CB304986

Overview
NameCB304986
Unique NameCB304986
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length656
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4289 contig Csv1_Contig4289:468..1123. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CB304986 vs. ExPASy Swiss-Prot
Match: ATG8_NEOFI (Autophagy-related protein 8 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=atg8 PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.224e-45
Identity = 88/115 (76.52%), Postives = 100/115 (86.96%), Query Frame = -3 
Query:  277 KSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIDKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFG 621
            +S FK EHP E+R AE+ RIR+KY DRIPVI EK EK+D+  IDKKKYLVPADL+VGQFVYV+RKRIKLS EKAIF+FV   LPPT ALMS+IYEE+KDEDGFLY+TYSGENTFG
Sbjct:    2 RSKFKDEHPFEKRKAEAERIRQKYADRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116
[Close]
BLAST of CB304986 vs. ExPASy Swiss-Prot
Match: ATG8_COLLN (Autophagy-related protein 8 OS=Colletotrichum lindemuthianum GN=ATG8 PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.224e-45
Identity = 88/115 (76.52%), Postives = 100/115 (86.96%), Query Frame = -3 
Query:  277 KSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIDKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFG 621
            +S FK EHP E+R AE+ RIR+KY DRIPVI EK EK+D+  IDKKKYLVPADL+VGQFVYV+RKRIKLS EKAIF+FV   LPPT ALMS+IYEE+KDEDGFLY+TYSGENTFG
Sbjct:    2 RSKFKDEHPFEKRKAEAERIRQKYSDRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116
[Close]
BLAST of CB304986 vs. ExPASy Swiss-Prot
Match: ATG8_ASPTN (Autophagy-related protein 8 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=atg8 PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.224e-45
Identity = 88/115 (76.52%), Postives = 100/115 (86.96%), Query Frame = -3 
Query:  277 KSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIDKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFG 621
            +S FK EHP E+R AE+ RIR+KY DRIPVI EK EK+D+  IDKKKYLVPADL+VGQFVYV+RKRIKLS EKAIF+FV   LPPT ALMS+IYEE+KDEDGFLY+TYSGENTFG
Sbjct:    2 RSKFKDEHPFEKRKAEAERIRQKYADRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116
[Close]
BLAST of CB304986 vs. ExPASy Swiss-Prot
Match: ATG8_ASPOR (Autophagy-related protein 8 OS=Aspergillus oryzae GN=atg8 PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.224e-45
Identity = 88/115 (76.52%), Postives = 100/115 (86.96%), Query Frame = -3 
Query:  277 KSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIDKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFG 621
            +S FK EHP E+R AE+ RIR+KY DRIPVI EK EK+D+  IDKKKYLVPADL+VGQFVYV+RKRIKLS EKAIF+FV   LPPT ALMS+IYEE+KDEDGFLY+TYSGENTFG
Sbjct:    2 RSKFKDEHPFEKRKAEAERIRQKYADRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116
[Close]
BLAST of CB304986 vs. ExPASy Swiss-Prot
Match: ATG8_ASPNC (Autophagy-related protein 8 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=atg8 PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.224e-45
Identity = 88/115 (76.52%), Postives = 100/115 (86.96%), Query Frame = -3 
Query:  277 KSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIDKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFG 621
            +S FK EHP E+R AE+ RIR+KY DRIPVI EK EK+D+  IDKKKYLVPADL+VGQFVYV+RKRIKLS EKAIF+FV   LPPT ALMS+IYEE+KDEDGFLY+TYSGENTFG
Sbjct:    2 RSKFKDEHPFEKRKAEAERIRQKYADRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116
[Close]
BLAST of CB304986 vs. ExPASy Swiss-Prot
Match: ATG8_ASPFU (Autophagy-related protein 8 OS=Aspergillus fumigatus GN=atg8 PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.224e-45
Identity = 88/115 (76.52%), Postives = 100/115 (86.96%), Query Frame = -3 
Query:  277 KSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIDKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFG 621
            +S FK EHP E+R AE+ RIR+KY DRIPVI EK EK+D+  IDKKKYLVPADL+VGQFVYV+RKRIKLS EKAIF+FV   LPPT ALMS+IYEE+KDEDGFLY+TYSGENTFG
Sbjct:    2 RSKFKDEHPFEKRKAEAERIRQKYADRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116
[Close]
BLAST of CB304986 vs. ExPASy Swiss-Prot
Match: ATG8_ASPCL (Autophagy-related protein 8 OS=Aspergillus clavatus GN=atg8 PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.224e-45
Identity = 88/115 (76.52%), Postives = 100/115 (86.96%), Query Frame = -3 
Query:  277 KSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIDKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFG 621
            +S FK EHP E+R AE+ RIR+KY DRIPVI EK EK+D+  IDKKKYLVPADL+VGQFVYV+RKRIKLS EKAIF+FV   LPPT ALMS+IYEE+KDEDGFLY+TYSGENTFG
Sbjct:    2 RSKFKDEHPFEKRKAEAERIRQKYADRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116
[Close]
BLAST of CB304986 vs. ExPASy Swiss-Prot
Match: ATG8_PHANO (Autophagy-related protein 8 OS=Phaeosphaeria nodorum GN=ATG8 PE=3 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.598e-45
Identity = 88/115 (76.52%), Postives = 100/115 (86.96%), Query Frame = -3 
Query:  277 KSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIDKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFG 621
            +S FK EHP E+R AE+ RIR+KY DRIPVI EK EK+D+  IDKKKYLVPADL+VGQFVYV+RKRIKLS EKAIF+FV   LPPT ALMS+IYEE+KDEDGFLY+TYSGENTFG
Sbjct:    2 RSKFKDEHPFEKRKAEAERIRQKYNDRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116
[Close]
BLAST of CB304986 vs. ExPASy Swiss-Prot
Match: ATG8_USTMA (Autophagy-related protein 8 OS=Ustilago maydis GN=ATG8 PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 2.726e-45
Identity = 86/115 (74.78%), Postives = 102/115 (88.70%), Query Frame = -3 
Query:  277 KSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIDKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFG 621
            +S+FK EH  E+R AE+ RIR+KYPDRIPVI EKA++TD+P IDKKKYLVP+DL+VGQFVYV+RKRIKL+ EKAIF+FV   LP T ALMSAIYEE+KDEDGFLY++YSGENTFG
Sbjct:    2 RSAFKNEHSFEKRKAEAERIRQKYPDRIPVICEKADRTDIPTIDKKKYLVPSDLTVGQFVYVIRKRIKLAPEKAIFIFVDEVLPATAALMSAIYEEHKDEDGFLYVSYSGENTFG 116
[Close]
BLAST of CB304986 vs. ExPASy Swiss-Prot
Match: ATG8_EMENI (Autophagy-related protein 8 OS=Emericella nidulans GN=atg8 PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 2.726e-45
Identity = 88/115 (76.52%), Postives = 99/115 (86.09%), Query Frame = -3 
Query:  277 KSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIDKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFG 621
            +S FK EHP E+R AE+ RIR KY DRIPVI EK EK+D+  IDKKKYLVPADL+VGQFVYV+RKRIKLS EKAIF+FV   LPPT ALMS+IYEE+KDEDGFLY+TYSGENTFG
Sbjct:    2 RSKFKDEHPFEKRKAEAERIRAKYADRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116
The following BLAST results are available for this feature:
BLAST of CB304986 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
ATG8_NEOFI1.224e-4576.52Autophagy-related protein 8 OS=Neosartorya fischer... [more]
ATG8_COLLN1.224e-4576.52Autophagy-related protein 8 OS=Colletotrichum lind... [more]
ATG8_ASPTN1.224e-4576.52Autophagy-related protein 8 OS=Aspergillus terreus... [more]
ATG8_ASPOR1.224e-4576.52Autophagy-related protein 8 OS=Aspergillus oryzae ... [more]
ATG8_ASPNC1.224e-4576.52Autophagy-related protein 8 OS=Aspergillus niger (... [more]
ATG8_ASPFU1.224e-4576.52Autophagy-related protein 8 OS=Aspergillus fumigat... [more]
ATG8_ASPCL1.224e-4576.52Autophagy-related protein 8 OS=Aspergillus clavatu... [more]
ATG8_PHANO1.598e-4576.52Autophagy-related protein 8 OS=Phaeosphaeria nodor... [more]
ATG8_USTMA2.726e-4574.78Autophagy-related protein 8 OS=Ustilago maydis GN=... [more]
ATG8_EMENI2.726e-4576.52Autophagy-related protein 8 OS=Emericella nidulans... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0003_IIaR_B11 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0003_IIaR_B11 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304986 ID=CB304986; Name=CB304986; organism=Citrus sinensis; type=EST; length=656bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCAGTAAATTAGTTTCCTCC
ATTCAATATCTACCGCTAAGGGACAATTTTAACGAGAGTTACTTCTATCA
TCAACTGATGCAATCAACCCAAAATAAAAACAATCATCAACTGATGCAAT
CAACCCCAAATAAAAACAAGATATCAGTGAACATGTCTGGGAATGGCTTA
AAAGGGATCAACTGAGAATATACAACTTTCAAATTTTATGATACATGGCT
TGTTGCCTTCGCTCTTAAAATGACCAACCGAAGGTATTCTCTCCACTGTA
AGTCATGTAAAGAAAACCATCTTCATCCTTGTTTTCCTCATATATAGCAG
ACATCAAGGCACCGGTTGGAGGTAAAGTATTCTTAACAAAAACAAATATG
GCCTTTTCTGCACTGAGCTTAATCCTTTTACGGACAACATAAACAAATTG
TCCCACAGATAAATCCGCTGGGACAAGGTATTTTTTCTTGTCAATGTCAG
GAACATCAGTCTTCTCAGCCTTCTCCACAATCACCGGAATCCTGTCAGGA
TACTTCTCTCTAATGCGAGCAGATTCTGCCAGCCTCCTCTCCAATGGATG
CTCGAGCTTGAATGAACTTTTGGCCATGGCGAAACTGACGCTACGATGAC
TCTTCA
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