CB304947

Overview
NameCB304947
Unique NameCB304947
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length563
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig360 contig Csv1_Contig360:1..562. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CB304947 vs. ExPASy Swiss-Prot
Match: CYSH_BACHK (Phosphoadenosine phosphosulfate reductase OS=Bacillus thuringiensis subsp. konkukian GN=cysH PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 6.264e-15
Identity = 53/163 (32.52%), Postives = 79/163 (48.47%), Query Frame = -2 
Query:   35 RVFSLDTGRLNPETYRFFDEVEKHFGIR--IEYMFPDAVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLRAWITGQRKDQSPGTRSEIPVVQEDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHTQGYISIGCEPCTRPVLPG 517
            +V  LDT     ETY    +V + F     IE      ++ QA +    L   +E     CC++RK+ PL  +L   +AWI+G R++QS  TR     + +D  F+ ++  V  L+ W         ++W ++    +P N LH  GY SIGCE CT PV  G
Sbjct:   63 KVVFLDTNVHFQETYELIQKVRERFPSLNIIEKQPKLTLDEQAKLHGNKL---WESNPNLCCKIRKILPLEESLANEKAWISGLRREQSE-TRKHTKFINQDHRFQSIK--VCPLIHWT------WKEVWRYVYKHSLPYNPLHDIGYPSIGCEKCTLPVGEG 213
[Close]
BLAST of CB304947 vs. ExPASy Swiss-Prot
Match: CYSH_BACCZ (Phosphoadenosine phosphosulfate reductase OS=Bacillus cereus (strain ZK / E33L) GN=cysH PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 6.264e-15
Identity = 53/163 (32.52%), Postives = 79/163 (48.47%), Query Frame = -2 
Query:   35 RVFSLDTGRLNPETYRFFDEVEKHFGIR--IEYMFPDAVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLRAWITGQRKDQSPGTRSEIPVVQEDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHTQGYISIGCEPCTRPVLPG 517
            +V  LDT     ETY    +V + F     IE      ++ QA +    L   +E     CC++RK+ PL  +L   +AWI+G R++QS  TR     + +D  F+ ++  V  L+ W         ++W ++    +P N LH  GY SIGCE CT PV  G
Sbjct:   63 KVVFLDTNVHFQETYELIQKVRERFPSLNIIEKQPKLTLDEQAKLHGNKL---WESNPNLCCKIRKILPLEESLANEKAWISGLRREQSE-TRKHTKFINQDHRFQSIK--VCPLIHWT------WKEVWRYVYKHSLPYNPLHDIGYPSIGCEKCTLPVGEG 213
[Close]
BLAST of CB304947 vs. ExPASy Swiss-Prot
Match: CYSH_BACC7 (Phosphoadenosine phosphosulfate reductase OS=Bacillus cereus (strain AH187) GN=cysH PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 6.264e-15
Identity = 53/163 (32.52%), Postives = 79/163 (48.47%), Query Frame = -2 
Query:   35 RVFSLDTGRLNPETYRFFDEVEKHFGIR--IEYMFPDAVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLRAWITGQRKDQSPGTRSEIPVVQEDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHTQGYISIGCEPCTRPVLPG 517
            +V  LDT     ETY    +V + F     IE      ++ QA +    L   +E     CC++RK+ PL  +L   +AWI+G R++QS  TR     + +D  F+ ++  V  L+ W         ++W ++    +P N LH  GY SIGCE CT PV  G
Sbjct:   63 KVVFLDTNVHFQETYELIQKVRERFPSLNIIEKQPKLTLDEQAKLHGNKL---WESNPNLCCKIRKILPLEESLANEKAWISGLRREQSE-TRKHTKFINQDHRFQSIK--VCPLIHWT------WKEVWRYVYKHSLPYNPLHDIGYPSIGCEKCTLPVGEG 213
[Close]
BLAST of CB304947 vs. ExPASy Swiss-Prot
Match: CYSH_XYLFT (Phosphoadenosine phosphosulfate reductase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=cysH PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 8.181e-15
Identity = 54/161 (33.54%), Postives = 80/161 (49.69%), Query Frame = -2 
Query:   38 VFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLRA--WITGQRKDQSPGTRSEIPVVQEDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHTQGYISIGCEPCTRPVLP 514
            V  +DTG L PETYRF D + +   + ++   P         R   L+    DG  +   + KV P+RRAL+ L+   W TG R+ QS  TR++  +VQ                K +P+A+    DIW +++  D+P + L  QGY+SIG    TRP+ P
Sbjct:   66 VILVDTGYLFPETYRFADTLTERLKLNLKVYQPLRSGAWTEARHGRLWEQGIDGINQYNTLHKVEPMRRALEELQVGTWFTGLRRGQS-STRTQTSIVQRRD----------ERYKISPIADWTDRDIWEYMKHHDLPYHPLWEQGYVSIGDIHTTRPLEP 215
[Close]
BLAST of CB304947 vs. ExPASy Swiss-Prot
Match: CYSH_XYLF2 (Phosphoadenosine phosphosulfate reductase OS=Xylella fastidiosa (strain M23) GN=cysH PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 8.181e-15
Identity = 54/161 (33.54%), Postives = 80/161 (49.69%), Query Frame = -2 
Query:   38 VFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLRA--WITGQRKDQSPGTRSEIPVVQEDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHTQGYISIGCEPCTRPVLP 514
            V  +DTG L PETYRF D + +   + ++   P         R   L+    DG  +   + KV P+RRAL+ L+   W TG R+ QS  TR++  +VQ                K +P+A+    DIW +++  D+P + L  QGY+SIG    TRP+ P
Sbjct:   66 VILVDTGYLFPETYRFADTLTERLKLNLKVYQPLRSGAWTEARHGRLWEQGIDGINQYNTLHKVEPMRRALEELQVGTWFTGLRRGQS-STRTQTSIVQRRD----------ERYKISPIADWTDRDIWEYMKHHDLPYHPLWEQGYVSIGDIHTTRPLEP 215
[Close]
BLAST of CB304947 vs. ExPASy Swiss-Prot
Match: CYSH_BACC1 (Phosphoadenosine phosphosulfate reductase OS=Bacillus cereus (strain ATCC 10987) GN=cysH PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 8.181e-15
Identity = 53/163 (32.52%), Postives = 80/163 (49.08%), Query Frame = -2 
Query:   35 RVFSLDTGRLNPETYRFFDEVEKHF-GIRIEYMFPD-AVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLRAWITGQRKDQSPGTRSEIPVVQEDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHTQGYISIGCEPCTRPVLPG 517
            +V  LDT     ETY    +V + F  + I    P+  ++ QA +    L   +E     CC++RK+ PL  +L   +AWI+G R++QS  TR     + +D  F  ++  V  L+ W         ++W ++    +P N LH  GY SIGCE CT PV  G
Sbjct:   63 KVVFLDTNVHFQETYELIQKVRERFPSLNIIEKQPELTLDEQANLHGDKL---WESNPNLCCKIRKILPLEESLANEKAWISGLRREQSE-TRKHTKFINQDHRFRSIK--VCPLIHWT------WKEVWRYVYKHSLPYNPLHDIGYPSIGCEKCTLPVGEG 213
[Close]
BLAST of CB304947 vs. ExPASy Swiss-Prot
Match: CYSH_BACAN (Phosphoadenosine phosphosulfate reductase OS=Bacillus anthracis GN=cysH PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 8.181e-15
Identity = 54/177 (30.51%), Postives = 84/177 (47.46%), Query Frame = -2 
Query:   35 VALIEYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHFGIR--IEYMFPDAVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLRAWITGQRKDQSPGTRSEIPVVQEDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHTQGYISIGCEPCTRPVLPG 559
            + L++  +      +V  LDT     ETY    +V + F     IE      ++ Q  +    L   +E     CC++RK+ PL  +L   +AWI+G R++QS  TR     + +D  F+ ++  V  L+ W         ++W ++    +P NSLH  GY SIGCE CT PV  G
Sbjct:   41 MVLLDLINQVNPSAKVVFLDTNVHFQETYELIQKVRERFPSLNIIEKQPKLTLDEQDKLHGDKL---WESNPNLCCKIRKILPLEESLANEKAWISGLRREQSE-TRKHTKFINQDHRFQSIK--VCPLIHWT------WKEVWRYVYKHSLPYNSLHDIGYPSIGCEKCTLPVGEG 205
[Close]
BLAST of CB304947 vs. ExPASy Swiss-Prot
Match: CYSH_BACAC (Phosphoadenosine phosphosulfate reductase OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=cysH PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 8.181e-15
Identity = 54/177 (30.51%), Postives = 84/177 (47.46%), Query Frame = -2 
Query:   35 VALIEYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHFGIR--IEYMFPDAVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLRAWITGQRKDQSPGTRSEIPVVQEDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHTQGYISIGCEPCTRPVLPG 559
            + L++  +      +V  LDT     ETY    +V + F     IE      ++ Q  +    L   +E     CC++RK+ PL  +L   +AWI+G R++QS  TR     + +D  F+ ++  V  L+ W         ++W ++    +P NSLH  GY SIGCE CT PV  G
Sbjct:   41 MVLLDLINQVNPSAKVVFLDTNVHFQETYELIQKVRERFPSLNIIEKQPKLTLDEQDKLHGDKL---WESNPNLCCKIRKILPLEESLANEKAWISGLRREQSE-TRKHTKFINQDHRFQSIK--VCPLIHWT------WKEVWRYVYKHSLPYNSLHDIGYPSIGCEKCTLPVGEG 205
[Close]
BLAST of CB304947 vs. ExPASy Swiss-Prot
Match: CYSH_BACAA (Phosphoadenosine phosphosulfate reductase OS=Bacillus anthracis (strain A0248) GN=cysH PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 8.181e-15
Identity = 54/177 (30.51%), Postives = 84/177 (47.46%), Query Frame = -2 
Query:   35 VALIEYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHFGIR--IEYMFPDAVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLRAWITGQRKDQSPGTRSEIPVVQEDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHTQGYISIGCEPCTRPVLPG 559
            + L++  +      +V  LDT     ETY    +V + F     IE      ++ Q  +    L   +E     CC++RK+ PL  +L   +AWI+G R++QS  TR     + +D  F+ ++  V  L+ W         ++W ++    +P NSLH  GY SIGCE CT PV  G
Sbjct:   41 MVLLDLINQVNPSAKVVFLDTNVHFQETYELIQKVRERFPSLNIIEKQPKLTLDEQDKLHGDKL---WESNPNLCCKIRKILPLEESLANEKAWISGLRREQSE-TRKHTKFINQDHRFQSIK--VCPLIHWT------WKEVWRYVYKHSLPYNSLHDIGYPSIGCEKCTLPVGEG 205
[Close]
BLAST of CB304947 vs. ExPASy Swiss-Prot
Match: CYSH_BACC3 (Phosphoadenosine phosphosulfate reductase OS=Bacillus cereus (strain 03BB102) GN=cysH PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.069e-14
Identity = 53/163 (32.52%), Postives = 78/163 (47.85%), Query Frame = -2 
Query:   35 RVFSLDTGRLNPETYRFFDEVEKHFGIR--IEYMFPDAVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLRAWITGQRKDQSPGTRSEIPVVQEDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHTQGYISIGCEPCTRPVLPG 517
            +V  LDT     ETY    +V + F     IE      +  QA +    L   +E     CC++RK+ PL  +L   +AWI+G R++QS  TR     + +D  F+ ++  V  L+ W         ++W ++    +P N LH  GY SIGCE CT PV  G
Sbjct:   63 KVVFLDTNVHFQETYELIQKVRERFPSLNIIEKQPKLTLNEQAKLHGDKL---WESNPNLCCKIRKILPLEESLANEKAWISGLRREQSE-TRKHTKFINQDHRFQSIK--VCPLIHWT------WKEVWRYVYKHSLPYNPLHDVGYPSIGCEKCTLPVGEG 213
The following BLAST results are available for this feature:
BLAST of CB304947 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 82
Match NameE-valueIdentityDescription
CYSH_BACHK6.264e-1532.52Phosphoadenosine phosphosulfate reductase OS=Bacil... [more]
CYSH_BACCZ6.264e-1532.52Phosphoadenosine phosphosulfate reductase OS=Bacil... [more]
CYSH_BACC76.264e-1532.52Phosphoadenosine phosphosulfate reductase OS=Bacil... [more]
CYSH_XYLFT8.181e-1533.54Phosphoadenosine phosphosulfate reductase OS=Xylel... [more]
CYSH_XYLF28.181e-1533.54Phosphoadenosine phosphosulfate reductase OS=Xylel... [more]
CYSH_BACC18.181e-1532.52Phosphoadenosine phosphosulfate reductase OS=Bacil... [more]
CYSH_BACAN8.181e-1530.51Phosphoadenosine phosphosulfate reductase OS=Bacil... [more]
CYSH_BACAC8.181e-1530.51Phosphoadenosine phosphosulfate reductase OS=Bacil... [more]
CYSH_BACAA8.181e-1530.51Phosphoadenosine phosphosulfate reductase OS=Bacil... [more]
CYSH_BACC31.069e-1432.52Phosphoadenosine phosphosulfate reductase OS=Bacil... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionFLAVEDO0003_IIIaR_E09 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0003_IIIaR_E09 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304947 ID=CB304947; Name=CB304947; organism=Citrus sinensis; type=EST; length=563bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCTGTCCTGGAAGGACAGGC
CTTGTGCATGGCTCACACCCAATTGAGATGTACCCTTGTGTGTGCAAGGA
ATTGATGGGCACATCCATAGTACGAAGGAAGTTCCAAATGTCATTCCCCT
TCACATTAGCCACTGGATTCCACTTCACCAGGCTGCCAACCCCACCTTCC
AGCCCCTCAAAAACTGGATCCTCCTGGACTACAGGGATTTCAGACCTAGT
ACCTGGAGACTGATCTTTCCTTTGGCCAGTGATCCAGGCACGCAATCCCT
TGAGGGCCCTCCGAAGGGGCCTCACTTTCCTCACACGGCAGCACTCCTGG
TGCCCATCCTCATAGAAAGAGAAGAGCCCCTTGCTCCTCACTAATGCCTG
AACTTCAACAGCATCGGGAAACATGTATTCAATACGTATGCCAAAATGTT
TCTCAACTTCGTCAAAGAATCTATATGTTTCTGGGTTTAGCCTTCCAGTA
TCCAGGCTAAACACCCTAAATGGTCTACCAGTTAAATGGGCATACTCGAT
CAAAGCAACATCT
back to top