CB304845

Overview
NameCB304845
Unique NameCB304845
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length426
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CB304845 vs. ExPASy Swiss-Prot
Match: FDH_NEUCR (Formate dehydrogenase OS=Neurospora crassa GN=fdh PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.905e-13
Identity = 37/76 (48.68%), Postives = 50/76 (65.79%), Query Frame = -1 
Query:  211 YSGDVRNPQPAPKDHPWRYMPN-----QAVTPHVSGTTIDAQLRYAAGVKDMLDRYFKGE-DFPVQNYIVKAGELA 420
            Y GDV  PQPAP+DHP RY  N      A+ PH+SGT++DAQ RYAAG K +++ Y  G+ D+  ++ IV  G+ A
Sbjct:  280 YGGDVWFPQPAPQDHPLRYAKNPFGGGNAMVPHMSGTSLDAQKRYAAGTKAIIESYLSGKHDYRPEDLIVYGGDYA 355
The following BLAST results are available for this feature:
BLAST of CB304845 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
FDH_NEUCR4.905e-1348.68Formate dehydrogenase OS=Neurospora crassa GN=fdh ... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0002_IVaR_H11 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0002_IVaR_H11 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304845 ID=CB304845; Name=CB304845; organism=Citrus sinensis; type=EST; length=426bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGCACAAAATGAAGTTACTC
ATTCCAGCTGGTTATTATTCCATTGGTAAATGGAGAGTTTACAAACATAG
GAACATTATTCCAGAAGGGACAAACATAGGATTATTCCAGAAGGGCCTGG
TCAACAGAAAATAAACTCAAACGATCAGTCTCTTCACACGTGAAATTATC
GATATTGAGGGGCCAGCTCCCCCGCCTTCACTATGTAATTTTGAACAGGA
AAATCTTCTCCCTTGAAGTATCTGTCAAGCATATCCTTGACTCCCGCAGC
ATAGCGTAGCTGTGCATCAATAGTGGTCCCAGAAACATGAGGGGTCACTG
CTTGATTTGGCATGTAACGCCAGGGATGGTCCTTTGGAGCTGGTTGTGGA
TTCCGAACATCACCACTATAACTACC
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