CB304842
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304842 vs. ExPASy Swiss-Prot
Match: NLTP3_ORYSI (Non-specific lipid-transfer protein 3 OS=Oryza sativa subsp. indica GN=LTP110-A PE=2 SV=1) HSP 1 Score: 60.8474 bits (146), Expect = 5.372e-12 Identity = 26/60 (43.33%), Postives = 39/60 (65.00%), Query Frame = -1 Query: 254 VRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCFRV 433 VR+LNG A ++ DR+ AC+CLK + R + AA +PS+CGV + + IS S DC ++ Sbjct: 61 VRTLNGKASSSADRRTACSCLKNMASSFRNLNMGNAASIPSKCGVSVAFPISTSVDCSKI 120 HSP 2 Score: 30.0314 bits (66), Expect = 5.372e-12 Identity = 13/26 (50.00%), Postives = 20/26 (76.92%), Query Frame = -3 Query: 453 AITCGQVTASLAPCIPFLRTGGRFSS 530 A++CG VT+S+APC+ ++ GR SS Sbjct: 29 AVSCGDVTSSIAPCLSYVM--GRESS 52
BLAST of CB304842 vs. ExPASy Swiss-Prot
Match: NLTP_AMACA (Non-specific lipid-transfer protein OS=Amaranthus caudatus PE=1 SV=1) HSP 1 Score: 63.5438 bits (153), Expect = 9.269e-12 Identity = 30/61 (49.18%), Postives = 40/61 (65.57%), Query Frame = -1 Query: 251 VRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCFRVR 433 VRSL AA+T DR+ ACNC+K A + + VAA L SQCGVR+ Y +SP+ +C V+ Sbjct: 34 VRSLKAAAQTVADRRMACNCMKSAAQKTKSLNYKVAARLASQCGVRMSYSVSPNVNCNSVQ 94 HSP 2 Score: 26.5646 bits (57), Expect = 9.269e-12 Identity = 10/22 (45.45%), Postives = 15/22 (68.18%), Query Frame = -3 Query: 465 AITCGQVTASLAPCIPFLRTGG 530 A+TC VT +L PC+ +L+ G Sbjct: 1 AVTCTVVTKALGPCMTYLKGTG 22
BLAST of CB304842 vs. ExPASy Swiss-Prot
Match: NLTP1_AMAHP (Non-specific lipid-transfer protein 1 OS=Amaranthus hypochondriacus PE=1 SV=1) HSP 1 Score: 63.5438 bits (153), Expect = 9.269e-12 Identity = 30/61 (49.18%), Postives = 40/61 (65.57%), Query Frame = -1 Query: 251 VRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCFRVR 433 VRSL AA+T DR+ ACNC+K A + + VAA L SQCGVR+ Y +SP+ +C V+ Sbjct: 34 VRSLKAAAQTVADRRMACNCMKSAAQKTKSLNYKVAARLASQCGVRMSYSVSPNVNCNSVQ 94 HSP 2 Score: 26.5646 bits (57), Expect = 9.269e-12 Identity = 10/22 (45.45%), Postives = 15/22 (68.18%), Query Frame = -3 Query: 465 AITCGQVTASLAPCIPFLRTGG 530 A+TC VT +L PC+ +L+ G Sbjct: 1 AVTCTVVTKALGPCMTYLKGTG 22
BLAST of CB304842 vs. ExPASy Swiss-Prot
Match: NLTP1_HORVU (Non-specific lipid-transfer protein 1 OS=Hordeum vulgare GN=LTP1 PE=1 SV=1) HSP 1 Score: 62.3882 bits (150), Expect = 2.003e-11 Identity = 28/60 (46.67%), Postives = 37/60 (61.67%), Query Frame = -1 Query: 254 VRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCFRV 433 VR L+ A+++ DRQ CNCLK I + N AA +PS+C V +PY ISP DC R+ Sbjct: 57 VRDLHNQAQSSGDRQTVCNCLKGIARGIHNLNLNNAASIPSKCNVNVPYTISPDIDCSRI 116 HSP 2 Score: 26.5646 bits (57), Expect = 2.003e-11 Identity = 8/21 (38.10%), Postives = 15/21 (71.43%), Query Frame = -3 Query: 468 AITCGQVTASLAPCIPFLRTG 530 A+ CGQV + + PC+ +++ G Sbjct: 26 ALNCGQVDSKMKPCLTYVQGG 46
BLAST of CB304842 vs. ExPASy Swiss-Prot
Match: NLTP2_ARATH (Non-specific lipid-transfer protein 2 OS=Arabidopsis thaliana GN=LTP2 PE=2 SV=1) HSP 1 Score: 63.1586 bits (152), Expect = 4.388e-11 Identity = 34/62 (54.84%), Postives = 39/62 (62.90%), Query Frame = -1 Query: 251 VRSLNGAARTTPDRQAACNCLKRAYGTIR-GIKPNVAAGLPSQCGVRIPYKISPSTDCFRVR 433 V +L A TTPDRQ AC CL+ A + G+ AAGLPS C V IPYKIS ST+C VR Sbjct: 57 VTNLKNMASTTPDRQQACRCLQSAAKAVGPGLNTARAAGLPSACKVNIPYKISASTNCNTVR 118 HSP 2 Score: 24.6386 bits (52), Expect = 4.388e-11 Identity = 13/27 (48.15%), Postives = 18/27 (66.67%), Query Frame = -3 Query: 468 PVT-NAI-TCGQVTASLAPCIPFLRTG 542 P+T NA+ +CG V +LA CI +L G Sbjct: 20 PITANALMSCGTVNGNLAGCIAYLTRG 46
BLAST of CB304842 vs. ExPASy Swiss-Prot
Match: NLTP1_HELAN (Non-specific lipid-transfer protein AP10 OS=Helianthus annuus PE=1 SV=2) HSP 1 Score: 49.2914 bits (116), Expect = 4.388e-11 Identity = 21/56 (37.50%), Postives = 35/56 (62.50%), Query Frame = -1 Query: 263 RSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDC 430 + L GA RT DR+ AC C K A ++ ++P++A+ LP +CG+ I+P+ +C Sbjct: 58 KKLLGATRTQADRRTACKCAKTAAPQLK-VRPDMASSLPGKCGISTSIPINPNVNC 112 HSP 2 Score: 38.5058 bits (88), Expect = 4.388e-11 Identity = 14/23 (60.87%), Postives = 19/23 (82.61%), Query Frame = -3 Query: 462 AITCGQVTASLAPCIPFLRTGGR 530 AITC VT +L PC+P+LR+GG+ Sbjct: 26 AITCNDVTGNLTPCLPYLRSGGK 48
BLAST of CB304842 vs. ExPASy Swiss-Prot
Match: NLTP_GERHY (Non-specific lipid-transfer protein OS=Gerbera hybrida PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 6.702e-11 Identity = 31/60 (51.67%), Postives = 38/60 (63.33%), Query Frame = -1 Query: 254 VRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCFRV 433 VR LN AA+TTPDRQ AC CLK I N A LP +CG+ I YKI+P+ DC ++ Sbjct: 56 VRGLNNAAKTTPDRQTACGCLKGILAANTRINLNNANSLPGKCGISIGYKITPNIDCSKI 115 The following BLAST results are available for this feature:
BLAST of CB304842 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 67
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304842 ID=CB304842; Name=CB304842; organism=Citrus sinensis; type=EST; length=547bpback to top |