CB304842
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304842 vs. ExPASy Swiss-Prot
Match: NLTP_MAIZE (Non-specific lipid-transfer protein OS=Zea mays PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 2.249e-18 Identity = 39/60 (65.00%), Postives = 44/60 (73.33%), Query Frame = -1 Query: 254 VRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCFRV 433 VRSLN AARTT DR+AACNCLK A + G+ AA +PS+CGV IPY IS STDC RV Sbjct: 60 VRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSRV 119 HSP 2 Score: 31.187 bits (69), Expect = 2.249e-18 Identity = 12/22 (54.55%), Postives = 17/22 (77.27%), Query Frame = -3 Query: 465 AITCGQVTASLAPCIPFLRTGG 530 AI+CGQV +++APCI + R G Sbjct: 28 AISCGQVASAIAPCISYARGQG 49
BLAST of CB304842 vs. ExPASy Swiss-Prot
Match: NLTP_SPIOL (Non-specific lipid-transfer protein OS=Spinacia oleracea PE=1 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 2.944e-18 Identity = 36/57 (63.16%), Postives = 42/57 (73.68%), Query Frame = -1 Query: 263 VRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDC 433 +++LN AA TTPDR+ ACNCLK A I+GI AAGLP CGV IPY ISPST+C Sbjct: 57 IKALNAAAATTPDRKTACNCLKSAANAIKGINYGKAAGLPGMCGVHIPYAISPSTNC 113 HSP 2 Score: 31.9574 bits (71), Expect = 2.944e-18 Identity = 15/27 (55.56%), Postives = 19/27 (70.37%), Query Frame = -3 Query: 468 APVTNA-ITCGQVTASLAPCIPFLRTG 545 AP A ITCG V++ LAPCI +L+ G Sbjct: 21 APYAEAGITCGMVSSKLAPCIGYLKGG 47
BLAST of CB304842 vs. ExPASy Swiss-Prot
Match: NLTP_CICAR (Non-specific lipid-transfer protein OS=Cicer arietinum PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 3.829e-18 Identity = 39/61 (63.93%), Postives = 45/61 (73.77%), Query Frame = -1 Query: 251 VRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCFRVR 433 VR+LN AA TTPDRQAACNCLK A G+I + N AA LP +C V IPYKIS ST+C +R Sbjct: 55 VRNLNSAAVTTPDRQAACNCLKSAAGSISRLNANNAAALPGKCVVNIPYKISTSTNCATIR 115 HSP 2 Score: 31.5722 bits (70), Expect = 3.829e-18 Identity = 12/22 (54.55%), Postives = 18/22 (81.82%), Query Frame = -3 Query: 468 NAITCGQVTASLAPCIPFLRTG 533 +AITCG+V +LAPC+ +L+ G Sbjct: 23 SAITCGRVDTALAPCLGYLQGG 44
BLAST of CB304842 vs. ExPASy Swiss-Prot
Match: NLTP1_LENCU (Non-specific lipid-transfer protein 1 OS=Lens culinaris PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 4.980e-18 Identity = 38/61 (62.30%), Postives = 47/61 (77.05%), Query Frame = -1 Query: 251 VRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCFRVR 433 V+ LNGAARTT DR+AACNCLK + G+I G+KP A LP +CGVR+PY IS ST+C +R Sbjct: 57 VKRLNGAARTTIDRRAACNCLKSSAGSISGLKPGNVATLPGKCGVRLPYTISTSTNCNTIR 117 HSP 2 Score: 28.8758 bits (63), Expect = 4.980e-18 Identity = 10/21 (47.62%), Postives = 16/21 (76.19%), Query Frame = -3 Query: 468 AITCGQVTASLAPCIPFLRTG 530 AI+CG V+ +L PC+ +L+ G Sbjct: 26 AISCGTVSGALVPCLTYLKGG 46
BLAST of CB304842 vs. ExPASy Swiss-Prot
Match: NLTP2_SOLCI (Non-specific lipid-transfer protein 2 OS=Solanum chilense PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.034e-18 Identity = 35/61 (57.38%), Postives = 41/61 (67.21%), Query Frame = -1 Query: 251 VRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCFRVR 433 V+ L G A+TT DRQAAC CLK A + + AA LPS C V IPYKISPSTDC +V+ Sbjct: 54 VKGLLGQAQTTVDRQAACACLKSAASSFTDLDLGKAASLPSTCNVNIPYKISPSTDCSKVQ 114 HSP 2 Score: 40.4318 bits (93), Expect = 5.034e-18 Identity = 16/27 (59.26%), Postives = 21/27 (77.78%), Query Frame = -3 Query: 465 APVTNAITCGQVTASLAPCIPFLRTGG 545 AP A+TCGQVT++LAPC+P+L G Sbjct: 19 APHAEALTCGQVTSTLAPCLPYLMNRG 45
BLAST of CB304842 vs. ExPASy Swiss-Prot
Match: NLTP4_LENCU (Non-specific lipid-transfer protein 4 (Fragment) OS=Lens culinaris PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.436e-17 Identity = 38/61 (62.30%), Postives = 44/61 (72.13%), Query Frame = -1 Query: 251 VRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCFRVR 433 V+ L AA TTPDRQAACNCLK A G+I + N AA LP +CGV IPYKIS ST+C V+ Sbjct: 49 VKKLLAAANTTPDRQAACNCLKSAAGSITKLNTNNAAALPGKCGVNIPYKISTSTNCNTVK 109 HSP 2 Score: 30.4166 bits (67), Expect = 2.436e-17 Identity = 13/22 (59.09%), Postives = 18/22 (81.82%), Query Frame = -3 Query: 465 AITCGQVTASLAPCIPFLRTGG 530 AI+CG VT+ L+PC+ +L TGG Sbjct: 18 AISCGAVTSDLSPCLTYL-TGG 38
BLAST of CB304842 vs. ExPASy Swiss-Prot
Match: NLTP6_LENCU (Non-specific lipid-transfer protein 6 OS=Lens culinaris PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 4.074e-17 Identity = 38/61 (62.30%), Postives = 44/61 (72.13%), Query Frame = -1 Query: 251 VRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCFRVR 433 V+ L AA TTPDRQAACNCLK A G+I + N AA LP +CGV IPYKIS ST+C V+ Sbjct: 57 VKKLLAAANTTPDRQAACNCLKSAAGSITKLNTNNAAALPGKCGVDIPYKISTSTNCNTVK 117 HSP 2 Score: 30.4166 bits (67), Expect = 4.074e-17 Identity = 13/22 (59.09%), Postives = 18/22 (81.82%), Query Frame = -3 Query: 465 AITCGQVTASLAPCIPFLRTGG 530 AI+CG VT+ L+PC+ +L TGG Sbjct: 26 AISCGAVTSDLSPCLTYL-TGG 46
BLAST of CB304842 vs. ExPASy Swiss-Prot
Match: NLTP4_ARATH (Non-specific lipid-transfer protein 4 OS=Arabidopsis thaliana GN=LTP4 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 4.120e-17 Identity = 33/61 (54.10%), Postives = 45/61 (73.77%), Query Frame = -1 Query: 251 VRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCFRVR 433 V+ LNG A+TTPDRQ AC CL+ A +G+ P++A+GLP +CGV IPY IS ST+C ++ Sbjct: 55 VKKLNGMAQTTPDRQQACRCLQSA---AKGVNPSLASGLPGKCGVSIPYPISTSTNCATIK 112 HSP 2 Score: 34.6538 bits (78), Expect = 4.120e-17 Identity = 15/27 (55.56%), Postives = 19/27 (70.37%), Query Frame = -3 Query: 465 APVTNAITCGQVTASLAPCIPFLRTGG 545 A V AITCG V +SL+PC+ +L GG Sbjct: 19 ASVDAAITCGTVASSLSPCLGYLSKGG 45
BLAST of CB304842 vs. ExPASy Swiss-Prot
Match: NLTP2_ORYSI (Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica GN=LTP2-A PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.298e-17 Identity = 37/60 (61.67%), Postives = 42/60 (70.00%), Query Frame = -1 Query: 254 VRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCFRV 433 VRSLN AA TT DR+ ACNCLK G+I G+ AA +PS+CGV IPY ISPS DC V Sbjct: 58 VRSLNSAASTTADRRTACNCLKNVAGSISGLNAGNAASIPSKCGVSIPYTISPSIDCSSV 117 HSP 2 Score: 29.6462 bits (65), Expect = 5.298e-17 Identity = 10/21 (47.62%), Postives = 17/21 (80.95%), Query Frame = -3 Query: 468 AITCGQVTASLAPCIPFLRTG 530 AI+CGQV ++++PC+ + R G Sbjct: 27 AISCGQVNSAVSPCLSYARGG 47
BLAST of CB304842 vs. ExPASy Swiss-Prot
Match: NLT2B_ORYSJ (Non-specific lipid-transfer protein 2B OS=Oryza sativa subsp. japonica GN=LTP2-B PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.298e-17 Identity = 37/60 (61.67%), Postives = 42/60 (70.00%), Query Frame = -1 Query: 254 VRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCFRV 433 VRSLN AA TT DR+ ACNCLK G+I G+ AA +PS+CGV IPY ISPS DC V Sbjct: 57 VRSLNSAATTTADRRTACNCLKNVAGSISGLNAGNAASIPSKCGVSIPYTISPSIDCSSV 116 HSP 2 Score: 29.6462 bits (65), Expect = 5.298e-17 Identity = 10/21 (47.62%), Postives = 17/21 (80.95%), Query Frame = -3 Query: 468 AITCGQVTASLAPCIPFLRTG 530 AI+CGQV ++++PC+ + R G Sbjct: 26 AISCGQVNSAVSPCLSYARGG 46 The following BLAST results are available for this feature:
BLAST of CB304842 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 67
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304842 ID=CB304842; Name=CB304842; organism=Citrus sinensis; type=EST; length=547bpback to top |