CB304947

Overview
NameCB304947
Unique NameCB304947
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length563
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig360 contig Csv1_Contig360:1..562. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB304947 vs. ExPASy Swiss-Prot
Match: CYSH_OCEIH (Phosphoadenosine phosphosulfate reductase OS=Oceanobacillus iheyensis GN=cysH PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 7.906e-18
Identity = 57/174 (32.76%), Postives = 91/174 (52.30%), Query Frame = -2
Query:   44 VALIEYAHLTGRPFRVFSLDTGRLNPETYRFFDEVE-KHFGIRIEYMFPD-AVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLRAWITGQRKDQSPGTRSEIPVVQEDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHTQGYISIGCEPCTRPV 559
            + LI+    T +   +  LDT     ETY   ++++ K+  + I    PD  +E QA      L+    D   +CC +RK++PL  AL G  AWI+G R++QS  +RS+   + +D  F+ ++  V  L+ W        +D+W +++  ++P N LH  GY SIGC PCT  V
Sbjct:   54 MVLIDLISKTQKNADIVFLDTDLHFQETYDLIEDIKVKYPTLNIHIKKPDLTLEEQAAEHGSALWKRQPD---QCCYIRKIKPLEDALSGAPAWISGLRREQSV-SRSKTDFINKDERFKSIK--VCPLIHWT------WDDVWEYIKDNNLPYNELHDNGYPSIGCIPCTSQV 215          
BLAST of CB304947 vs. ExPASy Swiss-Prot
Match: CYSH_RHOOB (Phosphoadenosine phosphosulfate reductase OS=Rhodococcus opacus (strain B4) GN=cysH PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.033e-17
Identity = 57/161 (35.40%), Postives = 83/161 (51.55%), Query Frame = -2
Query:   35 VFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDA-VEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLRAWITGQRKDQSPGTRSEIPVVQEDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHTQGYISIGCEPCTRPVLPG 514
            V  LDTG    ET    D VE+ +G+ +     +A V  Q     K LF+   +    CC +RKV PL++ L G +AW+TG R+ ++P TR+  P++  D  F         LVK NP+A     D+ +++    + +N L  +GY SIGC PCT    PG
Sbjct:   78 VLFLDTGYHFAETIGTRDAVEQVYGVNVINARAEASVAEQDAAEGKDLFAREPN---RCCALRKVAPLKKTLAGYKAWVTGIRRVEAP-TRANAPLISFDDAF--------GLVKINPIAAWSDEDMQSYIDEHSILVNPLVDEGYPSIGCAPCTSKPAPG 226          
BLAST of CB304947 vs. ExPASy Swiss-Prot
Match: CYSH_LYSSC (Phosphoadenosine phosphosulfate reductase OS=Lysinibacillus sphaericus (strain C3-41) GN=cysH PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.033e-17
Identity = 53/153 (34.64%), Postives = 80/153 (52.29%), Query Frame = -2
Query:   47 LDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLRAWITGQRKDQSPGTRSEIPVVQEDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHTQGYISIGCEPCTRP 505
            LDT     ETY     V++ +      M   A+ ++      G   +  D +Q CC +RK++PL  AL G +AWI+G R++QSP TR +   +  D  F+ ++  V  L+ W         D+W ++   ++P N LH QGY SIGCE CT+P
Sbjct:   67 LDTDVHFKETYETIRRVKEKYPQLNIVMKKSALTLEQQAAQYGEELWKSDPNQ-CCAIRKIKPLHEALSGTKAWISGLRREQSP-TRQQTNFLNRDDKFKSIK--VCPLIHWT------WKDVWRYVSKNNLPYNPLHDQGYPSIGCEHCTKP 209          
BLAST of CB304947 vs. ExPASy Swiss-Prot
Match: CYSH_MYCA9 (Phosphoadenosine phosphosulfate reductase OS=Mycobacterium abscessus (strain ATCC 19977 / DSM 44196) GN=cysH PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.761e-17
Identity = 64/178 (35.96%), Postives = 88/178 (49.44%), Query Frame = -2
Query:   35 DVALIEYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPD-AVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLRAWITGQRKDQSPGTRSEIPVVQEDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHTQGYISIGCEPCT-RPVLPG 562
            D  L++ A        V  LDTG    ET    D VE  + I +  + P+  V  Q  +  K LF+       ECCR+RKV PLR++L G  AW+TG R+  +P TR+  P++  D  F         LVK N +A     D+  ++      +N L  +GY SIGC PCT +PVL G
Sbjct:   52 DAVLVDLAAQVRPGVDVLFLDTGYHFAETIGTRDAVESVYDIHVVNVAPEQTVAQQDELVGKDLFA---SDPGECCRLRKVVPLRKSLAGYAAWVTGLRRVDAP-TRANAPLISFDEAF--------GLVKINAIAAWTDEDMQKYIDEHGTLVNPLVDEGYPSIGCAPCTAKPVLGG 217          
BLAST of CB304947 vs. ExPASy Swiss-Prot
Match: CYSH_ANOFW (Phosphoadenosine phosphosulfate reductase OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=cysH PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.300e-17
Identity = 54/174 (31.03%), Postives = 87/174 (50.00%), Query Frame = -2
Query:   47 VALIEYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHFG-IRIEYMFPDAVEVQALVRSKGLFS--FYEDGHQECCRVRKVRPLRRALKGLRAWITGQRKDQSPGTRSEIPVVQEDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHTQGYISIGCEPCTRP 559
            + LI+          +  LDT    PETY   + V++ +  +RI    P      +L   +  F    ++    +CC +RK+ PLR+A+ G +AWI+G R++QSP TR  +  +  D  F+ ++  V  L+ W         D+W ++   ++  N LH +GY SIGC PCT P
Sbjct:   50 IVLIDLISQVRDDAEIVFLDTHLHFPETYETIERVKQAYPRLRIHLQTPSL----SLAEQEKQFGAELWKTDPNKCCELRKIIPLRQAMTGKKAWISGLRREQSP-TRQHVEFINLDKKFQNIK--VCPLIHWT------WKDVWRYVHRHNLSYNPLHDRGYPSIGCAPCTAP 210          
BLAST of CB304947 vs. ExPASy Swiss-Prot
Match: CYSH_STRCO (Phosphoadenosine phosphosulfate reductase OS=Streptomyces coelicolor GN=cysH PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.322e-16
Identity = 63/175 (36.00%), Postives = 80/175 (45.71%), Query Frame = -2
Query:   32 AHLTGRPFR---VFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFP--DAVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLRAWITGQRKDQSPGTRSEIPVVQEDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHTQGYISIGCEPCTRPVLPGQ 541
            AHL  R      V  LDTG   PET    D VE    + +  + P     E  A    K     ++     CC +RKV+PL   L G RAW TG R+D+S  TR+  PVV  D             VK +P+A     D+  ++    V  N L T GY S+GC PCTR VL G+
Sbjct:   56 AHLASRALPGVDVVFLDTGYHFPETIGTRDAVEAVMDVNVITLTPRQTVAEQDAEYGPK----LHDRDPDLCCALRKVKPLEEGLAGYRAWATGLRRDESE-TRANTPVVGWDEK--------RGKVKISPIAKWSQEDVQTYVTEHGVLTNPLLTDGYASVGCAPCTRRVLEGE 217          
BLAST of CB304947 vs. ExPASy Swiss-Prot
Match: CYSH_XANC5 (Phosphoadenosine phosphosulfate reductase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=cysH PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 5.666e-16
Identity = 56/164 (34.15%), Postives = 81/164 (49.39%), Query Frame = -2
Query:   29 VFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLRA--WITGQRKDQSPGTRSEIPVVQEDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHTQGYISIGCEPCTRPVLPGQQ 514
            V  +DTG L PETYRF D + +   + ++   P         R   L+     G  +   +RKV P+RRAL  L    W TG R+ QS G R++ P+VQ+           G   K +P+A+    D+W +L+  D+P + L  QGY+SIG    TR   PG +
Sbjct:   70 VILIDTGYLFPETYRFADALTERLKLNLKVYRPLVSRAWMEARHGRLWEQGMVGIDQYNNLRKVEPMRRALDELEVGTWFTGLRRSQSGG-RAQTPIVQKR----------GERYKISPIADWTDRDVWQYLQAHDLPYHPLWEQGYVSIGDFHTTRRWEPGMR 222          
BLAST of CB304947 vs. ExPASy Swiss-Prot
Match: CYSH_XYLFA (Phosphoadenosine phosphosulfate reductase OS=Xylella fastidiosa GN=cysH PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 7.400e-16
Identity = 55/164 (33.54%), Postives = 83/164 (50.61%), Query Frame = -2
Query:   29 VFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLRA--WITGQRKDQSPGTRSEIPVVQEDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHTQGYISIGCEPCTRPVLPGQQ 514
            V  +DTG L PETYRF D + +   + ++   P         R   L+    DG  +   + KV P+RRAL+ L+   W TG R+ QS  TR++  +VQ+               K +P+A+    DIW +++  D+P + L  QGY+SIG    TRP+ PG +
Sbjct:   66 VILVDTGYLFPETYRFADTLTERLKLNLKVYQPLRSGAWTEARHGRLWEQGIDGINQYNTLHKVEPMRRALEELQVGTWFTGLRRGQS-STRTQTSIVQQRD----------ERYKISPIADWTDRDIWEYMKHHDLPYHPLWEQGYVSIGDIHTTRPLEPGMR 218          
BLAST of CB304947 vs. ExPASy Swiss-Prot
Match: CYSH_XANOP (Phosphoadenosine phosphosulfate reductase OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=cysH PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.649e-15
Identity = 55/164 (33.54%), Postives = 81/164 (49.39%), Query Frame = -2
Query:   29 VFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLRA--WITGQRKDQSPGTRSEIPVVQEDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHTQGYISIGCEPCTRPVLPGQQ 514
            V  +DTG L PETYRF D + +   + ++   P         R   L+     G  +   +RKV P+RRAL  L    W TG R+ QS G R++ P+VQ+           G   K +P+A+    D+W +L+  ++P + L  QGY+SIG    TR   PG +
Sbjct:   70 VILIDTGYLFPETYRFADALTERLKLNLKVYRPLVSRAWMEARHGRLWEQGMVGIDQYNNLRKVEPMRRALDELNVGTWFTGLRRSQSGG-RAQTPIVQKR----------GERYKISPIADWTDRDVWQYLQAHELPYHPLWEQGYVSIGDFHTTRRWEPGMR 222          
BLAST of CB304947 vs. ExPASy Swiss-Prot
Match: CYSH_XANOM (Phosphoadenosine phosphosulfate reductase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=cysH PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.649e-15
Identity = 55/164 (33.54%), Postives = 81/164 (49.39%), Query Frame = -2
Query:   29 VFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLRA--WITGQRKDQSPGTRSEIPVVQEDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHTQGYISIGCEPCTRPVLPGQQ 514
            V  +DTG L PETYRF D + +   + ++   P         R   L+     G  +   +RKV P+RRAL  L    W TG R+ QS G R++ P+VQ+           G   K +P+A+    D+W +L+  ++P + L  QGY+SIG    TR   PG +
Sbjct:   70 VILIDTGYLFPETYRFADALTERLKLNLKVYRPLVSRAWMEARHGRLWEQGMVGIDQYNNLRKVEPMRRALDELNVGTWFTGLRRSQSGG-RAQTPIVQKR----------GERYKISPIADWTDRDVWQYLQAHELPYHPLWEQGYVSIGDFHTTRRWEPGMR 222          
The following BLAST results are available for this feature:
BLAST of CB304947 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 82
Match NameE-valueIdentityDescription
CYSH_OCEIH7.906e-1832.76Phosphoadenosine phosphosulfate reductase OS=Ocean... [more]
CYSH_RHOOB1.033e-1735.40Phosphoadenosine phosphosulfate reductase OS=Rhodo... [more]
CYSH_LYSSC1.033e-1734.64Phosphoadenosine phosphosulfate reductase OS=Lysin... [more]
CYSH_MYCA91.761e-1735.96Phosphoadenosine phosphosulfate reductase OS=Mycob... [more]
CYSH_ANOFW2.300e-1731.03Phosphoadenosine phosphosulfate reductase OS=Anoxy... [more]
CYSH_STRCO3.322e-1636.00Phosphoadenosine phosphosulfate reductase OS=Strep... [more]
CYSH_XANC55.666e-1634.15Phosphoadenosine phosphosulfate reductase OS=Xanth... [more]
CYSH_XYLFA7.400e-1633.54Phosphoadenosine phosphosulfate reductase OS=Xylel... [more]
CYSH_XANOP1.649e-1533.54Phosphoadenosine phosphosulfate reductase OS=Xanth... [more]
CYSH_XANOM1.649e-1533.54Phosphoadenosine phosphosulfate reductase OS=Xanth... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0003_IIIaR_E09 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0003_IIIaR_E09 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304947 ID=CB304947; Name=CB304947; organism=Citrus sinensis; type=EST; length=563bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCTGTCCTGGAAGGACAGGC
CTTGTGCATGGCTCACACCCAATTGAGATGTACCCTTGTGTGTGCAAGGA
ATTGATGGGCACATCCATAGTACGAAGGAAGTTCCAAATGTCATTCCCCT
TCACATTAGCCACTGGATTCCACTTCACCAGGCTGCCAACCCCACCTTCC
AGCCCCTCAAAAACTGGATCCTCCTGGACTACAGGGATTTCAGACCTAGT
ACCTGGAGACTGATCTTTCCTTTGGCCAGTGATCCAGGCACGCAATCCCT
TGAGGGCCCTCCGAAGGGGCCTCACTTTCCTCACACGGCAGCACTCCTGG
TGCCCATCCTCATAGAAAGAGAAGAGCCCCTTGCTCCTCACTAATGCCTG
AACTTCAACAGCATCGGGAAACATGTATTCAATACGTATGCCAAAATGTT
TCTCAACTTCGTCAAAGAATCTATATGTTTCTGGGTTTAGCCTTCCAGTA
TCCAGGCTAAACACCCTAAATGGTCTACCAGTTAAATGGGCATACTCGAT
CAAAGCAACATCT
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