CB304987
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304987 vs. ExPASy Swiss-Prot
Match: TT16_ARATH (Protein TRANSPARENT TESTA 16 OS=Arabidopsis thaliana GN=TT16 PE=1 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.035e-23 Identity = 65/164 (39.63%), Postives = 98/164 (59.76%), Query Frame = -2 Query: 29 RGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSS-MVKTLERYRKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEE 517 RG++E+K+IEN+ RQVTF+KRR GL+KK ELS+LCDA + LI+FS GKL EFCS + M + ++RY N G P+ + +L + E L+ + L+ R G +L + EL+ LERQL+ S+ ++R + + M L L K ++L E+ Sbjct: 3 RGKIEIKKIENQTARQVTFSKRRTGLIKKTRELSILCDAHIGLIVFSATGKLSEFCSEQNRMPQLIDRYLHTN-GLRLPD-HHDDQEQLHHEMELLRRETC--NLELRLRPFHGHDLASIPPNELDGLERQLEHSVLKVRERKNELMQQQLENLSRKRRMLEED 162
BLAST of CB304987 vs. ExPASy Swiss-Prot
Match: MAD31_ORYSJ (MADS-box transcription factor 31 OS=Oryza sativa subsp. japonica GN=MADS31 PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 1.351e-23 Identity = 61/157 (38.85%), Postives = 96/157 (61.15%), Query Frame = -2 Query: 50 RGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMVKTL-ERYRKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHK 517 RGRVELK+IEN NRQVTF+KRR GLLKKA EL++LCDA++ +I+FS GK+YE+ S + + +RY K AP + ++ QE ++K L+ R +G++L L +++ +LE+Q++ SL ++R + Q + L E+ + Sbjct: 3 RGRVELKKIENPTNRQVTFSKRRMGLLKKANELAILCDAQIGVIVFSGTGKMYEYSSPPWRIANIFDRYLK----APSTRFEEMD-VQQRIIQEMTRMKDENNRLRIIMRQYMGDDLASLTLQDVSNLEQQIEFSLYKVRLRKQQLLDQQLLEMHSR 154
BLAST of CB304987 vs. ExPASy Swiss-Prot
Match: MAD16_ORYSJ (MADS-box transcription factor 16 OS=Oryza sativa subsp. japonica GN=MADS16 PE=1 SV=2) HSP 1 Score: 108.997 bits (271), Expect = 1.351e-23 Identity = 65/158 (41.14%), Postives = 98/158 (62.03%), Query Frame = -2 Query: 47 RGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMVKTL-ERYRKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKE 517 RG++E+KRIEN NRQVT++KRR G++KKA EL+VLCDA+VA+I+FS+ GK +EFCS S+ +K + +RY++ S + Q+ LK L+ R +GE+L L EL LE+ +D +LK++R R +++ T TE K+ Sbjct: 3 RGKIEIKRIENATNRQVTYSKRRTGIMKKARELTVLCDAQVAIIMFSSTGKYHEFCSPSTDIKGIFDRYQQA------IGTSLWIEQYENMQRTLSHLKDINRNLRTEIRQRMGEDLDGLEFDELRGLEQNVDAALKEVRH-RKYHVITTQTETYKKK 153
BLAST of CB304987 vs. ExPASy Swiss-Prot
Match: PIST_ARATH (Floral homeotic protein PISTILLATA OS=Arabidopsis thaliana GN=PI PE=1 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 1.765e-23 Identity = 63/168 (37.50%), Postives = 104/168 (61.90%), Query Frame = -2 Query: 29 RGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEF-CSSSSMVKTLERYRKCN----YGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEE 517 RG++E+KRIEN NR VTF+KRRNGL+KKA E++VLCDA+VALIIF++ GK+ ++ C S + L++Y+K + + A N+S E ++K ++LQ R+L GE++ LN K L ++E ++ L ++R + ++ L + E++++EE Sbjct: 3 RGKIEIKRIENANNRVVTFSKRRNGLVKKAKEITVLCDAKVALIIFASNGKMIDYCCPSMDLGAMLDQYQKLSGKKLWDAKHENLS----------NEIDRIKKENDSLQLELRHLKGEDIQSLNLKNLMAVEHAIEHGLDKVR----DHQMEILISKRRNEKMMAEE 156
BLAST of CB304987 vs. ExPASy Swiss-Prot
Match: MAD47_ORYSJ (MADS-box transcription factor 47 OS=Oryza sativa subsp. japonica GN=MADS47 PE=1 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 1.765e-23 Identity = 63/163 (38.65%), Postives = 95/163 (58.28%), Query Frame = -2 Query: 29 RGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMVKTLERYRKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEE 517 R R+ ++RI+N RQVTF+KRR GL KKA ELS+LCDAEV L++FS GKL++F +S+SM + ++RY + S + L+ +LK R + GEEL LN ++L+ LE+ L+ L + T+++ +LD + L+ K L EE Sbjct: 22 RERIAIRRIDNLAARQVTFSKRRRGLFKKAEELSILCDAEVGLVVFSATGKLFQF-ASTSMEQIIDRYNSHSKTLQRAEPSQLD-LQGEDSSTCARLKEELAETSLRLRQMRGEELHRLNVEQLQELEKSLESGLGSVLKTKSKKILDEIDGLERKRMQLIEE 182
BLAST of CB304987 vs. ExPASy Swiss-Prot
Match: AGL31_ARATH (Agamous-like MADS-box protein AGL31 OS=Arabidopsis thaliana GN=AGL31 PE=2 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 1.765e-23 Identity = 66/164 (40.24%), Postives = 99/164 (60.37%), Query Frame = -2 Query: 29 RGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMVKTLERYRKCNYGAPEPNVSAREALELSSQ-QEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEE 517 R +VE+KRIENK +RQVTF+KRRNGL++KA +LS+LC++ +A+++ S GKLY+ S +M K ++RY + EAL+L+ + + YL LK E L+ Q L + + L SLE QL+ +L R+ +T+ M+ + LQ E LL EE Sbjct: 3 RKKVEIKRIENKSSRQVTFSKRRNGLIEKARQLSILCESSIAVLVVSGSGKLYKSASGDNMSKIIDRYE-------IHHADELEALDLAEKTRNYLPLK---ELLEIVQSKLEESNVDNASVDTLISLEEQLETALSVTRARKTELMMGEVKSLQKTENLLREE 156
BLAST of CB304987 vs. ExPASy Swiss-Prot
Match: GLOB_ANTMA (Floral homeotic protein GLOBOSA OS=Antirrhinum majus GN=GLO PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 2.305e-23 Identity = 59/150 (39.33%), Postives = 97/150 (64.67%), Query Frame = -2 Query: 80 RGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS-SSSMVKTLERYRKCNYGAPEPNVSAREALELSSQ---QEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYM 517 RG++E+KRIEN NRQVT++KRRNG++KKA E+SVLCDA V++IIF++ GK++EFCS S+++V L+ Y K +S + + + E ++K +++Q R+L GE++ LN KEL LE L+ +++ + +++ Sbjct: 3 RGKIEIKRIENSSNRQVTYSKRRNGIMKKAKEISVLCDAHVSVIIFASSGKMHEFCSPSTTLVDMLDHYHK---------LSGKRLWDPKHEHLDNEINRVKKENDSMQIELRHLKGEDITTLNYKELMVLEDALENGTSALKNKQMEFV 143
BLAST of CB304987 vs. ExPASy Swiss-Prot
Match: MADS1_PETHY (Floral homeotic protein PMADS 1 OS=Petunia hybrida GN=PMADS1 PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 3.010e-23 Identity = 65/163 (39.88%), Postives = 98/163 (60.12%), Query Frame = -2 Query: 32 RGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMVKTL-ERYRKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSE 517 RG++++KRIEN+ NRQVT++KRRNGL KKA EL+VLCDA+V++I+ S+ GKL+EF S S K L + Y+K V + Q++ KLK L++ R +GE L LN ++LE L +D SLK IR + + + + + + K + + E Sbjct: 3 RGKIQIKRIENQTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMISSTGKLHEFISPSITTKQLFDLYQK------TVGVDLWNSHYEKMQEQLRKLKEVNRNLRKEIRQRMGESLNDLNYEQLEELMENVDNSLKLIRERKYKVIGNQIETFKKKVRNVEE 159
BLAST of CB304987 vs. ExPASy Swiss-Prot
Match: MAD30_ORYSJ (MADS-box transcription factor 30 OS=Oryza sativa subsp. japonica GN=MADS30 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 4.347e-22 Identity = 56/164 (34.15%), Postives = 96/164 (58.54%), Query Frame = -2 Query: 29 RGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMVKTLERYRKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNS-KELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEE 517 +G++E+KRIE+ RQVTF+KRR G LKKA EL+VLCDA+V +++FS++GKL++FCS V +E + + + + E +L+ + L+ S R GE+L +++ EL L+ QL+ SL ++ + + + M L +++ Q + E+ Sbjct: 3 QGKIEMKRIEDATRRQVTFSKRRAGFLKKANELAVLCDAQVGVVVFSDKGKLFDFCSPP--VILMELFHRYEITTRNTRLQETNRDDEQMVMEITRLRNEIDQLEASLRRQTGEDLSSVSTVDELSQLQLQLESSLSKVHARKDELMSQQLEDMRRMHQTVHEQ 164
BLAST of CB304987 vs. ExPASy Swiss-Prot
Match: MAD55_ORYSJ (MADS-box transcription factor 55 OS=Oryza sativa subsp. japonica GN=MADS55 PE=2 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 7.414e-22 Identity = 68/184 (36.96%), Postives = 108/184 (58.70%), Query Frame = -2 Query: 29 RGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMVKTLERY--RKCNYGA--PEPNV--------------SAREALELSSQQEYLKLKARYEALQRSQ---RNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEE 517 R R E++RIE+ RQVTF+KRR GL KKA EL+VLCDA+VAL++FS+ GKL +F +SS+M + +++Y N G +P++ ++ + L Q E+ K + E L + R + GEEL L+ +EL+ +E+ L+ L+++ T+ Q + ++ELQ K L+EE Sbjct: 3 RERREIRRIESAAARQVTFSKRRRGLFKKAEELAVLCDADVALVVFSSTGKLSQF-ASSNMNEIIDKYTTHSKNLGKTDKQPSIDLNFFLIILLRTYTNSYAYIHLLLQLEHSKCSSLNEQLAEASLQLRQMRGEELEGLSVEELQQMEKNLEAGLQRVLCTKDQQFMQEISELQRKGIQLAEE 185 The following BLAST results are available for this feature:
BLAST of CB304987 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 117
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304987 ID=CB304987; Name=CB304987; organism=Citrus sinensis; type=EST; length=518bpback to top |