = 62/143 (43.36%), Postives = 94/143 (65.73%), Query Frame = -3 Query: 209 VGXATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGAAIVQKALVAPASLIAHNAXXXXXXXXXXXKD-SEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLPTQAI 634 VG ATE E+++RK R++DA +AT AA+EEGIVPGGG AL+ S+ + +K K + D++ G IV+KAL PA IA NA + ++ G+++ + +Y N++ G+IDP KV R A+QNAASVA +++ T+A+ Sbjct: 381 VGGATEVEVKERKDRVDDAMHATRAAVEEGIVPGGGVALLRASEQLKGLKTK--NDDQKTGVEIVRKALSWPARQIAINAGEDGSVIVGKILEKDQYNYGFDSQSGEYGNLVSKGIIDPTKVVRTAIQNAASVAALLITTEAM 521
BLAST of CB304834 vs. ExPASy Swiss-Prot
Match: CH601_THEFY (60 kDa chaperonin 1 OS=Thermobifida fusca (strain YX) GN=groL1 PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.822e-25 Identity = 70/142 (49.30%), Postives = 90/142 (63.38%), Query Frame = -3 Query: 209 GXATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLE-DADERLGAAIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLPTQAI 631 G ATE EL++RK RIEDA AA+EEGI+PGGG AL+ S A +KLE + DE +GA+IV++A+ P IA NA K E G NA T +Y ++ + GVIDP KVTR ALQNAAS+AG+ L T+A+ Sbjct: 381 GAATEVELKERKHRIEDAVRNAKAAVEEGILPGGGVALLQASI---AAFEKLELEGDEAIGASIVRRAVEEPLKQIAINAGYEGGVVVEKVKSLEPGIGLNAATGEYTDLFKDGVIDPTKVTRSALQNAASIAGLFLTTEAV 519 The following BLAST results are available for this feature:
BLAST of CB304834 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304834 ID=CB304834; Name=CB304834; organism=Citrus sinensis; type=EST; length=636bpback to top |