CB304972
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304972 vs. ExPASy Swiss-Prot
Match: KNOS4_ORYSJ (Homeobox protein knotted-1-like 4 OS=Oryza sativa subsp. japonica GN=OSH10 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.573e-12 Identity = 29/42 (69.05%), Postives = 33/42 (78.57%), Query Frame = -2 Query: 406 WWQQHSKWPYPTEDDKAKLVEETGLQLKQIINWFINQRKRNW 531 WWQ H +WPYP+E +KA L E TGL KQI NWFINQRKR+W Sbjct: 240 WWQLHYRWPYPSELEKAALAESTGLDAKQINNWFINQRKRHW 281
BLAST of CB304972 vs. ExPASy Swiss-Prot
Match: KNAT6_ARATH (Homeobox protein knotted-1-like 6 OS=Arabidopsis thaliana GN=KNAT6 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.573e-12 Identity = 30/45 (66.67%), Postives = 32/45 (71.11%), Query Frame = -2 Query: 406 LKTWWQQHSKWPYPTEDDKAKLVEETGLQLKQIINWFINQRKRNW 540 L WW H KWPYPTE DK L + TGL KQI NWFINQRKR+W Sbjct: 261 LLDWWNLHYKWPYPTEGDKIALADATGLDQKQINNWFINQRKRHW 305
BLAST of CB304972 vs. ExPASy Swiss-Prot
Match: STM_BRAOL (Homeobox protein SHOOT MERISTEMLESS OS=Brassica oleracea GN=STM PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.683e-12 Identity = 29/45 (64.44%), Postives = 32/45 (71.11%), Query Frame = -2 Query: 406 LKTWWQQHSKWPYPTEDDKAKLVEETGLQLKQIINWFINQRKRNW 540 L WW +H KWPYP+E K L E TGL KQI NWFINQRKR+W Sbjct: 300 LLDWWSRHYKWPYPSEQQKLALAESTGLDQKQINNWFINQRKRHW 344
BLAST of CB304972 vs. ExPASy Swiss-Prot
Match: STM_ARATH (Homeobox protein SHOOT MERISTEMLESS OS=Arabidopsis thaliana GN=STM PE=1 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 2.683e-12 Identity = 29/45 (64.44%), Postives = 32/45 (71.11%), Query Frame = -2 Query: 406 LKTWWQQHSKWPYPTEDDKAKLVEETGLQLKQIINWFINQRKRNW 540 L WW +H KWPYP+E K L E TGL KQI NWFINQRKR+W Sbjct: 299 LLDWWSRHYKWPYPSEQQKLALAESTGLDQKQINNWFINQRKRHW 343
BLAST of CB304972 vs. ExPASy Swiss-Prot
Match: KNOS5_ORYSJ (Putative homeobox protein knotted-1-like 5 OS=Oryza sativa subsp. japonica GN=Os03g0673500 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.683e-12 Identity = 28/45 (62.22%), Postives = 33/45 (73.33%), Query Frame = -2 Query: 406 LKTWWQQHSKWPYPTEDDKAKLVEETGLQLKQIINWFINQRKRNW 540 L WW H +WPYP+E +KA L E TGL KQ+ NWFINQRKR+W Sbjct: 244 LLQWWHLHYRWPYPSEAEKAALAESTGLDKKQVTNWFINQRKRHW 288
BLAST of CB304972 vs. ExPASy Swiss-Prot
Match: HSBH1_SOYBN (Homeobox protein SBH1 OS=Glycine max GN=H1 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.683e-12 Identity = 29/45 (64.44%), Postives = 32/45 (71.11%), Query Frame = -2 Query: 406 LKTWWQQHSKWPYPTEDDKAKLVEETGLQLKQIINWFINQRKRNW 540 L WW +H KWPYP+E K L E TGL KQI NWFINQRKR+W Sbjct: 298 LLEWWNRHYKWPYPSESQKLALAESTGLDQKQINNWFINQRKRHW 342
BLAST of CB304972 vs. ExPASy Swiss-Prot
Match: RSH1_MAIZE (Homeobox protein rough sheath 1 OS=Zea mays GN=RS1 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.504e-12 Identity = 28/42 (66.67%), Postives = 32/42 (76.19%), Query Frame = -2 Query: 406 WWQQHSKWPYPTEDDKAKLVEETGLQLKQIINWFINQRKRNW 531 WW+ H KWPYP+E +K L E TGL KQI NWFINQRKR+W Sbjct: 272 WWELHYKWPYPSETEKIALAESTGLDQKQINNWFINQRKRHW 313
BLAST of CB304972 vs. ExPASy Swiss-Prot
Match: KNOX3_MAIZE (Homeobox protein knotted-1-like 3 (Fragment) OS=Zea mays GN=KNOX3 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.504e-12 Identity = 28/45 (62.22%), Postives = 35/45 (77.78%), Query Frame = -2 Query: 406 LKTWWQQHSKWPYPTEDDKAKLVEETGLQLKQIINWFINQRKRNW 540 L +WW+ H +WPYP+E +K L E TGL+ KQI NWFINQRKR+W Sbjct: 41 LLSWWELHYRWPYPSEMEKIALAESTGLEQKQINNWFINQRKRHW 85
BLAST of CB304972 vs. ExPASy Swiss-Prot
Match: KNOSC_ORYSJ (Homeobox protein knotted-1-like 12 OS=Oryza sativa subsp. japonica GN=OSH15 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.504e-12 Identity = 28/42 (66.67%), Postives = 32/42 (76.19%), Query Frame = -2 Query: 406 WWQQHSKWPYPTEDDKAKLVEETGLQLKQIINWFINQRKRNW 531 WW+ H KWPYP+E +K L E TGL KQI NWFINQRKR+W Sbjct: 276 WWELHYKWPYPSETEKIALAESTGLDQKQINNWFINQRKRHW 317
BLAST of CB304972 vs. ExPASy Swiss-Prot
Match: KNOSC_ORYSI (Homeobox protein knotted-1-like 12 OS=Oryza sativa subsp. indica GN=OSH15 PE=2 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 3.504e-12 Identity = 28/42 (66.67%), Postives = 32/42 (76.19%), Query Frame = -2 Query: 406 WWQQHSKWPYPTEDDKAKLVEETGLQLKQIINWFINQRKRNW 531 WW+ H KWPYP+E +K L E TGL KQI NWFINQRKR+W Sbjct: 276 WWELHYKWPYPSETEKIALAESTGLDQKQINNWFINQRKRHW 317 The following BLAST results are available for this feature:
BLAST of CB304972 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 44
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CB304972 ID=CB304972; Name=CB304972; organism=Citrus sinensis; type=EST; length=544bpback to top |