CB304987
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304987 vs. ExPASy Swiss-Prot
Match: DEFA_ANTMA (Floral homeotic protein DEFICIENS OS=Antirrhinum majus GN=DEFA PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 3.680e-21 Identity = 60/163 (36.81%), Postives = 97/163 (59.51%), Query Frame = -2 Query: 32 RGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMVKTL-ERYRKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSE 517 RG++++KRIEN+ NRQVT++KRRNGL KKA+ELSVLCDA+V++I+ S+ KL+E+ S ++ K L ++Y+K V + Q+ KL L+R R +GE L L +++ +L +D SLK IR + + + + + + K + + E Sbjct: 3 RGKIQIKRIENQTNRQVTYSKRRNGLFKKAHELSVLCDAKVSIIMISSTQKLHEYISPTTATKQLFDQYQKA------VGVDLWSSHYEKMQEHLKKLNEVNRNLRREIRQRMGESLNDLGYEQIVNLIEDMDNSLKLIRERKYKVISNQIDTSKKKVRNVEE 159
BLAST of CB304987 vs. ExPASy Swiss-Prot
Match: MADS4_ORYSJ (MADS-box transcription factor 4 OS=Oryza sativa subsp. japonica GN=MADS4 PE=1 SV=3) HSP 1 Score: 98.9821 bits (245), Expect = 1.398e-20 Identity = 62/173 (35.84%), Postives = 98/173 (56.65%), Query Frame = -2 Query: 29 RGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSS------MVKTLERYR----KCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEE 517 RG++E+KRIEN NRQVTF+KRR G+LKKA E+ VLCDAEV ++IFS+ GKL ++C+ + + + LE+Y+ K + ++SA E ++K + +Q R++ GE+L L KEL ++E L+ +R M+D + E++L +E Sbjct: 3 RGKIEIKRIENSTNRQVTFSKRRAGILKKAREIGVLCDAEVGVVIFSSAGKLSDYCTPKTTSVFPPLSRILEKYQTNSGKILWDEKHKSLSA----------EIDRVKKENDNMQIELRHMKGEDLNSLQPKELIAIEEALNNGQANLRDK----MMDHWRMHKRNEKMLEDE 161
BLAST of CB304987 vs. ExPASy Swiss-Prot
Match: AP3_ARATH (Floral homeotic protein APETALA 3 OS=Arabidopsis thaliana GN=AP3 PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 3.444e-19 Identity = 57/157 (36.31%), Postives = 90/157 (57.32%), Query Frame = -2 Query: 92 RGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMVKTLERYRKCNYGAPEPNVSAREALELSSQQEYLKLKA-RYEALQRSQRNL--------------LGEELGPLNSKELESLERQLDMSLKQIRSTR 517 RG++++KRIEN+ NRQVT++KRRNGL KKA+EL+VLCDA V++I+FS+ KL+E+ S PN + +E ++L + + A +YE +Q ++R L LGE L L+ +EL LE +++ + K +R + Sbjct: 3 RGKIQIKRIENQTNRQVTYSKRRNGLFKKAHELTVLCDARVSIIMFSSSNKLHEYIS--------------------PNTTTKEIVDLYQTISDVDVWATQYERMQETKRKLLETNRNLRTQIKQRLGECLDELDIQELRRLEDEMENTFKLVRERK 139
BLAST of CB304987 vs. ExPASy Swiss-Prot
Match: CMB2_DIACA (MADS-box protein CMB2 OS=Dianthus caryophyllus GN=CMB2 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 2.916e-18 Identity = 52/143 (36.36%), Postives = 88/143 (61.54%), Query Frame = -2 Query: 92 RGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSS-SMVKTLERYRKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTR 517 RG++E+++IENK NRQVTF+KRRNG++KKA EL+VLCDA+V+L++ S+ KL+ + S S+ K + Y+K V Q+++ K+ L+R +G +L L EL +L+++++ ++ QIR+ + Sbjct: 3 RGKLEIRKIENKTNRQVTFSKRRNGIMKKAQELTVLCDAKVSLLMISSTHKLHHYLSPGVSLKKMYDEYQKIE------GVDLWRKQWERMQEQHRKVLELNSLLRREISRRMGGDLEGLTLVELSALQQEMEEAIIQIRNKK 139
BLAST of CB304987 vs. ExPASy Swiss-Prot
Match: AP32_ASAEU (MADS-box protein AeAP3-2 (Fragment) OS=Asarum europaeum GN=AP3-2 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 3.808e-18 Identity = 54/143 (37.76%), Postives = 86/143 (60.14%), Query Frame = -2 Query: 29 GLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSS-SMVKTLERYRKCNYGAPEPNVSAREALELSSQQEYL---KLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEE 445 GLLKKA EL++LCDA++ +IIFS+ GK++EF S SM + ++RY+K +S A +QQ Y ++K + LQ + R+ GE+L L E+ LE+QL++S+ ++RS + Q + L L+ KE +L E+ Sbjct: 2 GLLKKARELAILCDAQLGVIIFSSSGKMFEFSSPPISMREIIDRYQK---------LSGNCAPVYDNQQVYCEITRMKNEIDKLQATMRHFAGEDLTSLTMNEMLQLEQQLEISVNKVRSRKEQLLQQQLDNLRRKENMLEEQ 135
BLAST of CB304987 vs. ExPASy Swiss-Prot
Match: MAD32_ORYSJ (MADS-box transcription factor 32 OS=Oryza sativa subsp. japonica GN=MADS32 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.108e-17 Identity = 55/157 (35.03%), Postives = 89/157 (56.69%), Query Frame = -2 Query: 53 RGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSS--SMVKTLERYRKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQH 517 RGR E+KRIEN RQ TF KRR+GL KKA EL+VLCDA++ L++FS GKLY F S + S+ + +ERY + ++ EL K+ + + L++ R + ++ LE+LE L+ +++++RS + + + + LQ+ Sbjct: 3 RGRSEIKRIENPTQRQSTFYKRRDGLFKKARELAVLCDADLLLLLFSASGKLYHFLSPTVPSVREFVERYEATTHTKVWADIRQERRAELE------KVGSMCDLLEKQLRFMTVDDGEEYTVPSLEALEHNLEAAMRKVRSEKDRKIGGEICYLQN 153
BLAST of CB304987 vs. ExPASy Swiss-Prot
Match: MEF2C_PIG (Myocyte-specific enhancer factor 2C OS=Sus scrofa GN=MEF2C PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 2.310e-15 Identity = 46/129 (35.66%), Postives = 76/129 (58.91%), Query Frame = -2 Query: 191 RGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMVKTLERY--------------------RKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQR 517 R ++++ RI ++ NRQVTF KR+ GL+KKAYELSVLCD E+ALIIF++ KL+++ +S+ M K L +Y +K N G P+ + AL ++++Y K+ ++ + +S + Sbjct: 3 RKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQY-ASTDMDKVLLKYTEYNEPHESRTNSDIVEALNKKENKGCESPDPDSSYALTPRTEEKYKKINEEFDNMIKSHK 130
BLAST of CB304987 vs. ExPASy Swiss-Prot
Match: MEF2_DROME (Myocyte-specific enhancer factor 2 OS=Drosophila melanogaster GN=Mef2 PE=1 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 1.147e-14 Identity = 40/87 (45.98%), Postives = 63/87 (72.41%), Query Frame = -2 Query: 257 RGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMVKTLERYRKCNYGAPEPNVSAREALE 517 R ++++ RI ++ NRQVTF KR+ G++KKAYELSVLCD E+ALIIFS+ KLY++ +S+ M + L +Y + Y P +++ + +E Sbjct: 3 RKKIQISRITDERNRQVTFNKRKFGVMKKAYELSVLCDCEIALIIFSSSNKLYQY-ASTDMDRVLLKYTE--YNEPHESLTNKNIIE 86
BLAST of CB304987 vs. ExPASy Swiss-Prot
Match: MEF2D_XENLA (Myocyte-specific enhancer factor 2D homolog OS=Xenopus laevis GN=mef2d PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.147e-14 Identity = 42/85 (49.41%), Postives = 62/85 (72.94%), Query Frame = -2 Query: 263 RGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMVKTLERYRKCNYGAPEPNVSAREA 517 R +++++RI ++ NRQVTF KR+ GL+KKAYELSVLCD E+ALIIF++ KL+++ +S+ M K L +Y + N EP+ S A Sbjct: 3 RKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQY-ASTDMDKVLLKYTEYN----EPHESRTNA 82
BLAST of CB304987 vs. ExPASy Swiss-Prot
Match: MEF2D_RAT (Myocyte-specific enhancer factor 2D OS=Rattus norvegicus GN=Mef2d PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.147e-14 Identity = 42/85 (49.41%), Postives = 62/85 (72.94%), Query Frame = -2 Query: 263 RGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMVKTLERYRKCNYGAPEPNVSAREA 517 R +++++RI ++ NRQVTF KR+ GL+KKAYELSVLCD E+ALIIF++ KL+++ +S+ M K L +Y + N EP+ S A Sbjct: 3 RKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQY-ASTDMDKVLLKYTEYN----EPHESRTNA 82 The following BLAST results are available for this feature:
BLAST of CB304987 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 117
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304987 ID=CB304987; Name=CB304987; organism=Citrus sinensis; type=EST; length=518bpback to top |