CB304972
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304972 vs. ExPASy Swiss-Prot
Match: LET12_SOLLC (Homeobox protein knotted-1-like LET12 OS=Solanum lycopersicum GN=LET12 PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 8.322e-22 Identity = 43/49 (87.76%), Postives = 46/49 (93.88%), Query Frame = -2 Query: 397 VLKTWWQQHSKWPYPTEDDKAKLVEETGLQLKQIINWFINQRKRNWHSN 543 VLK WWQ HSKWPYPTE+DKA+LV+ETGLQLKQI NWFINQRKRNWHSN Sbjct: 363 VLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSN 411
BLAST of CB304972 vs. ExPASy Swiss-Prot
Match: KNOSB_ORYSJ (Homeobox protein knotted-1-like 11 OS=Oryza sativa subsp. japonica GN=HOS59 PE=2 SV=2) HSP 1 Score: 101.293 bits (251), Expect = 3.162e-21 Identity = 42/48 (87.50%), Postives = 45/48 (93.75%), Query Frame = -2 Query: 397 LKTWWQQHSKWPYPTEDDKAKLVEETGLQLKQIINWFINQRKRNWHSN 540 LK WWQ HSKWPYPTE+DKA+LV+ETGLQLKQI NWFINQRKRNWHSN Sbjct: 251 LKAWWQAHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSN 298
BLAST of CB304972 vs. ExPASy Swiss-Prot
Match: KNOSD_ORYSJ (Homeobox protein knotted-1-like 13 OS=Oryza sativa subsp. japonica GN=OSH45 PE=2 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 4.130e-21 Identity = 42/53 (79.25%), Postives = 46/53 (86.79%), Query Frame = -2 Query: 382 LKTWWQQHSKWPYPTEDDKAKLVEETGLQLKQIINWFINQRKRNWHSNSQXVT 540 LK WWQ H+KWPYPTE+DKA+LV+ETGLQLKQI NWFINQRKRNWHSN T Sbjct: 307 LKAWWQSHAKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNPSSST 359
BLAST of CB304972 vs. ExPASy Swiss-Prot
Match: KNAT5_ARATH (Homeobox protein knotted-1-like 5 OS=Arabidopsis thaliana GN=KNAT5 PE=1 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 4.130e-21 Identity = 43/50 (86.00%), Postives = 47/50 (94.00%), Query Frame = -2 Query: 394 VLKTWWQQHSKWPYPTEDDKAKLVEETGLQLKQIINWFINQRKRNWHSNS 543 VLK WW+ HSKWPYPTE+DKAKLV+ETGLQLKQI NWFINQRKRNW+SNS Sbjct: 317 VLKEWWRTHSKWPYPTEEDKAKLVQETGLQLKQINNWFINQRKRNWNSNS 366
BLAST of CB304972 vs. ExPASy Swiss-Prot
Match: KNOX2_MAIZE (Homeobox protein knotted-1-like 2 (Fragment) OS=Zea mays GN=KNOX2 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 7.045e-21 Identity = 41/48 (85.42%), Postives = 45/48 (93.75%), Query Frame = -2 Query: 397 LKTWWQQHSKWPYPTEDDKAKLVEETGLQLKQIINWFINQRKRNWHSN 540 LK WWQ HSKWPYPTE+DKA+LV+ETGLQLKQI NWFINQRKRNWH+N Sbjct: 41 LKAWWQAHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHNN 88
BLAST of CB304972 vs. ExPASy Swiss-Prot
Match: KNAT2_ARATH (Homeobox protein knotted-1-like 2 OS=Arabidopsis thaliana GN=KNAT2 PE=1 SV=3) HSP 1 Score: 77.411 bits (189), Expect = 4.890e-14 Identity = 32/45 (71.11%), Postives = 34/45 (75.56%), Query Frame = -2 Query: 406 LKTWWQQHSKWPYPTEDDKAKLVEETGLQLKQIINWFINQRKRNW 540 L WW H+KWPYPTE DK L EETGL KQI NWFINQRKR+W Sbjct: 245 LLDWWNVHNKWPYPTEGDKISLAEETGLDQKQINNWFINQRKRHW 289
BLAST of CB304972 vs. ExPASy Swiss-Prot
Match: KN1_MAIZE (Homeotic protein knotted-1 OS=Zea mays GN=KN-1 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 8.341e-14 Identity = 31/50 (62.00%), Postives = 36/50 (72.00%), Query Frame = -2 Query: 391 LKTWWQQHSKWPYPTEDDKAKLVEETGLQLKQIINWFINQRKRNWHSNSQ 540 L +WW QH KWPYP+E K L E TGL LKQI NWFINQRKR+W + + Sbjct: 279 LLSWWDQHYKWPYPSETQKVALAESTGLDLKQINNWFINQRKRHWKPSEE 328
BLAST of CB304972 vs. ExPASy Swiss-Prot
Match: KNOX3_HORVU (Homeobox protein KNOX3 OS=Hordeum vulgare GN=KNOX3 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.858e-13 Identity = 30/45 (66.67%), Postives = 34/45 (75.56%), Query Frame = -2 Query: 406 LKTWWQQHSKWPYPTEDDKAKLVEETGLQLKQIINWFINQRKRNW 540 L +WW+ H KWPYP+E K L E TGL LKQI NWFINQRKR+W Sbjct: 283 LLSWWEMHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHW 327
BLAST of CB304972 vs. ExPASy Swiss-Prot
Match: KNOS6_ORYSJ (Homeobox protein knotted-1-like 6 OS=Oryza sativa subsp. japonica GN=OSH1 PE=2 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 3.170e-13 Identity = 30/50 (60.00%), Postives = 35/50 (70.00%), Query Frame = -2 Query: 391 LKTWWQQHSKWPYPTEDDKAKLVEETGLQLKQIINWFINQRKRNWHSNSQ 540 L WW+ H KWPYP+E K L E TGL LKQI NWFINQRKR+W + + Sbjct: 279 LLNWWELHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPSDE 328
BLAST of CB304972 vs. ExPASy Swiss-Prot
Match: KNAT1_ARATH (Homeobox protein knotted-1-like 1 OS=Arabidopsis thaliana GN=KNAT1 PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 3.170e-13 Identity = 30/45 (66.67%), Postives = 34/45 (75.56%), Query Frame = -2 Query: 406 LKTWWQQHSKWPYPTEDDKAKLVEETGLQLKQIINWFINQRKRNW 540 L TWW+ H KWPYP+E +K L E TGL KQI NWFINQRKR+W Sbjct: 316 LLTWWELHYKWPYPSESEKVALAESTGLDQKQINNWFINQRKRHW 360 The following BLAST results are available for this feature:
BLAST of CB304972 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 44
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304972 ID=CB304972; Name=CB304972; organism=Citrus sinensis; type=EST; length=544bpback to top |