CB304976
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304976 vs. ExPASy Swiss-Prot
Match: RL11_LEIMA (60S ribosomal protein L11 OS=Leishmania major GN=RPL11 PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 5.908e-32 Identity = 70/113 (61.95%), Postives = 80/113 (70.80%), Query Frame = -2 Query: 240 IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSGTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXGIQHRVTKEDAMKWFQVKYEGVI 578 IRRNEKIA + TVRG KA +LLE GLKVKE+EL NF+ TG FGFGI EHIDLGIKYDPSTGIYGMDF+VVL G H VTKE+AMKWF+ ++G+I Sbjct: 61 IRRNEKIAVHCTVRGKKAEELLEKGLKVKEFELKSYNFADTGSFGFGIDEHIDLGIKYDPSTGIYGMDFYVVLGRRGERVAHRKRKCSRVGHSHHVTKEEAMKWFEKVHDGII 173
BLAST of CB304976 vs. ExPASy Swiss-Prot
Match: RL11B_YEAST (60S ribosomal protein L11-B OS=Saccharomyces cerevisiae GN=RPL11B PE=1 SV=3) HSP 1 Score: 136.346 bits (342), Expect = 1.008e-31 Identity = 68/116 (58.62%), Postives = 81/116 (69.83%), Query Frame = -2 Query: 231 IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSGTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXGIQHRVTKEDAMKWFQVKYEGVILNK 578 IRRNEKIA +VTVRG KA ++LE GLKVKEY+L RNFS TG FGFGI EHIDLGIKYDPS GI+GMDF+VV+ G H+ TKED + WF+ KY+ +L+K Sbjct: 59 IRRNEKIAVHVTVRGPKAEEILERGLKVKEYQLRDRNFSATGNFGFGIDEHIDLGIKYDPSIGIFGMDFYVVMNRPGARVTRRKRCKGTVGNSHKTTKEDTVSWFKQKYDADVLDK 174
BLAST of CB304976 vs. ExPASy Swiss-Prot
Match: RL11A_YEAST (60S ribosomal protein L11-A OS=Saccharomyces cerevisiae GN=RPL11A PE=1 SV=2) HSP 1 Score: 136.346 bits (342), Expect = 1.008e-31 Identity = 68/116 (58.62%), Postives = 81/116 (69.83%), Query Frame = -2 Query: 231 IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSGTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXGIQHRVTKEDAMKWFQVKYEGVILNK 578 IRRNEKIA +VTVRG KA ++LE GLKVKEY+L RNFS TG FGFGI EHIDLGIKYDPS GI+GMDF+VV+ G H+ TKED + WF+ KY+ +L+K Sbjct: 59 IRRNEKIAVHVTVRGPKAEEILERGLKVKEYQLRDRNFSATGNFGFGIDEHIDLGIKYDPSIGIFGMDFYVVMNRPGARVTRRKRCKGTVGNSHKTTKEDTVSWFKQKYDADVLDK 174
BLAST of CB304976 vs. ExPASy Swiss-Prot
Match: RL11_CANGA (60S ribosomal protein L11 OS=Candida glabrata GN=RPL11 PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 5.001e-31 Identity = 66/116 (56.90%), Postives = 82/116 (70.69%), Query Frame = -2 Query: 231 IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSGTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXGIQHRVTKEDAMKWFQVKYEGVILNK 578 IRRNEKIA +VTVRG KA ++LE GLKVKEY+L RNFS TG FGFGIQEHIDLGIKYDPS GI+GMDF++V+ G H+ +KED + WF+ +Y+ +L+K Sbjct: 59 IRRNEKIAVHVTVRGPKAEEILERGLKVKEYQLRNRNFSTTGNFGFGIQEHIDLGIKYDPSIGIFGMDFYIVMGRPGNRIARRKRCRATVGNSHKTSKEDTIAWFKQRYDADVLDK 174
BLAST of CB304976 vs. ExPASy Swiss-Prot
Match: RL11_ASHGO (60S ribosomal protein L11 OS=Ashbya gossypii GN=RPL11 PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.114e-30 Identity = 65/116 (56.03%), Postives = 82/116 (70.69%), Query Frame = -2 Query: 231 IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSGTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXGIQHRVTKEDAMKWFQVKYEGVILNK 578 IRRNEKIA +VT+RG K+ ++LE GLKVKEY+L +NFS TG FGFGIQEHIDLGIKYDPS GIYGMDF+VV+ G H+ +KED + WF+ +Y+ +L+K Sbjct: 59 IRRNEKIAVHVTIRGPKSEEILERGLKVKEYQLRTKNFSETGNFGFGIQEHIDLGIKYDPSIGIYGMDFYVVMGRPGGRVSRRKRCRSTVGNSHKTSKEDTIAWFKQRYDADVLDK 174
BLAST of CB304976 vs. ExPASy Swiss-Prot
Match: RL11_NEUCR (60S ribosomal protein L11 OS=Neurospora crassa GN=rpl-11 PE=3 SV=2) HSP 1 Score: 130.954 bits (328), Expect = 4.234e-30 Identity = 62/113 (54.87%), Postives = 79/113 (69.91%), Query Frame = -2 Query: 240 IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSGTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXGIQHRVTKEDAMKWFQVKYEGVI 578 IRRNEKI+ +VTVRG KA ++LE GLKVKEYEL +RNFS TG FGFGI EHIDLGIKYDP GIYGMDF+ + G HR+T++D +KWF+ +++ ++ Sbjct: 61 IRRNEKISVHVTVRGPKAEEILERGLKVKEYELRKRNFSETGNFGFGISEHIDLGIKYDPGIGIYGMDFYCCMTRPGERVSRRRRAKSRVGATHRITRDDTVKWFKSRFDAIV 173
BLAST of CB304976 vs. ExPASy Swiss-Prot
Match: RL11_TETTH (60S ribosomal protein L11 OS=Tetrahymena thermophila GN=RPL11 PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 1.609e-29 Identity = 62/111 (55.86%), Postives = 79/111 (71.17%), Query Frame = -2 Query: 246 IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSGTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXGIQHRVTKEDAMKWFQVKYEG 578 I+RNEK+A +VT+RGDKA +L GLKVKE EL ++NFS TG FGFGIQEHIDLG+KYDPSTGI+GMDF+VVLE G ++KE+ + WF+ ++EG Sbjct: 59 IKRNEKMAVHVTIRGDKARDILTRGLKVKEMELRKKNFSNTGNFGFGIQEHIDLGMKYDPSTGIFGMDFYVVLERPGTRVARRRRATSRVGNNQMISKEECINWFKTEFEG 169
BLAST of CB304976 vs. ExPASy Swiss-Prot
Match: RL11_ENCCU (60S ribosomal protein L11 OS=Encephalitozoon cuniculi GN=RPL11 PE=1 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.153e-27 Identity = 62/114 (54.39%), Postives = 75/114 (65.79%), Query Frame = -2 Query: 237 IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSGTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXGIQHRVTKEDAMKWFQVKYEGVIL 578 IRRNEKIA +V V G KA +LL + L+VKEYEL FS GCFGFGI+EHIDLG+KYDP+ GI+GMDFFV+L G + RV EDA KWF +EGV++ Sbjct: 51 IRRNEKIAVHVNVSGKKAYELLNTALRVKEYELKESCFSNNGCFGFGIEEHIDLGLKYDPNIGIFGMDFFVILARPGDRVSKRKRCKSRVGNKQRVYAEDAKKWFVENFEGVLV 164
BLAST of CB304976 vs. ExPASy Swiss-Prot
Match: RL11_TOXCA (60S ribosomal protein L11 (Fragment) OS=Toxocara canis GN=RPL11 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 7.011e-17 Identity = 42/57 (73.68%), Postives = 47/57 (82.46%), Query Frame = -2 Query: 408 IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSGTGCFGFGIQEHIDLGIK 578 IRRNEKIA + TVRG KA ++LE GLKVKEYEL + NFS TG FG G+QEHIDLGIK Sbjct: 69 IRRNEKIAVHCTVRGPKAEEILEKGLKVKEYELYKENFSDTGNFGLGVQEHIDLGIK 125
BLAST of CB304976 vs. ExPASy Swiss-Prot
Match: RL5_ARCFU (50S ribosomal protein L5P OS=Archaeoglobus fulgidus GN=rpl5p PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.196e-16 Identity = 47/107 (43.93%), Postives = 61/107 (57.01%), Query Frame = -2 Query: 261 IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSGTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXGIQHRVTKEDAMKWFQ 578 IR+ E I VT+RG+KA++ L+ L VKE L R++ G G F FGI EHIDL G+ YDP GI+GMD V L+ HRVTKED ++W + Sbjct: 66 IRKGEAIGIKVTLRGEKALKFLKDALTVKENRLSRKSI-GEGYFAFGIAEHIDLPGVDYDPDVGIFGMDVCVSLKRRGYRVARRRRKKAKIATSHRVTKEDTIRWLE 171 The following BLAST results are available for this feature:
BLAST of CB304976 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 51
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304976 ID=CB304976; Name=CB304976; organism=Citrus sinensis; type=EST; length=579bpback to top |