CB304972
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304972 vs. ExPASy Swiss-Prot
Match: KN1_SOLLC (Homeotic protein knotted-1 OS=Solanum lycopersicum GN=KN1 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 4.140e-13 Identity = 30/45 (66.67%), Postives = 34/45 (75.56%), Query Frame = -2 Query: 406 LKTWWQQHSKWPYPTEDDKAKLVEETGLQLKQIINWFINQRKRNW 540 L TWW+ H KWPYP+E +K L E TGL KQI NWFINQRKR+W Sbjct: 273 LITWWELHYKWPYPSESEKVALAESTGLDQKQINNWFINQRKRHW 317
BLAST of CB304972 vs. ExPASy Swiss-Prot
Match: HLG3_MAIZE (Homeobox protein liguleless 3 (Fragment) OS=Zea mays GN=LG3 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 5.406e-13 Identity = 30/46 (65.22%), Postives = 34/46 (73.91%), Query Frame = -2 Query: 406 VLKTWWQQHSKWPYPTEDDKAKLVEETGLQLKQIINWFINQRKRNW 543 VL WW H +WPYPTE+DK +L TGL KQI NWFINQRKR+W Sbjct: 37 VLLEWWNTHYRWPYPTEEDKVRLAAMTGLDPKQINNWFINQRKRHW 82
BLAST of CB304972 vs. ExPASy Swiss-Prot
Match: KNX11_MAIZE (Homeobox protein knotted-1-like 11 (Fragment) OS=Zea mays GN=KNOX11 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 9.222e-13 Identity = 29/45 (64.44%), Postives = 33/45 (73.33%), Query Frame = -2 Query: 406 LKTWWQQHSKWPYPTEDDKAKLVEETGLQLKQIINWFINQRKRNW 540 L WW H +WPYPTE+DK +L TGL KQI NWFINQRKR+W Sbjct: 41 LMDWWNTHYRWPYPTEEDKVRLAAATGLDPKQINNWFINQRKRHW 85
BLAST of CB304972 vs. ExPASy Swiss-Prot
Match: KNX10_MAIZE (Homeobox protein knotted-1-like 10 (Fragment) OS=Zea mays GN=KNOX10 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 9.222e-13 Identity = 29/42 (69.05%), Postives = 34/42 (80.95%), Query Frame = -2 Query: 406 WWQQHSKWPYPTEDDKAKLVEETGLQLKQIINWFINQRKRNW 531 WWQ H +WPYP+E +KA L E TGL+ KQI NWFINQRKR+W Sbjct: 44 WWQLHYRWPYPSELEKAALAESTGLEAKQINNWFINQRKRHW 85
BLAST of CB304972 vs. ExPASy Swiss-Prot
Match: KNAP2_MALDO (Homeobox protein knotted-1-like 2 OS=Malus domestica PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 9.222e-13 Identity = 29/45 (64.44%), Postives = 34/45 (75.56%), Query Frame = -2 Query: 406 LKTWWQQHSKWPYPTEDDKAKLVEETGLQLKQIINWFINQRKRNW 540 L +WW+ H KWPYP+E +K L E TGL KQI NWFINQRKR+W Sbjct: 316 LLSWWELHYKWPYPSESEKVALAESTGLDQKQINNWFINQRKRHW 360
BLAST of CB304972 vs. ExPASy Swiss-Prot
Match: KNAP1_MALDO (Homeobox protein knotted-1-like 1 OS=Malus domestica PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 9.222e-13 Identity = 29/45 (64.44%), Postives = 34/45 (75.56%), Query Frame = -2 Query: 406 LKTWWQQHSKWPYPTEDDKAKLVEETGLQLKQIINWFINQRKRNW 540 L +WW+ H KWPYP+E +K L E TGL KQI NWFINQRKR+W Sbjct: 317 LLSWWELHYKWPYPSESEKVALAESTGLDQKQINNWFINQRKRHW 361
BLAST of CB304972 vs. ExPASy Swiss-Prot
Match: KNOX5_MAIZE (Homeobox protein knotted-1-like 5 (Fragment) OS=Zea mays GN=KNOX5 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.204e-12 Identity = 29/45 (64.44%), Postives = 33/45 (73.33%), Query Frame = -2 Query: 406 LKTWWQQHSKWPYPTEDDKAKLVEETGLQLKQIINWFINQRKRNW 540 L WW H +WPYPTE+DK +L TGL KQI NWFINQRKR+W Sbjct: 38 LMDWWNTHYRWPYPTEEDKVRLAAMTGLDPKQINNWFINQRKRHW 82
BLAST of CB304972 vs. ExPASy Swiss-Prot
Match: KNOSA_ORYSJ (Homeobox protein knotted-1-like 10 OS=Oryza sativa subsp. japonica GN=OSH71 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.204e-12 Identity = 29/45 (64.44%), Postives = 33/45 (73.33%), Query Frame = -2 Query: 406 LKTWWQQHSKWPYPTEDDKAKLVEETGLQLKQIINWFINQRKRNW 540 L WW H +WPYPTE+DK +L TGL KQI NWFINQRKR+W Sbjct: 234 LMDWWNTHYRWPYPTEEDKVRLAAMTGLDPKQINNWFINQRKRHW 278
BLAST of CB304972 vs. ExPASy Swiss-Prot
Match: KNOSA_ORYSI (Homeobox protein knotted-1-like 10 OS=Oryza sativa subsp. indica GN=OSH71 PE=2 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 1.204e-12 Identity = 29/45 (64.44%), Postives = 33/45 (73.33%), Query Frame = -2 Query: 406 LKTWWQQHSKWPYPTEDDKAKLVEETGLQLKQIINWFINQRKRNW 540 L WW H +WPYPTE+DK +L TGL KQI NWFINQRKR+W Sbjct: 234 LMDWWNTHYRWPYPTEEDKVRLAAMTGLDPKQINNWFINQRKRHW 278
BLAST of CB304972 vs. ExPASy Swiss-Prot
Match: KNOS1_ORYSJ (Homeobox protein knotted-1-like 1 OS=Oryza sativa subsp. japonica GN=OSH6 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.204e-12 Identity = 29/45 (64.44%), Postives = 33/45 (73.33%), Query Frame = -2 Query: 406 LKTWWQQHSKWPYPTEDDKAKLVEETGLQLKQIINWFINQRKRNW 540 L WW H +WPYPTE+DK +L TGL KQI NWFINQRKR+W Sbjct: 225 LLEWWNTHYRWPYPTEEDKLRLAARTGLDPKQINNWFINQRKRHW 269 The following BLAST results are available for this feature:
BLAST of CB304972 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 44
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CB304972 ID=CB304972; Name=CB304972; organism=Citrus sinensis; type=EST; length=544bpback to top |