CB304965

Overview
NameCB304965
Unique NameCB304965
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length551
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB304965 vs. ExPASy Swiss-Prot
Match: GSTF1_MAIZE (Glutathione S-transferase 1 OS=Zea mays GN=GST1 PE=1 SV=4)

HSP 1 Score: 77.411 bits (189), Expect = 5.028e-14
Identity = 39/80 (48.75%), Postives = 52/80 (65.00%), Query Frame = -1
Query:  303 VEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKVLALLK 542
            V+EN  KL K+L+VYEARL++ KYLA D  +L DL+H+     L  TP   + DA PHV AW + +  RP+  KV AL+K
Sbjct:  132 VDENLEKLKKVLEVYEARLTKCKYLAGDFLSLADLNHVSVTLCLFATPYASVLDAYPHVKAWWSGLMERPSVQKVAALMK 211          
BLAST of CB304965 vs. ExPASy Swiss-Prot
Match: GSTF2_ORYSJ (Probable glutathione S-transferase GSTF2 OS=Oryza sativa subsp. japonica GN=GSTF2 PE=1 SV=3)

HSP 1 Score: 77.0258 bits (188), Expect = 6.566e-14
Identity = 39/80 (48.75%), Postives = 52/80 (65.00%), Query Frame = -1
Query:  303 VEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKVLALLK 542
            VEEN  KL K+L+VYEARL++ KYLA D  ++ DL H+     L  TP   + DA PHV AW  D+ +RP+  KV +L+K
Sbjct:  133 VEENLEKLKKVLEVYEARLTKCKYLAGDYISVADLSHVAGTVCLGATPHASVLDAYPHVKAWWTDLMARPSSQKVASLMK 212          
BLAST of CB304965 vs. ExPASy Swiss-Prot
Match: GSTF3_ARATH (Glutathione S-transferase ERD13 OS=Arabidopsis thaliana GN=ERD13 PE=1 SV=3)

HSP 1 Score: 73.1738 bits (178), Expect = 9.482e-13
Identity = 41/79 (51.90%), Postives = 55/79 (69.62%), Query Frame = -1
Query:  312 VEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKK--LFDARPHVSAWAADITSRPAWAKVLA 542
            ++E+E KLA++LDVYEA+LS+++YLA D  +L DL HLP    L+G P+ K  L   R HVSAW   I+SR AW +V A
Sbjct:  132 IKESEEKLAEVLDVYEAQLSKNEYLAGDFVSLADLAHLPFTEYLVG-PIGKAHLIKDRKHVSAWWDKISSRAAWKEVSA 209          
BLAST of CB304965 vs. ExPASy Swiss-Prot
Match: GSTF7_ARATH (Glutathione S-transferase OS=Arabidopsis thaliana GN=At3g03190 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.706e-12
Identity = 34/81 (41.98%), Postives = 53/81 (65.43%), Query Frame = -1
Query:  309 AAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLG-TPVKKLFDARPHVSAWAADITSRPAWAKVLAL 548
            A VEE + K  K+LDVYE RL+ ++YL  D FTL DL H+P +  ++  T +  L  +R +++ W  +I++RPAW K++ L
Sbjct:  131 ALVEELKVKFDKVLDVYENRLATNRYLGGDEFTLADLSHMPGMRYIMNETSLSGLVTSRENLNRWWNEISARPAWKKLMEL 211          
BLAST of CB304965 vs. ExPASy Swiss-Prot
Match: GSTF3_MAIZE (Glutathione S-transferase 3 OS=Zea mays GN=GST3 PE=1 SV=4)

HSP 1 Score: 68.9366 bits (167), Expect = 1.788e-11
Identity = 41/91 (45.05%), Postives = 54/91 (59.34%), Query Frame = -1
Query:  279 AAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKK-LFDARPHVSAWAADITSRPAWAKVLALLKH*TLCPLP 548
            A VE++  +LAK+LDVYEA L+++KYLA D FTL D +H     L    P +     ARPHV AW   I +RPA+ K +A +      PLP
Sbjct:  131 AVVEKHAEQLAKVLDVYEAHLARNKYLAGDEFTLADANHALLPALTSARPPRPGCVAARPHVKAWWEAIAARPAFQKTVAAI------PLP 215          
BLAST of CB304965 vs. ExPASy Swiss-Prot
Match: GSTF1_WHEAT (Glutathione S-transferase 1 OS=Triticum aestivum GN=GSTA1 PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 8.875e-11
Identity = 33/75 (44.00%), Postives = 47/75 (62.67%), Query Frame = -1
Query:  318 VEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKV 542
            V+E+  +L  +L +YEARL +S+YLA DS T  DL+H+P     + TP  K+FD  P V AW   + +RPA  +V
Sbjct:  141 VDESLERLRGVLGIYEARLEKSRYLAGDSITFADLNHIPFTFYFMTTPYAKVFDDYPKVKAWWEMLMARPAVQRV 215          
The following BLAST results are available for this feature:
BLAST of CB304965 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
GSTF1_MAIZE5.028e-1448.75Glutathione S-transferase 1 OS=Zea mays GN=GST1 PE... [more]
GSTF2_ORYSJ6.566e-1448.75Probable glutathione S-transferase GSTF2 OS=Oryza ... [more]
GSTF3_ARATH9.482e-1351.90Glutathione S-transferase ERD13 OS=Arabidopsis tha... [more]
GSTF7_ARATH4.706e-1241.98Glutathione S-transferase OS=Arabidopsis thaliana ... [more]
GSTF3_MAIZE1.788e-1145.05Glutathione S-transferase 3 OS=Zea mays GN=GST3 PE... [more]
GSTF1_WHEAT8.875e-1144.00Glutathione S-transferase 1 OS=Triticum aestivum G... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0003_IIIaR_H04 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0003_IIIaR_H04 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304965 ID=CB304965; Name=CB304965; organism=Citrus sinensis; type=EST; length=551bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGCGCAGAATATCTCCAGC
TTCGTTTTATTAGGGTACATAAATAAAATAAAAACCTCAAGCCATCAACA
TCAAAGTTGAATATGAGGCAGTGCTGTTGAAATACAAAAGCGGTAGTACA
AACTACAAAGCATCAATATTCTGCAGAATATTGATGACAAACGCCAAACA
AGAGAATACGAACTCGAAAACCAGCCTAATAGGTATTACAAAAGATAAGT
GACCACCGAGGAGCGACTAACGTCTAGTAGGTAGCGGGCAGAGCGTTCAG
TGTTTGAGCAAGGCAAGGACCTTAGCCCAAGCCGGTCTGGAAGTGATATC
AGCTGCCCATGCGCTAACATGGGGGCGTGCATCAAACAGCTTCTTGACAG
GCGTCCCCAACAACAAATTAATATTGGGGAGATGATGCAAATCGACCAAG
GTGAAGCTGTCGCACGCCAAGTATTTGGACTGAGACAAACGGGCCTCGTA
AACATCTAAAATTTTGGCAAGCTTAGCTTCATTTTCTTCAACCGCAGCTG
G
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