CB304834
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304834 vs. ExPASy Swiss-Prot
Match: RUBB_SECCE (RuBisCO large subunit-binding protein subunit beta, chloroplastic (Fragment) OS=Secale cereale GN=CPN60 PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 5.153e-30 Identity = 70/143 (48.95%), Postives = 96/143 (67.13%), Query Frame = -3 Query: 209 VGXATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGAAIVQKALVAPASLIAHNAXXXXXXXXXXXKDSE-WTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLPTQAI 634 VG TETEL+++KLR+EDA NAT AA+EEGIV GGG L+ L+ V AIKD LE+ ++++GA IV++AL P LIA NA ++ + GYNA T +YE+++ AG+IDP KV RC L++AASVA L + + Sbjct: 334 VGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLAAKVDAIKDTLENDEQKVGAEIVRRALCYPLKLIAKNAGVNGSVVTEKVLSNDNFKFGYNAATGQYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDVV 476
BLAST of CB304834 vs. ExPASy Swiss-Prot
Match: CH60_LACJO (60 kDa chaperonin OS=Lactobacillus johnsonii GN=groL PE=3 SV=2) HSP 1 Score: 130.954 bits (328), Expect = 5.153e-30 Identity = 75/143 (52.45%), Postives = 94/143 (65.73%), Query Frame = -3 Query: 209 VGXATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPA-IKDKLEDADERLGAAIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLPTQAI 634 VG ATETEL++RK RIEDA NAT AA+EEG V GGG ALV + + +K EDA+ G IV KAL AP IA NA + + GYNA T+K+ENM++AG+IDP KVTR ALQNAAS+A ++L T+A+ Sbjct: 379 VGAATETELKERKYRIEDALNATRAAVEEGYVAGGGTALVDVMKSIQGTVKGDSEDAET--GVKIVMKALGAPVRQIAENAGKDGAVILDHLEHEDPEVGYNAATNKWENMVKAGIIDPTKVTRSALQNAASIAALLLTTEAV 519
BLAST of CB304834 vs. ExPASy Swiss-Prot
Match: CH60_LACGA (60 kDa chaperonin OS=Lactobacillus gasseri (strain ATCC 33323 / DSM 20243) GN=groL PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 5.153e-30 Identity = 74/142 (52.11%), Postives = 92/142 (64.79%), Query Frame = -3 Query: 209 VGXATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGAAIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLPTQAI 634 VG ATETEL++RK RIEDA NAT AA+EEG V GGG ALV + + K + D + G IV KAL AP IA NA + + GYNA TDK+ENM++AG+IDP KVTR ALQNAAS+A ++L T+A+ Sbjct: 379 VGAATETELKERKYRIEDALNATRAAVEEGYVAGGGTALVDVMKSIQG-NVKGDSQDAQTGVNIVMKALGAPVRQIAENAGKDGAVILDHLEHEDPEIGYNAATDKWENMVKAGIIDPTKVTRSALQNAASIAALLLTTEAV 519
BLAST of CB304834 vs. ExPASy Swiss-Prot
Match: CH60_CHLMU (60 kDa chaperonin OS=Chlamydia muridarum GN=groL PE=2 SV=3) HSP 1 Score: 130.954 bits (328), Expect = 5.153e-30 Identity = 68/142 (47.89%), Postives = 95/142 (66.90%), Query Frame = -3 Query: 209 VGXATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGAAIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLPTQAI 634 VG ATE E++++K R++DA++AT AA+EEGI+PGGG AL+ + A L + DER+GA IV KAL AP IA NA GY+A+ D Y +M++AG++DPAKVTR AL++AASVAG++L T+A+ Sbjct: 381 VGAATEIEMKEKKDRVDDAQHATIAAVEEGILPGGGTALIRCIPTLEAFLPMLTNEDERIGARIVLKALSAPLKQIAANAGKEGAIIFQQVMSRSANEGYDALRDAYTDMIEAGILDPAKVTRSALESAASVAGLLLTTEAL 522
BLAST of CB304834 vs. ExPASy Swiss-Prot
Match: CH602_SYNSC (60 kDa chaperonin 2 OS=Synechococcus sp. (strain CC9605) GN=groL2 PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 5.153e-30 Identity = 73/142 (51.41%), Postives = 90/142 (63.38%), Query Frame = -3 Query: 209 VGXATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGAAIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLPTQAI 634 VG ATETE++D+KLR+EDA NAT AA+EEGIVPGGG L HL+ + +E +GA IV AL AP IA NA K G+NA + +Y +ML AG++DPAKVTR LQNAAS+AGMVL T+ I Sbjct: 379 VGAATETEMKDKKLRLEDAINATKAAVEEGIVPGGGTTLAHLAPALEQWAASSLSGEELIGANIVAAALTAPLMRIAENAGANGAVVAENVKARAGAEGFNAASGEYVDMLAAGIVDPAKVTRSGLQNAASIAGMVLTTECI 520
BLAST of CB304834 vs. ExPASy Swiss-Prot
Match: CH60_STAAB (60 kDa chaperonin OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=groL PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 6.731e-30 Identity = 75/142 (52.82%), Postives = 95/142 (66.90%), Query Frame = -3 Query: 209 VGXATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGAAIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLPTQAI 634 VG A+ETEL++RKLRIEDA N+T AA+EEGIV GGG ALV++ V I+ + D G IV KAL AP IA NA K++E G+NA TD++ NML+AG++DP KVTR ALQ+AASVA M L T+A+ Sbjct: 379 VGAASETELKERKLRIEDALNSTRAAVEEGIVAGGGTALVNVYQKVSEIE---AEGDIETGVNIVLKALTAPVRQIAENAGLEGSVIVERLKNAEPGVGFNAATDEWVNMLEAGIVDPTKVTRSALQHAASVAAMFLTTEAV 517
BLAST of CB304834 vs. ExPASy Swiss-Prot
Match: CH60_NATTJ (60 kDa chaperonin OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=groL PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 6.731e-30 Identity = 69/142 (48.59%), Postives = 94/142 (66.20%), Query Frame = -3 Query: 209 VGXATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGAAIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLPTQAI 634 VG ATETE++++KLRIEDA N+T AA+EEGIV GGG AL+ D +P++++ D DE G +IV++AL P +AHN+ K G+NA+ + Y NML AGV+DP KVTR AL+NA S+A M L T+A+ Sbjct: 379 VGAATETEMKEKKLRIEDALNSTRAAVEEGIVAGGGTALI---DVLPSLEEVQADGDESTGVSIVRRALEEPVRQLAHNSGAEGSIVAEQVKQKGTNIGFNALENDYTNMLDAGVVDPKKVTRSALENAGSIAAMFLTTEAV 517
BLAST of CB304834 vs. ExPASy Swiss-Prot
Match: CH60_CARHZ (60 kDa chaperonin OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=groL PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 6.731e-30 Identity = 73/142 (51.41%), Postives = 95/142 (66.90%), Query Frame = -3 Query: 209 VGXATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGAAIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLPTQAI 634 VG ATETE++++KLRIEDA NAT AA+EEGIV GGG +H+ + + +K DER G AIV+KAL P IA NA K G+NA+T++Y +M+ AG++DPAKVTR ALQNAASVA M+L T+A+ Sbjct: 380 VGAATETEMKEKKLRIEDALNATRAAVEEGIVAGGGTTYIHIIKALEEL-EKTATGDERTGIAIVRKALEEPLKQIAINAGLEGSVIVEKVKTLPVGHGFNALTEEYVDMIAAGIVDPAKVTRSALQNAASVAAMLLTTEAL 520
BLAST of CB304834 vs. ExPASy Swiss-Prot
Match: CH60_BACP2 (60 kDa chaperonin OS=Bacillus pumilus (strain SAFR-032) GN=groL PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 6.731e-30 Identity = 73/142 (51.41%), Postives = 96/142 (67.61%), Query Frame = -3 Query: 209 VGXATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGAAIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLPTQAI 634 VG ATETEL++RKLRIEDA N+T AA+EEGIV GGG ALV++ V +I+ D D + G IV ++L P IAHNA K+ E G+NA T+++ NM++ G++DP KVTR ALQNAASVA M+L T+A+ Sbjct: 379 VGAATETELKERKLRIEDALNSTRAAVEEGIVSGGGTALVNVYKKVASIE---ADGDVQTGVNIVLRSLEEPIRQIAHNAGLEGSVIVERLKNEEIGVGFNAATNEWVNMIEKGIVDPTKVTRSALQNAASVAAMLLTTEAV 517
BLAST of CB304834 vs. ExPASy Swiss-Prot
Match: CH602_SYNAS (60 kDa chaperonin 2 OS=Syntrophus aciditrophicus (strain SB) GN=groL2 PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 6.731e-30 Identity = 72/142 (50.70%), Postives = 95/142 (66.90%), Query Frame = -3 Query: 209 VGXATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGAAIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLPTQAI 634 VG ATETE++++K R+EDA NAT AA+EEGIVPGGG A + + A+K + DE++G IV+KAL P +IA NA K+ G+NA T+ YE+M++AGVIDP KVTR ALQNAASVA ++L TQ + Sbjct: 381 VGAATETEMKEKKARVEDALNATRAAVEEGIVPGGGVAYIRTLPILEALK---LEGDEQVGVNIVRKALEEPLKMIAANAGMEGTIVVEKVKEQSGAFGFNARTEVYEDMIEAGVIDPTKVTRFALQNAASVASLMLTTQCM 519 The following BLAST results are available for this feature:
BLAST of CB304834 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304834 ID=CB304834; Name=CB304834; organism=Citrus sinensis; type=EST; length=636bpback to top |