CB304838

Overview
NameCB304838
Unique NameCB304838
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length547
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CB304838 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAS (Chaperone protein dnaJ OS=Staphylococcus aureus (strain MSSA476) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 6.686e-19
Identity = 46/74 (62.16%), Postives = 53/74 (71.62%), Query Frame = -2 
Query:  160 AGTDYYSTLNVCQNATLQEIKTFYRKLACKYHPDINKSPGAEEKFKEISFAYEVLSDDEKRFVYDRFGEAGMTG 381
            A  DYY  L + ++A+  EIK  YRKL+ KYHPDINK  GA+EKFKEIS AYEVLSDD KR  YD+FG  G  G
Sbjct:    2 AKRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDGPQG 75
[Close]
BLAST of CB304838 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAR (Chaperone protein dnaJ OS=Staphylococcus aureus (strain MRSA252) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 6.686e-19
Identity = 46/74 (62.16%), Postives = 53/74 (71.62%), Query Frame = -2 
Query:  160 AGTDYYSTLNVCQNATLQEIKTFYRKLACKYHPDINKSPGAEEKFKEISFAYEVLSDDEKRFVYDRFGEAGMTG 381
            A  DYY  L + ++A+  EIK  YRKL+ KYHPDINK  GA+EKFKEIS AYEVLSDD KR  YD+FG  G  G
Sbjct:    2 AKRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDGPQG 75
[Close]
BLAST of CB304838 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAN (Chaperone protein dnaJ OS=Staphylococcus aureus (strain N315) GN=dnaJ PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 6.686e-19
Identity = 46/74 (62.16%), Postives = 53/74 (71.62%), Query Frame = -2 
Query:  160 AGTDYYSTLNVCQNATLQEIKTFYRKLACKYHPDINKSPGAEEKFKEISFAYEVLSDDEKRFVYDRFGEAGMTG 381
            A  DYY  L + ++A+  EIK  YRKL+ KYHPDINK  GA+EKFKEIS AYEVLSDD KR  YD+FG  G  G
Sbjct:    2 AKRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDGPQG 75
[Close]
BLAST of CB304838 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAM (Chaperone protein dnaJ OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=dnaJ PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 6.686e-19
Identity = 46/74 (62.16%), Postives = 53/74 (71.62%), Query Frame = -2 
Query:  160 AGTDYYSTLNVCQNATLQEIKTFYRKLACKYHPDINKSPGAEEKFKEISFAYEVLSDDEKRFVYDRFGEAGMTG 381
            A  DYY  L + ++A+  EIK  YRKL+ KYHPDINK  GA+EKFKEIS AYEVLSDD KR  YD+FG  G  G
Sbjct:    2 AKRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDGPQG 75
[Close]
BLAST of CB304838 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAE (Chaperone protein dnaJ OS=Staphylococcus aureus (strain Newman) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 6.686e-19
Identity = 46/74 (62.16%), Postives = 53/74 (71.62%), Query Frame = -2 
Query:  160 AGTDYYSTLNVCQNATLQEIKTFYRKLACKYHPDINKSPGAEEKFKEISFAYEVLSDDEKRFVYDRFGEAGMTG 381
            A  DYY  L + ++A+  EIK  YRKL+ KYHPDINK  GA+EKFKEIS AYEVLSDD KR  YD+FG  G  G
Sbjct:    2 AKRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDGPQG 75
[Close]
BLAST of CB304838 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAC (Chaperone protein dnaJ OS=Staphylococcus aureus (strain COL) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 6.686e-19
Identity = 46/74 (62.16%), Postives = 53/74 (71.62%), Query Frame = -2 
Query:  160 AGTDYYSTLNVCQNATLQEIKTFYRKLACKYHPDINKSPGAEEKFKEISFAYEVLSDDEKRFVYDRFGEAGMTG 381
            A  DYY  L + ++A+  EIK  YRKL+ KYHPDINK  GA+EKFKEIS AYEVLSDD KR  YD+FG  G  G
Sbjct:    2 AKRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDGPQG 75
[Close]
BLAST of CB304838 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAB (Chaperone protein dnaJ OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 6.686e-19
Identity = 46/74 (62.16%), Postives = 53/74 (71.62%), Query Frame = -2 
Query:  160 AGTDYYSTLNVCQNATLQEIKTFYRKLACKYHPDINKSPGAEEKFKEISFAYEVLSDDEKRFVYDRFGEAGMTG 381
            A  DYY  L + ++A+  EIK  YRKL+ KYHPDINK  GA+EKFKEIS AYEVLSDD KR  YD+FG  G  G
Sbjct:    2 AKRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDGPQG 75
[Close]
BLAST of CB304838 vs. ExPASy Swiss-Prot
Match: DNAJ_STAA9 (Chaperone protein dnaJ OS=Staphylococcus aureus (strain JH9) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 6.686e-19
Identity = 46/74 (62.16%), Postives = 53/74 (71.62%), Query Frame = -2 
Query:  160 AGTDYYSTLNVCQNATLQEIKTFYRKLACKYHPDINKSPGAEEKFKEISFAYEVLSDDEKRFVYDRFGEAGMTG 381
            A  DYY  L + ++A+  EIK  YRKL+ KYHPDINK  GA+EKFKEIS AYEVLSDD KR  YD+FG  G  G
Sbjct:    2 AKRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDGPQG 75
[Close]
BLAST of CB304838 vs. ExPASy Swiss-Prot
Match: DNAJ_STAA8 (Chaperone protein dnaJ OS=Staphylococcus aureus (strain NCTC 8325) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 6.686e-19
Identity = 46/74 (62.16%), Postives = 53/74 (71.62%), Query Frame = -2 
Query:  160 AGTDYYSTLNVCQNATLQEIKTFYRKLACKYHPDINKSPGAEEKFKEISFAYEVLSDDEKRFVYDRFGEAGMTG 381
            A  DYY  L + ++A+  EIK  YRKL+ KYHPDINK  GA+EKFKEIS AYEVLSDD KR  YD+FG  G  G
Sbjct:    2 AKRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDGPQG 75
[Close]
BLAST of CB304838 vs. ExPASy Swiss-Prot
Match: DNAJ_STAA3 (Chaperone protein dnaJ OS=Staphylococcus aureus (strain USA300) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 6.686e-19
Identity = 46/74 (62.16%), Postives = 53/74 (71.62%), Query Frame = -2 
Query:  160 AGTDYYSTLNVCQNATLQEIKTFYRKLACKYHPDINKSPGAEEKFKEISFAYEVLSDDEKRFVYDRFGEAGMTG 381
            A  DYY  L + ++A+  EIK  YRKL+ KYHPDINK  GA+EKFKEIS AYEVLSDD KR  YD+FG  G  G
Sbjct:    2 AKRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDGPQG 75
The following BLAST results are available for this feature:
BLAST of CB304838 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_STAAS6.686e-1962.16Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAAR6.686e-1962.16Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAAN6.686e-1962.16Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAAM6.686e-1962.16Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAAE6.686e-1962.16Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAAC6.686e-1962.16Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAAB6.686e-1962.16Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAA96.686e-1962.16Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAA86.686e-1962.16Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAA36.686e-1962.16Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0002_IVaR_G04 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0002_IVaR_G04 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304838 ID=CB304838; Name=CB304838; organism=Citrus sinensis; type=EST; length=547bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCAAAATTGAAGTTAATGC
CTCCGGCCTCACCCACTCCTCCAAAGAGCCCATCTGAACCACCAAAGAAT
GCACTATATAATTCAAAAGGATCCACCCCCTGTGAAGTGTTGCTCAATCC
ATCATATTCTCCAGTCATACCTGCCTCACCAAAGCGATCATATACAAATC
TTTTCTCATCATCTGAAAGGACCTCATACGCAAAACTTATCTCTTTGAAC
TTCTCTTCAGCTCCAGGACTCTTGTTGATATCCGGATGATACTTACAAGC
AAGCTTTCTGTAAAAGGTCTTGATCTCCTGCAACGTGGCATTCTGACAAA
CATTCAAAGTGGAATAGTAATCTGTACCAGCGGCCCTGATCATTCCCCTT
CGATGACTCCGATTATTGCCAAAACAATAATTCCATTTGAAACTGAAACT
CGTACTTAAATGAAGCTTCAAATTGACATAAAATGGACTAGCAATAACGG
GCATACTTCATAAGTTGGGGGCGTTAACAGGAAAAAAAAGGAGTCCC
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