CB304834
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304834 vs. ExPASy Swiss-Prot
Match: CH60_BACSK (60 kDa chaperonin OS=Bacillus clausii (strain KSM-K16) GN=groL PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 8.790e-30 Identity = 74/142 (52.11%), Postives = 92/142 (64.79%), Query Frame = -3 Query: 209 VGXATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGAAIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLPTQAI 634 VG ATETE+++RKLRIEDA N+T AA+EEGIV GGG ALV++ + A+K DE G IV +AL P IAHNA K E GYNA T +Y NM++ G++DP KVTR ALQNAASV+ M L T+A+ Sbjct: 379 VGAATETEMKERKLRIEDALNSTRAAVEEGIVAGGGTALVNV---IKAVKAVDATGDEATGVNIVLRALEEPVRQIAHNAGLEGSIIVEKLKAEEVGVGYNAATGEYVNMVETGILDPVKVTRSALQNAASVSAMFLTTEAV 517
BLAST of CB304834 vs. ExPASy Swiss-Prot
Match: RUBB_CHLRE (RuBisCO large subunit-binding protein subunit beta-1 (Fragment) OS=Chlamydomonas reinhardtii PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.148e-29 Identity = 65/135 (48.15%), Postives = 92/135 (68.15%), Query Frame = -3 Query: 236 VGXATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGAAIVQKALVAPASLIAHNAXXXXXXXXXXXKDS--EWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVA 634 VG TETEL+++KLR+EDA NAT AA+EEG+VPGGG L+ LS+ V IK ++ D ++++GA I+++AL P LIA NA + GYNA TD +EN+++ G+IDP+KV RC+++NA SVA Sbjct: 265 VGAQTETELKEKKLRVEDALNATRAAVEEGVVPGGGCTLLRLSEKVDVIKRRMTDPEQQMGADIIKRALCYPIKLIAQNAGVNGSVVMNEVMKNLDRPHYGYNAATDSFENLMETGIIDPSKVVRCSMENAVSVA 399
BLAST of CB304834 vs. ExPASy Swiss-Prot
Match: CH60_EXISA (60 kDa chaperonin OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=groL PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.148e-29 Identity = 74/144 (51.39%), Postives = 96/144 (66.67%), Query Frame = -3 Query: 209 VGXATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLED--ADERLGAAIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLPTQAI 634 VG ATETEL++RKLRIEDA NAT AA+EEGIV GGG +L+++ +PA++ L + ADE G +V +AL AP IA NA K+ GYNA T +Y +M+ G++DPAKVTR ALQNAASV+ M L T+A+ Sbjct: 379 VGAATETELKERKLRIEDALNATRAAVEEGIVAGGGTSLINV---IPAVRALLSEVTADEATGVKLVLRALEAPVRQIAENAGEEGSVIVEKLKNESVGVGYNAATGEYVDMIAHGIVDPAKVTRSALQNAASVSAMFLTTEAV 519
BLAST of CB304834 vs. ExPASy Swiss-Prot
Match: CH60_CLODI (60 kDa chaperonin OS=Clostridium difficile GN=groL PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.148e-29 Identity = 74/143 (51.75%), Postives = 96/143 (67.13%), Query Frame = -3 Query: 212 VGXATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLE--DADERLGAAIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLPTQA 634 VG ATE EL++RKLRIEDA NAT AA+EEGIV GGG A V + +PAI +E + + +LGA IV+KAL P IA NA +SE TG++A+ +KY NM++AG++DP KV+R ALQNAAS+A L T+A Sbjct: 379 VGAATEVELKERKLRIEDALNATRAAVEEGIVAGGGTAFVSV---IPAIGTLIESLEGEVKLGAQIVKKALEEPLRQIAINAGLEGAVIVQNVVNSEAETGFDALNEKYVNMIEAGIVDPTKVSRSALQNAASIASTFLTTEA 518
BLAST of CB304834 vs. ExPASy Swiss-Prot
Match: CH60_CLOD6 (60 kDa chaperonin OS=Clostridium difficile (strain 630) GN=groL PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.148e-29 Identity = 74/143 (51.75%), Postives = 96/143 (67.13%), Query Frame = -3 Query: 212 VGXATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLE--DADERLGAAIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLPTQA 634 VG ATE EL++RKLRIEDA NAT AA+EEGIV GGG A V + +PAI +E + + +LGA IV+KAL P IA NA +SE TG++A+ +KY NM++AG++DP KV+R ALQNAAS+A L T+A Sbjct: 379 VGAATEVELKERKLRIEDALNATRAAVEEGIVAGGGTAFVSV---IPAIGTLIESLEGEVKLGAQIVKKALEEPLRQIAINAGLEGAVIVQNVVNSEAETGFDALNEKYVNMIEAGIVDPTKVSRSALQNAASIASTFLTTEA 518
BLAST of CB304834 vs. ExPASy Swiss-Prot
Match: CH603_ACAM1 (60 kDa chaperonin 3 OS=Acaryochloris marina (strain MBIC 11017) GN=groL3 PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.148e-29 Identity = 70/142 (49.30%), Postives = 93/142 (65.49%), Query Frame = -3 Query: 209 VGXATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGAAIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLPTQAI 634 VG ATETE++DRKL++EDA NAT AA+EEGIVPGGG LVHL+ + + DE +GA I+ ++L AP I NA K + TGY+A+ ++Y +M AG++DPAKVT L+NAAS+AGMVL T+ I Sbjct: 380 VGAATETEMKDRKLKLEDAINATQAAVEEGIVPGGGTTLVHLAPQLEDWSAEHLVGDELIGAMILVRSLSAPLRQIVENAGLNGGVVVEQVKTLPFNTGYDALNNQYVDMFTAGIVDPAKVTSAGLRNAASIAGMVLTTECI 521
BLAST of CB304834 vs. ExPASy Swiss-Prot
Match: CH601_MOOTA (60 kDa chaperonin 1 OS=Moorella thermoacetica (strain ATCC 39073) GN=groL1 PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.148e-29 Identity = 70/142 (49.30%), Postives = 97/142 (68.31%), Query Frame = -3 Query: 209 VGXATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGAAIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLPTQAI 634 VG ATETEL+++K R+EDA AT AA+EEGIVPGGGA LVH +PA++ + DE +G IV++AL P IA NA + + G++A+ ++Y +M++AG++DPAKVTR ALQNAAS+A M+L T+AI Sbjct: 380 VGAATETELKEKKHRVEDALAATRAAVEEGIVPGGGATLVHA---IPAVEKIQAEGDEAVGVRIVRRALEEPLRQIAANAGLEGSVIVERVRSEQPGIGFDAVKEEYVDMIKAGIVDPAKVTRSALQNAASIASMLLTTEAI 518
BLAST of CB304834 vs. ExPASy Swiss-Prot
Match: RUBB_PEA (RuBisCO large subunit-binding protein subunit beta, chloroplastic OS=Pisum sativum PE=1 SV=2) HSP 1 Score: 129.413 bits (324), Expect = 1.499e-29 Identity = 71/143 (49.65%), Postives = 94/143 (65.73%), Query Frame = -3 Query: 209 VGXATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGAAIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTT-GYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLPTQAI 634 VG TETEL+++KLR+EDA NAT AA+EEGIV GGG L+ L+ V AIKD L + +E++GA IV++AL P LIA NA S+ GYNA T KYE+++ AG+IDP KV RC L++A+SVA L + + Sbjct: 429 VGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLASKVDAIKDTLANDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSSDNPKYGYNAATGKYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCV 571
BLAST of CB304834 vs. ExPASy Swiss-Prot
Match: CH60_PORPU (60 kDa chaperonin, chloroplastic OS=Porphyra purpurea GN=groL PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.499e-29 Identity = 74/142 (52.11%), Postives = 90/142 (63.38%), Query Frame = -3 Query: 209 VGXATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGAAIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLPTQAI 634 VG ATETE++D+KLR+EDA NAT AAIEEGIVPGGG+ VH+S + DE +GA IVQ+AL P IA NA K +++ GY+A K NM AG+IDPAKV R ALQNA S+A MVL T+ I Sbjct: 380 VGAATETEMKDKKLRLEDAINATKAAIEEGIVPGGGSTNVHISGELFVWAKNNLFEDELIGALIVQRALTYPLRRIAFNAGDNGAVVVEKVKTNDFCIGYDASNGKIVNMYDAGIIDPAKVARSALQNATSIAAMVLTTECI 521
BLAST of CB304834 vs. ExPASy Swiss-Prot
Match: CH60_GUITH (60 kDa chaperonin, chloroplastic OS=Guillardia theta GN=groL PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.499e-29 Identity = 72/145 (49.66%), Postives = 95/145 (65.52%), Query Frame = -3 Query: 209 VGXATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLED---ADERLGAAIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLPTQAI 634 VG ATETE++D+KLR+EDA NAT AA+EEGIVPGGG+ L HL++ +KD ED DE +GA IV+++L +P I N K+SE+ GY+A + +M G+IDPAKVTR LQNAAS+A M+L T+ I Sbjct: 380 VGAATETEMKDKKLRLEDAINATKAAVEEGIVPGGGSTLTHLAND---LKDWAEDNLIEDELIGALIVERSLTSPLRRIIENTGQNSAIIIEQIKESEFNIGYDAAKGEIVDMYDVGIIDPAKVTRSGLQNAASIASMILTTECI 521 The following BLAST results are available for this feature:
BLAST of CB304834 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304834 ID=CB304834; Name=CB304834; organism=Citrus sinensis; type=EST; length=636bpback to top |