CB304861
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304861 vs. ExPASy Swiss-Prot
Match: SODM1_CAEEL (Superoxide dismutase [Mn] 1, mitochondrial OS=Caenorhabditis elegans GN=sod-2 PE=1 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 4.354e-25 Identity = 57/97 (58.76%), Postives = 70/97 (72.16%), Query Frame = -2 Query: 301 FGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPT-LVPLLGIDVWEHAYYLQYKNVKPDYLKNVWNVMNWKYASDVYQK 588 FGSL+ L +++SA A+QGSGW WLG + K L V T ANQDPL +A T LVPL GIDVWEHAYYLQYKNV+PDY+ +W + NWK S+ + K Sbjct: 124 FGSLDNLQKQLSASTVAVQGSGWGWLGYCPKGKILKVATCANQDPL--EATTGLVPLFGIDVWEHAYYLQYKNVRPDYVNAIWKIANWKNVSERFAK 218
BLAST of CB304861 vs. ExPASy Swiss-Prot
Match: SODM_PONPY (Superoxide dismutase [Mn], mitochondrial OS=Pongo pygmaeus GN=SOD2 PE=2 SV=3) HSP 1 Score: 113.235 bits (282), Expect = 9.700e-25 Identity = 51/94 (54.26%), Postives = 65/94 (69.15%), Query Frame = -2 Query: 307 FGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNVWNVMNWKYASDVY 588 FGS + +K++A +QGSGW WLG + E L + NQDPL L+PLLGIDVWEHAYYLQYKNV+PDYLK +WNV+NW+ ++ Y Sbjct: 125 FGSFDKFKEKLTAASVGVQGSGWGWLGFNKERGHLQIAACPNQDPL-QGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNVINWENVTERY 217
BLAST of CB304861 vs. ExPASy Swiss-Prot
Match: SODM_PANTR (Superoxide dismutase [Mn], mitochondrial OS=Pan troglodytes GN=SOD2 PE=2 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 9.700e-25 Identity = 51/94 (54.26%), Postives = 65/94 (69.15%), Query Frame = -2 Query: 307 FGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNVWNVMNWKYASDVY 588 FGS + +K++A +QGSGW WLG + E L + NQDPL L+PLLGIDVWEHAYYLQYKNV+PDYLK +WNV+NW+ ++ Y Sbjct: 101 FGSFDKFKEKLTAASVGVQGSGWGWLGFNKERGHLQIAACPNQDPL-QGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNVINWENVTERY 193
BLAST of CB304861 vs. ExPASy Swiss-Prot
Match: SODM_HYLLA (Superoxide dismutase [Mn], mitochondrial OS=Hylobates lar GN=SOD2 PE=2 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 9.700e-25 Identity = 51/94 (54.26%), Postives = 65/94 (69.15%), Query Frame = -2 Query: 307 FGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNVWNVMNWKYASDVY 588 FGS + +K++A +QGSGW WLG + E L + NQDPL L+PLLGIDVWEHAYYLQYKNV+PDYLK +WNV+NW+ ++ Y Sbjct: 101 FGSFDKFKEKLTATSVGVQGSGWGWLGFNKERGHLQIAACPNQDPL-QGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNVINWENVTERY 193
BLAST of CB304861 vs. ExPASy Swiss-Prot
Match: SODM_HUMAN (Superoxide dismutase [Mn], mitochondrial OS=Homo sapiens GN=SOD2 PE=1 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 9.700e-25 Identity = 51/94 (54.26%), Postives = 65/94 (69.15%), Query Frame = -2 Query: 307 FGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNVWNVMNWKYASDVY 588 FGS + +K++A +QGSGW WLG + E L + NQDPL L+PLLGIDVWEHAYYLQYKNV+PDYLK +WNV+NW+ ++ Y Sbjct: 125 FGSFDKFKEKLTAASVGVQGSGWGWLGFNKERGHLQIAACPNQDPL-QGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNVINWENVTERY 217
BLAST of CB304861 vs. ExPASy Swiss-Prot
Match: SODM_BOVIN (Superoxide dismutase [Mn], mitochondrial OS=Bos taurus GN=SOD2 PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.267e-24 Identity = 52/94 (55.32%), Postives = 65/94 (69.15%), Query Frame = -2 Query: 307 FGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNVWNVMNWKYASDVY 588 FGS +K++A +QGSGW WLG + E RL + +NQDPL L+PLLGIDVWEHAYYLQYKNV+PDYLK +WNV+NW+ + Y Sbjct: 125 FGSFAKFKEKLTAVSVGVQGSGWGWLGFNKEQGRLQIAACSNQDPL-QGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNVINWENVTARY 217
BLAST of CB304861 vs. ExPASy Swiss-Prot
Match: SODM_CEBAP (Superoxide dismutase [Mn], mitochondrial OS=Cebus apella GN=SOD2 PE=2 SV=2) HSP 1 Score: 112.079 bits (279), Expect = 2.161e-24 Identity = 50/94 (53.19%), Postives = 65/94 (69.15%), Query Frame = -2 Query: 307 FGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNVWNVMNWKYASDVY 588 FGS + ++++A +QGSGW WLG + E L + NQDPL L+PLLGIDVWEHAYYLQYKNV+PDYLK +WNV+NW+ ++ Y Sbjct: 101 FGSFDKFKERLTAASVGVQGSGWGWLGFNKERGHLQIAACPNQDPL-QGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNVINWENVTERY 193
BLAST of CB304861 vs. ExPASy Swiss-Prot
Match: SODM_CALJA (Superoxide dismutase [Mn], mitochondrial OS=Callithrix jacchus GN=SOD2 PE=2 SV=2) HSP 1 Score: 112.079 bits (279), Expect = 2.161e-24 Identity = 50/94 (53.19%), Postives = 65/94 (69.15%), Query Frame = -2 Query: 307 FGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNVWNVMNWKYASDVY 588 FGS + ++++A +QGSGW WLG + E L + NQDPL L+PLLGIDVWEHAYYLQYKNV+PDYLK +WNV+NW+ ++ Y Sbjct: 101 FGSFDKFKERLTAASVGVQGSGWGWLGFNKERGHLQIAACPNQDPL-QGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNVINWENVTERY 193
BLAST of CB304861 vs. ExPASy Swiss-Prot
Match: SODM_RABIT (Superoxide dismutase [Mn], mitochondrial (Fragment) OS=Oryctolagus cuniculus GN=SOD2 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 3.686e-24 Identity = 50/94 (53.19%), Postives = 65/94 (69.15%), Query Frame = -2 Query: 307 FGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNVWNVMNWKYASDVY 588 FGS + ++++A +QGSGW WLG + E L + ANQDPL L+PLLGIDVWEHAYYLQYKNV+PDYLK +WNV+ W+ ++ Y Sbjct: 106 FGSFDKFKERLTAVSVGVQGSGWGWLGFNKEQGHLQIAACANQDPL-QGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNVITWENVTERY 198
BLAST of CB304861 vs. ExPASy Swiss-Prot
Match: SODM_GANMI (Superoxide dismutase [Mn], mitochondrial OS=Ganoderma microsporum PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 5.323e-23 Identity = 49/91 (53.85%), Postives = 69/91 (75.82%), Query Frame = -2 Query: 319 HFGSLEALIQKMSAEGAALQGSGWVWLGLDTEFKRLVVETTANQDPLVTKAPTLVPLLGIDVWEHAYYLQYKNVKPDYLKNVWNVMNWKYA 591 ++GS++ I++ +A AA+QGSGW WLGL+ KRL + TTANQDPL++ VP++G+D+WEHA+YLQY NVK DYL +W V+N+K A Sbjct: 105 NWGSVDNFIKEFNATTAAIQGSGWGWLGLNPATKRLEITTTANQDPLLSH----VPIIGVDIWEHAFYLQYLNVKADYLAAIWIVINFKEA 191 The following BLAST results are available for this feature:
BLAST of CB304861 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 188
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CB304861 ID=CB304861; Name=CB304861; organism=Citrus sinensis; type=EST; length=592bpback to top |