CB304953
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304953 vs. ExPASy Swiss-Prot
Match: NLTP1_SOLPN (Non-specific lipid-transfer protein 1 OS=Solanum pennellii GN=LTP1 PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 5.240e-28 Identity = 59/111 (53.15%), Postives = 80/111 (72.07%), Query Frame = -2 Query: 269 KLVSTLVLCMLVTGPLSAQAITCGQVSGSLAPCIGFLRSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 601 K+ ++LCM+V P A+A+TCGQV+ LAPC+ +L+ GP+ CC GV+ L +A+TT DR+TAC CLK AA +I ++LN AAG+P C V+IPYKIS STDCS V+ Sbjct: 6 KIACFVLLCMVVVAP-HAEALTCGQVTAGLAPCLPYLQGRGPLG-GCCGGVKGLLGSAKTTADRKTACTCLKSAANAIKGIDLNKAAGIPSVCKVNIPYKISPSTDCSTVQ 114
BLAST of CB304953 vs. ExPASy Swiss-Prot
Match: NLTP1_LENCU (Non-specific lipid-transfer protein 1 OS=Lens culinaris PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 5.240e-28 Identity = 67/119 (56.30%), Postives = 86/119 (72.27%), Query Frame = -2 Query: 269 MAALKLVSTLV--LCMLV-TGPLSAQAITCGQVSGSLAPCIGFLRSGGPIPMP-CCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 613 MA+L+ VS LV +CM+V + P++ AI+CG VSG+L PC+ +L+ GGP P P CC GV+ LN AARTT DR+ ACNCLK +A SI L N A LPG CGV +PY ISTST+C+ +R Sbjct: 1 MASLR-VSCLVALMCMVVISAPMAEAAISCGTVSGALVPCLTYLK-GGPGPSPQCCGGVKRLNGAARTTIDRRAACNCLKSSAGSISGLKPGNVATLPGKCGVRLPYTISTSTNCNTIR 117
BLAST of CB304953 vs. ExPASy Swiss-Prot
Match: NLT2A_ORYSJ (Non-specific lipid-transfer protein 2A OS=Oryza sativa subsp. japonica GN=LTP2-A PE=3 SV=2) HSP 1 Score: 124.405 bits (311), Expect = 5.240e-28 Identity = 61/114 (53.51%), Postives = 77/114 (67.54%), Query Frame = -2 Query: 272 AALKLVSTLVLCMLVTGPLSAQA-ITCGQVSGSLAPCIGFLRSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKV 610 A L LV+ + +L+ GP + A I+CGQV+ +++PC+ + R G CC+GVRSLN+AA TT DR+TACNCLK A SI LN NAA +P CGVSIPY IS S DCS V Sbjct: 4 AQLVLVALVAAALLLAGPHTTMAAISCGQVNSAVSPCLSYARGGSGPSAACCSGVRSLNSAASTTADRRTACNCLKNVAGSISGLNAGNAASIPSKCGVSIPYTISPSIDCSSV 117
BLAST of CB304953 vs. ExPASy Swiss-Prot
Match: SCA_LILLO (Stigma/stylar cysteine-rich adhesin OS=Lilium longiflorum GN=SCA PE=1 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 6.844e-28 Identity = 66/117 (56.41%), Postives = 76/117 (64.96%), Query Frame = -2 Query: 269 MAALKLVSTLVLCMLVTGPLSAQAITCGQVSGSLAPCIGFLRSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNA--AGLPGACGVSIPYKISTSTDCSKVR 613 MA V L+L + G +A AITCGQV L C+G+ R GG IP CC GVR+LN A+TTPDRQTACNCLK PSL LN A AG+PG CGV+IPY I TDC+KVR Sbjct: 1 MARSSAVCFLLLLAFLIG--TASAITCGQVDSDLTSCLGYARKGGVIPPGCCAGVRTLNNLAKTTPDRQTACNCLKSLVN--PSLGLNAAIVAGIPGKCGVNIPYPIRMQTDCNKVR 113
BLAST of CB304953 vs. ExPASy Swiss-Prot
Match: NLTP2_SOLPN (Non-specific lipid-transfer protein 2 OS=Solanum pennellii GN=LTP2 PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 8.938e-28 Identity = 61/111 (54.95%), Postives = 78/111 (70.27%), Query Frame = -2 Query: 269 KLVSTLVLCMLVTGPLSAQAITCGQVSGSLAPCIGFLRSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 601 K+ ++LCM+V P A+A+TCGQV+ +LAPC+ +L + GP+ CC GV+ L A+TT DRQTAC CLK AA S L+L AA LP C V+IPYKIS STDCSKV+ Sbjct: 6 KIACFVLLCMVVVAP-HAEALTCGQVTSTLAPCLPYLMNRGPLG-GCCGGVKGLLGQAQTTVDRQTACTCLKSAASSFTGLDLGKAASLPSTCSVNIPYKISPSTDCSKVQ 114
BLAST of CB304953 vs. ExPASy Swiss-Prot
Match: NLT2B_ORYSJ (Non-specific lipid-transfer protein 2B OS=Oryza sativa subsp. japonica GN=LTP2-B PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.525e-27 Identity = 63/114 (55.26%), Postives = 78/114 (68.42%), Query Frame = -2 Query: 272 AALKLVSTLVLCMLVTGPLSAQA-ITCGQVSGSLAPCIGFLRSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKV 610 A L LV+ LV +L+ GP + A I+CGQV+ +++PC+ + R G CC+GVRSLN+AA TT DR+TACNCLK A SI LN NAA +P CGVSIPY IS S DCS V Sbjct: 4 AQLVLVA-LVAALLLAGPHTTMAAISCGQVNSAVSPCLSYARGGSGPSAACCSGVRSLNSAATTTADRRTACNCLKNVAGSISGLNAGNAASIPSKCGVSIPYTISPSIDCSSV 116
BLAST of CB304953 vs. ExPASy Swiss-Prot
Match: NLTP_BETVU (Non-specific lipid-transfer protein OS=Beta vulgaris GN=IWF1' PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.601e-27 Identity = 58/113 (51.33%), Postives = 76/113 (67.26%), Query Frame = -2 Query: 272 AALKLVSTLVLCMLVTGPLSAQAITCGQVSGSLAPCIGFLRSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKV 610 A +K LV+CM+V PL A+AITCG V+ LAPCIG+L+ CC G++SLN+AA + DR+TAC CLK AA SI +N AA LP CGVS+PY IS +T+C+ + Sbjct: 5 AFVKFTCALVMCMMVAAPL-AEAITCGLVASKLAPCIGYLQGAPGPSAACCGGIKSLNSAAASPADRKTACTCLKSAATSIKGINYGKAASLPRQCGVSVPYAISPNTNCNAI 116
BLAST of CB304953 vs. ExPASy Swiss-Prot
Match: NLTP2_SOLLC (Non-specific lipid-transfer protein 2 OS=Solanum lycopersicum GN=LE16 PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.396e-27 Identity = 58/111 (52.25%), Postives = 77/111 (69.37%), Query Frame = -2 Query: 269 KLVSTLVLCMLVTGPLSAQAITCGQVSGSLAPCIGFLRSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 601 K+ +V CM+V P A++++CG+V+ LAPC+ +L GP+ CC GV+ L AA+T DR+TAC CLK AA SI ++ AAGLPG CGV+IPYKIS STDCS V+ Sbjct: 6 KIACFVVFCMVVVAP-HAESLSCGEVTSGLAPCLPYLEGRGPLG-GCCGGVKGLLGAAKTPEDRKTACTCLKSAANSIKGIDTGKAAGLPGVCGVNIPYKISPSTDCSTVQ 114
BLAST of CB304953 vs. ExPASy Swiss-Prot
Match: NLTP2_SOLCI (Non-specific lipid-transfer protein 2 OS=Solanum chilense PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 5.794e-27 Identity = 60/111 (54.05%), Postives = 77/111 (69.37%), Query Frame = -2 Query: 269 KLVSTLVLCMLVTGPLSAQAITCGQVSGSLAPCIGFLRSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKVR 601 K+ ++LCM+V P A+A+TCGQV+ +LAPC+ +L + GP+ CC GV+ L A+TT DRQ AC CLK AA S L+L AA LP C V+IPYKIS STDCSKV+ Sbjct: 6 KIACFVLLCMVVVAP-HAEALTCGQVTSTLAPCLPYLMNRGPLG-GCCGGVKGLLGQAQTTVDRQAACACLKSAASSFTDLDLGKAASLPSTCNVNIPYKISPSTDCSKVQ 114
BLAST of CB304953 vs. ExPASy Swiss-Prot
Match: NLTP5_VITSX (Non-specific lipid-transfer protein P5 OS=Vitis sp. PE=1 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 7.567e-27 Identity = 53/90 (58.89%), Postives = 69/90 (76.67%), Query Frame = -2 Query: 272 ITCGQVSGSLAPCIGFLRSGGPIPMPCCNGVRSLNAAARTTPDRQTACNCLKQAARSIPSLNLNNAAGLPGACGVSIPYKISTSTDCSKV 541 ++CG V+ LAPCI +LRS GP+P+ CCNGV++L +A TT DR+TAC CL A++SI +N AAGLPG CGV+IPYKIS ST+C +V Sbjct: 1 LSCGDVATQLAPCINYLRSAGPLPVACCNGVKNLKNSAATTQDRRTACKCLINASKSISGVNFGLAAGLPGKCGVNIPYKISPSTNCDQV 90 The following BLAST results are available for this feature:
BLAST of CB304953 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304953 ID=CB304953; Name=CB304953; organism=Citrus sinensis; type=EST; length=665bpback to top |