CB304947

Overview
NameCB304947
Unique NameCB304947
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length563
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig360 contig Csv1_Contig360:1..562. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB304947 vs. ExPASy Swiss-Prot
Match: CYSH_STAS1 (Phosphoadenosine phosphosulfate reductase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=cysH PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.396e-14
Identity = 53/172 (30.81%), Postives = 87/172 (50.58%), Query Frame = -2
Query:   44 LIEYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHFG-IRIEYMFPD-AVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLRAWITGQRKDQSPGTRSEIPVVQEDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHTQGYISIGCEPCTRPV 553
            LI+      +   +  LDT     ETY   D V+  +  + I+   P   +E QA   +  L+   +D +Q CC +RK++PL   L G  AW++G R++QSP +R     + +D  F+ ++  V  L+ W        +D+W++++  D+  N LH   + SIGC PCT  V
Sbjct:   56 LIDLISSVKKDAEIVFLDTNLHFQETYDLIDRVKARYPELNIKLKQPSLTLEEQADQVAPALWK--QDPNQ-CCYIRKIKPLEEVLSGATAWVSGLRREQSP-SRQATNFINKDERFKSVK--VCPLIHWT------WDDVWDYIKAHDLHYNELHDFNFPSIGCIPCTEAV 215          
BLAST of CB304947 vs. ExPASy Swiss-Prot
Match: CYSH_BACCQ (Phosphoadenosine phosphosulfate reductase OS=Bacillus cereus (strain Q1) GN=cysH PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.396e-14
Identity = 53/163 (32.52%), Postives = 78/163 (47.85%), Query Frame = -2
Query:   35 RVFSLDTGRLNPETYRFFDEVEKHFGIR--IEYMFPDAVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLRAWITGQRKDQSPGTRSEIPVVQEDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHTQGYISIGCEPCTRPVLPG 517
            +V  LDT     ETY    +V + F     IE      ++ QA +    L   +E     CC +RK+ PL  +L   +AWI+G R++QS  TR     + +D  F+ ++  V  L+ W         ++W ++    +P N LH  GY SIGCE CT PV  G
Sbjct:   63 KVVFLDTNVHFQETYELIQKVRERFPSLNIIEKQPKLTLDEQANLHGNKL---WESNPNLCCNIRKILPLEESLANEKAWISGLRREQSE-TRKHTKFINQDHRFQSIK--VCPLIHWT------WKEVWRYVYKHSLPYNPLHDIGYPSIGCEKCTLPVGEG 213          
BLAST of CB304947 vs. ExPASy Swiss-Prot
Match: CYSH_BACSK (Phosphoadenosine phosphosulfate reductase OS=Bacillus clausii (strain KSM-K16) GN=cysH PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.823e-14
Identity = 50/161 (31.06%), Postives = 82/161 (50.93%), Query Frame = -2
Query:   32 VFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLRAWITGQRKDQSPGTRSEIPVVQEDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHTQGYISIGCEPCTRPVLPGQ 514
            +  LDT     ETY   + V++ +      M   A+  +      G   + ++  Q CC++RK+  L R L+   AW++G R++QSP TR+    V +D  F+ ++  V  L+ W         +IW +++   +P N LH Q Y SIGC  CT+ V+PG+
Sbjct:   66 ILFLDTDFHFAETYELIERVKERYPTFRINMAKPALSPEEQAERYGDELWLKNPDQ-CCQIRKLDVLARELEPYDAWLSGLRREQSP-TRANTEFVNQDKRFKKVK--VCPLIHWTE------EEIWMYIKLHQLPYNELHDQHYPSIGCTYCTKAVMPGE 216          
BLAST of CB304947 vs. ExPASy Swiss-Prot
Match: CYSH_XYLFM (Phosphoadenosine phosphosulfate reductase OS=Xylella fastidiosa (strain M12) GN=cysH PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.380e-14
Identity = 53/161 (32.92%), Postives = 79/161 (49.07%), Query Frame = -2
Query:   38 VFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLRA--WITGQRKDQSPGTRSEIPVVQEDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHTQGYISIGCEPCTRPVLP 514
            V  +DTG L PETYRF D + +   + ++   P         R   L+    DG  +   + KV P+RRAL+ L+   W TG R+ QS  TR++  +VQ                K +P+ +    DIW +++  D+P + L  QGY+SIG    TRP+ P
Sbjct:   66 VILVDTGYLFPETYRFADTLTERLKLNLKVYQPLRSGTWTEARHGRLWEQGIDGINQYNTLHKVEPMRRALEELQVGTWFTGLRRGQS-STRTQTSIVQRRD----------ERYKISPIVDWTDRDIWEYMKHHDLPYHPLWEQGYVSIGDIHTTRPLEP 215          
BLAST of CB304947 vs. ExPASy Swiss-Prot
Match: CYSH_BACAH (Phosphoadenosine phosphosulfate reductase OS=Bacillus thuringiensis (strain Al Hakam) GN=cysH PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.109e-14
Identity = 52/163 (31.90%), Postives = 78/163 (47.85%), Query Frame = -2
Query:   35 RVFSLDTGRLNPETYRFFDEVEKHFGIR--IEYMFPDAVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLRAWITGQRKDQSPGTRSEIPVVQEDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHTQGYISIGCEPCTRPVLPG 517
            +V  LDT     ETY    +V + F     IE      ++ Q  +    L   +E     CC++RK+ PL  +L   +AWI+G R++QS  TR     + +D  F+ ++  V  L+ W         ++W ++    +P N LH  GY SIGCE CT PV  G
Sbjct:   63 KVVFLDTNVHFQETYELIQKVRERFPSLNIIEKQPKLTLDEQDKLHGDKL---WESNPNLCCKIRKILPLEESLANEKAWISGLRREQSE-TRKHTKFINQDHRFQSIK--VCPLIHWT------WKEVWRYVYKHSLPYNPLHDVGYPSIGCEKCTLPVGEG 213          
BLAST of CB304947 vs. ExPASy Swiss-Prot
Match: CYSH_BACC0 (Phosphoadenosine phosphosulfate reductase OS=Bacillus cereus (strain AH820) GN=cysH PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 4.060e-14
Identity = 52/163 (31.90%), Postives = 78/163 (47.85%), Query Frame = -2
Query:   35 RVFSLDTGRLNPETYRFFDEVEKHFGIR--IEYMFPDAVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLRAWITGQRKDQSPGTRSEIPVVQEDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHTQGYISIGCEPCTRPVLPG 517
            +V  LDT     ETY    +V + F     IE      ++ Q  +    L   +E     CC++RK+ PL  +L   +AWI+G R++QS  TR     + +D  F+ ++  V  L+ W         ++W ++    +P N LH  GY SIGCE CT PV  G
Sbjct:   63 KVVFLDTNVHFQETYELIQKVRERFPSLNIIEKQPKLTLDEQDKLHGDKL---WESNPNLCCKIRKILPLEESLANEKAWISGLRREQSE-TRKHTKFINQDHRFQSIK--VCPLIHWT------WKEVWRYVYKHSLPYNPLHDIGYPSIGCEKCTLPVGEG 213          
BLAST of CB304947 vs. ExPASy Swiss-Prot
Match: CYSH_THIRO (Phosphoadenosine phosphosulfate reductase OS=Thiocapsa roseopersicina GN=cysH PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.015e-13
Identity = 53/165 (32.12%), Postives = 83/165 (50.30%), Query Frame = -2
Query:   35 VFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEVQALVRSKGLFSFYE---DGHQECCRVRKVRPLRRALKGLRA--WITGQRKDQSPGTRSEIPVVQEDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHTQGYISIGCEPCTRPVLPG 514
            V  +DTG L PETYR  D +   FG+ ++   P    +    +  GL   +E   DG +   R+ K+ P+ RAL+ L A  W  G R+ Q+  +R+E+PV++               +K++P+ +        +LR  D+P + L  QGY+SIG    T P+LPG
Sbjct:   70 VILVDTGYLFPETYRLVDALTDRFGLNLKVYRP---ALSPAWQEAGLGRLWEQGADGIERYNRLNKIDPMERALRDLDAGTWFAGLRRQQA-NSRAELPVLRRQD----------GRIKFHPIIDWHRPRRARYLRRHDLPDHPLRDQGYVSIGDVHTTVPLLPG 220          
BLAST of CB304947 vs. ExPASy Swiss-Prot
Match: CYSH_BACCN (Phosphoadenosine phosphosulfate reductase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=cysH PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.015e-13
Identity = 54/163 (33.13%), Postives = 78/163 (47.85%), Query Frame = -2
Query:   44 PF-RVFSLDTGRLNPETYRFFDEVEKHFGIR--IEYMFPDAVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLRAWITGQRKDQSPGTRSEIPVVQEDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHTQGYISIGCEPCTRPV 523
            PF +V  LDT     ETY   + V + F     IE      +E Q     K L   +E     CC++RK+ PL   L    AWI+G R++QS  TR     + +D  F+ ++  +  L+ W         ++W ++   ++P N LH  GY SIGCE CT PV
Sbjct:   60 PFAQVVFLDTNVHFCETYALIERVRQRFPKLNIIEKQPGLTLEEQEDKYGKDL---WEHNPNLCCKLRKILPLEELLANKNAWISGLRREQSE-TRKHTKFINQDHRFQSIK--ICPLIHWT------WKEVWRYVYKHNLPYNPLHDVGYPSIGCEKCTLPV 210          
BLAST of CB304947 vs. ExPASy Swiss-Prot
Match: CYSH_DEIRA (Phosphoadenosine phosphosulfate reductase OS=Deinococcus radiodurans GN=cysH PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.437e-13
Identity = 56/178 (31.46%), Postives = 83/178 (46.63%), Query Frame = -2
Query:   32 VALIEYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALK--GLRAWITGQRKDQSPGTRSEIPVVQEDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHTQGYISIGCEPCTRPVLPGQ 559
            V L++ A   G    V  +DTG   PET    D +E  +    E  F       +    +     Y      CC  RKV PL+R LK  G  A +  + +DQ+  TR++IP V+E           G+  + NP+A+     +  +    D+P+N L+  G++SIGC PCTR V PG+
Sbjct:   68 VVLLDLAAQAGYRGEVVFVDTGYHFPETLATRDRLESRYP---ELTFVTLNAGASPDDGQTPPDLYASDPDACCAARKVDPLQRYLKEQGPSALLNARSRDQA-STRADIPFVEEG----------GARRRVNPLAHWTREQLEAYAAEHDLPVNPLYFDGFLSIGCWPCTRAVKPGE 231          
BLAST of CB304947 vs. ExPASy Swiss-Prot
Match: CYSH_ALISL (Phosphoadenosine phosphosulfate reductase OS=Aliivibrio salmonicida (strain LFI1238) GN=cysH PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 5.863e-13
Identity = 49/164 (29.88%), Postives = 82/164 (50.00%), Query Frame = -2
Query:   29 VFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLR--AWITGQRKDQSPGTRSEIPVVQEDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHTQGYISIGCEPCTRPVLPGQQ 514
            V   DTG L PETY+F D + +   + ++    D   +    R   L+    DG +   R+ KV+P+RRAL  L+   W +G R+DQS  +RS +P++        ++ GV    K+ PV +    ++  +L    +P + L  +GY+S+G    T+   PG +
Sbjct:   74 VILTDTGYLFPETYQFIDTLTERLNLNLQVFTADETPMWQEARYGKLWEQGVDGLKHYNRLNKVQPMRRALDQLQVGVWFSGLRRDQS-SSRSHLPIL-------SIQNGV---FKFLPVIDWSNQEVHYYLEEKGLPYHPLRDEGYLSVGDTHTTQKWEPGMK 226          
The following BLAST results are available for this feature:
BLAST of CB304947 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 82
Match NameE-valueIdentityDescription
CYSH_STAS11.396e-1430.81Phosphoadenosine phosphosulfate reductase OS=Staph... [more]
CYSH_BACCQ1.396e-1432.52Phosphoadenosine phosphosulfate reductase OS=Bacil... [more]
CYSH_BACSK1.823e-1431.06Phosphoadenosine phosphosulfate reductase OS=Bacil... [more]
CYSH_XYLFM2.380e-1432.92Phosphoadenosine phosphosulfate reductase OS=Xylel... [more]
CYSH_BACAH3.109e-1431.90Phosphoadenosine phosphosulfate reductase OS=Bacil... [more]
CYSH_BACC04.060e-1431.90Phosphoadenosine phosphosulfate reductase OS=Bacil... [more]
CYSH_THIRO2.015e-1332.12Phosphoadenosine phosphosulfate reductase OS=Thioc... [more]
CYSH_BACCN2.015e-1333.13Phosphoadenosine phosphosulfate reductase OS=Bacil... [more]
CYSH_DEIRA3.437e-1331.46Phosphoadenosine phosphosulfate reductase OS=Deino... [more]
CYSH_ALISL5.863e-1329.88Phosphoadenosine phosphosulfate reductase OS=Aliiv... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0003_IIIaR_E09 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0003_IIIaR_E09 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304947 ID=CB304947; Name=CB304947; organism=Citrus sinensis; type=EST; length=563bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCTGTCCTGGAAGGACAGGC
CTTGTGCATGGCTCACACCCAATTGAGATGTACCCTTGTGTGTGCAAGGA
ATTGATGGGCACATCCATAGTACGAAGGAAGTTCCAAATGTCATTCCCCT
TCACATTAGCCACTGGATTCCACTTCACCAGGCTGCCAACCCCACCTTCC
AGCCCCTCAAAAACTGGATCCTCCTGGACTACAGGGATTTCAGACCTAGT
ACCTGGAGACTGATCTTTCCTTTGGCCAGTGATCCAGGCACGCAATCCCT
TGAGGGCCCTCCGAAGGGGCCTCACTTTCCTCACACGGCAGCACTCCTGG
TGCCCATCCTCATAGAAAGAGAAGAGCCCCTTGCTCCTCACTAATGCCTG
AACTTCAACAGCATCGGGAAACATGTATTCAATACGTATGCCAAAATGTT
TCTCAACTTCGTCAAAGAATCTATATGTTTCTGGGTTTAGCCTTCCAGTA
TCCAGGCTAAACACCCTAAATGGTCTACCAGTTAAATGGGCATACTCGAT
CAAAGCAACATCT
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