CB304990

Overview
NameCB304990
Unique NameCB304990
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length644
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11430 contig Csv1_Contig11430:1404..2047. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB304990 vs. ExPASy Swiss-Prot
Match: C71BD_ARATH (Cytochrome P450 71B13 OS=Arabidopsis thaliana GN=CYP71B13 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.708e-28
Identity = 54/118 (45.76%), Postives = 81/118 (68.64%), Query Frame = -2
Query:  233 DVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL----DNHNMDMEDKFGLTVQKAQPLHAVP 574
            DV+I G+ +PK   + VN+WAI R+ + W +P  FIPERF+ +  D+KG NFEL+PFG+GRRICPG+ + + ++HL L +L+  FDWKL    +  ++D+E+ +GL   K  PL  +P
Sbjct:  373 DVKIGGYNIPKKTWIHVNIWAIHRNPNVWKDPEAFIPERFMDNQIDYKGLNFELLPFGSGRRICPGIGMGMALIHLTLINLLYRFDWKLPEGMEVEDVDLEESYGLVCPKKVPLELIP 490          
BLAST of CB304990 vs. ExPASy Swiss-Prot
Match: C71BC_ARATH (Cytochrome P450 71B12 OS=Arabidopsis thaliana GN=CYP71B12 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.231e-28
Identity = 55/118 (46.61%), Postives = 80/118 (67.80%), Query Frame = -2
Query:  233 DVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAQPLHAVP 574
            DV+I G+ +PK   + VN+WAI R+ + W +P  FIPERF+ S  D+KG NFEL+PFG+GRRICPG+ + + ++HL L +L+  FDWKL       ++D+E+ +GL   K  PL  +P
Sbjct:  373 DVKIGGYNIPKKTWIHVNIWAIHRNPNVWKDPEAFIPERFMDSQIDYKGLNFELLPFGSGRRICPGIGMGMALVHLTLINLLYRFDWKLPEGMKVADVDLEESYGLVCPKKIPLQLIP 490          
BLAST of CB304990 vs. ExPASy Swiss-Prot
Match: C80A1_BERST (Berbamunine synthase OS=Berberis stolonifera GN=CYP80A1 PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 6.491e-28
Identity = 56/116 (48.28%), Postives = 81/116 (69.83%), Query Frame = -2
Query:  233 EIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL----DNHNMDMEDKFGLTVQKAQPLHAVP 568
            ++ G+T+PKG  V VN  AIGRD   W +P  F PERFL S+ ++ G+ F+ IPFG+GRRICPG PLA+R++ L+L SL+++F W+L     N  +DME+ F L++  A+PL  +P
Sbjct:  368 QVMGYTIPKGMDVHVNAHAIGRDPKDWKDPLKFQPERFLDSDIEYNGKQFQFIPFGSGRRICPGRPLAVRIIPLVLASLVHAFGWELPDGVPNEKLDMEELFTLSLCMAKPLRVIP 483          
BLAST of CB304990 vs. ExPASy Swiss-Prot
Match: C75A4_GENTR (Flavonoid 3',5'-hydroxylase OS=Gentiana triflora GN=CYP75A4 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 6.491e-28
Identity = 63/118 (53.39%), Postives = 86/118 (72.88%), Query Frame = -2
Query:  236 VEIAGFTVPKGAQVFVNVWAIGRDESTW-DNPHTFIPERFL-GSNA--DFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL--DNHNMDMEDKFGLTVQKAQPLHAV 571
            V++ G+ +PKG ++ VN+WAIGRD S W DNP+ F PERFL G NA  D +G +FELIPFGAGRRIC G  + I ++  +LG+L++SFDWKL      ++M++ FGL +QKA PL A+
Sbjct:  387 VDVNGYYIPKGTRLNVNIWAIGRDPSVWGDNPNEFDPERFLYGRNAKIDPRGNHFELIPFGAGRRICAGTRMGILLVEYILGTLVHSFDWKLGFSEDELNMDETFGLALQKAVPLAAM 504          
BLAST of CB304990 vs. ExPASy Swiss-Prot
Match: C71A8_MENPI (Cytochrome P450 71A8 OS=Mentha piperita GN=CYP71A8 PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 8.477e-28
Identity = 60/138 (43.48%), Postives = 81/138 (58.70%), Query Frame = -2
Query:  236 AVVKEXXXXXXXXXXXXXXXXXKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN--HNMDMEDKFGLTVQKAQPLHAV 643
            AV+KE                  DVE+ G+ VP G  V +N WAIGRD ++WD P  F PERFL S+ DFKG +FELIPFGAGRR CPG    +  L   L +L+  FDW+L +    +DM ++ G+ +++  PL A+
Sbjct:  361 AVMKETMRFHTPIPLLVPRVARNDVEVMGYDVPVGTMVMINAWAIGRDPTSWDEPEKFRPERFLNSSVDFKGLDFELIPFGAGRRGCPGTTFPMATLEFTLANLMQKFDWELPHECRELDMSERPGVAIRRVIPLLAI 498          
BLAST of CB304990 vs. ExPASy Swiss-Prot
Match: C75A3_PETHY (Flavonoid 3',5'-hydroxylase 2 OS=Petunia hybrida GN=CYP75A3 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.107e-27
Identity = 59/115 (51.30%), Postives = 80/115 (69.57%), Query Frame = -2
Query:  236 IAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLG---SNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDNH--NMDMEDKFGLTVQKAQPLHAV 565
            + G+ +PK  ++ VN+WAIGRD   W+NP  F PERFL    S  D +G +FELIPFGAGRRIC G  + I M+  +LG+L++SFDWKL +    ++ME+ FGL +QKA PL A+
Sbjct:  380 VDGYYIPKNTRLSVNIWAIGRDPEVWENPLEFYPERFLSGRNSKIDPRGNDFELIPFGAGRRICAGTRMGIVMVEYILGTLVHSFDWKLPSEVIELNMEEAFGLALQKAVPLEAM 494          
BLAST of CB304990 vs. ExPASy Swiss-Prot
Match: C71BQ_ARATH (Cytochrome P450 71B26 OS=Arabidopsis thaliana GN=CYP71B26 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.107e-27
Identity = 60/118 (50.85%), Postives = 77/118 (65.25%), Query Frame = -2
Query:  233 DVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAQPLHAVP 574
            + EI G+T+P   ++ VNVWAIGRD  TW +P  F+PERF  SN D KGQNFEL+ FG+GRRICPGL +   M+   L +++  FDWKL       ++DME+  GLTV K   L  VP
Sbjct:  377 EFEINGYTIPAKTRLHVNVWAIGRDPDTWKDPEMFLPERFNDSNIDAKGQNFELLSFGSGRRICPGLYMGTTMVEFGLANMLYHFDWKLPEGMVVEDIDMEEAPGLTVSKKSELVLVP 494          
BLAST of CB304990 vs. ExPASy Swiss-Prot
Match: C75A1_PETHY (Flavonoid 3',5'-hydroxylase 1 OS=Petunia hybrida GN=CYP75A1 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.888e-27
Identity = 59/115 (51.30%), Postives = 80/115 (69.57%), Query Frame = -2
Query:  236 IAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLG---SNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDNH--NMDMEDKFGLTVQKAQPLHAV 565
            + G+ +PK  ++ VN+WAIGRD   W+NP  F PERFL    S  D +G +FELIPFGAGRRIC G  + I M+  +LG+L++SFDWKL +    ++ME+ FGL +QKA PL A+
Sbjct:  380 VDGYYIPKNTRLSVNIWAIGRDPQVWENPLEFNPERFLSGRNSKIDPRGNDFELIPFGAGRRICAGTRMGIVMVEYILGTLVHSFDWKLPSEVIELNMEEAFGLALQKAVPLEAM 494          
BLAST of CB304990 vs. ExPASy Swiss-Prot
Match: C71BB_ARATH (Cytochrome P450 71B11 OS=Arabidopsis thaliana GN=CYP71B11 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.888e-27
Identity = 52/118 (44.07%), Postives = 80/118 (67.80%), Query Frame = -2
Query:  233 DVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL----DNHNMDMEDKFGLTVQKAQPLHAVP 574
            DV+I G+ +PK   + VN+WAI R+ + W +P  FIPERF+ +  D+KG NFE +PFG+GRR+CPG+ + + ++HL L +L+  FDWKL    +  ++D+E+ +GL   K  PL  +P
Sbjct:  373 DVKIGGYDIPKKTWIHVNIWAIHRNPNVWKDPEAFIPERFMDNQIDYKGLNFEFLPFGSGRRMCPGIGMGMALVHLTLINLLYRFDWKLPEGMEVEDVDLEESYGLVCPKKVPLQLIP 490          
BLAST of CB304990 vs. ExPASy Swiss-Prot
Match: C71BE_ARATH (Cytochrome P450 71B14 OS=Arabidopsis thaliana GN=CYP71B14 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.466e-27
Identity = 51/117 (43.59%), Postives = 80/117 (68.38%), Query Frame = -2
Query:  233 VEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAQPLHAVP 571
            ++I G+ +PK   ++VN+WA+ R+ + W +P  FIPERF+ S  D+KG +FEL+PFG+GRR+CPG+ L + ++HL L +L+  FDWKL       ++D+E+ +GL   K  PL  +P
Sbjct:  374 IKIGGYDIPKKTWIYVNIWAVQRNPNVWKDPEVFIPERFMHSEIDYKGVDFELLPFGSGRRMCPGMGLGMALVHLTLINLLYRFDWKLPEGMNIEDVDLEESYGLVCPKKVPLQLIP 490          
The following BLAST results are available for this feature:
BLAST of CB304990 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 187
Match NameE-valueIdentityDescription
C71BD_ARATH1.708e-2845.76Cytochrome P450 71B13 OS=Arabidopsis thaliana GN=C... [more]
C71BC_ARATH2.231e-2846.61Cytochrome P450 71B12 OS=Arabidopsis thaliana GN=C... [more]
C80A1_BERST6.491e-2848.28Berbamunine synthase OS=Berberis stolonifera GN=CY... [more]
C75A4_GENTR6.491e-2853.39Flavonoid 3',5'-hydroxylase OS=Gentiana triflora G... [more]
C71A8_MENPI8.477e-2843.48Cytochrome P450 71A8 OS=Mentha piperita GN=CYP71A8... [more]
C75A3_PETHY1.107e-2751.30Flavonoid 3',5'-hydroxylase 2 OS=Petunia hybrida G... [more]
C71BQ_ARATH1.107e-2750.85Cytochrome P450 71B26 OS=Arabidopsis thaliana GN=C... [more]
C75A1_PETHY1.888e-2751.30Flavonoid 3',5'-hydroxylase 1 OS=Petunia hybrida G... [more]
C71BB_ARATH1.888e-2744.07Cytochrome P450 71B11 OS=Arabidopsis thaliana GN=C... [more]
C71BE_ARATH2.466e-2743.59Cytochrome P450 71B14 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0003_IIaR_C08 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0003_IIaR_C08 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304990 ID=CB304990; Name=CB304990; organism=Citrus sinensis; type=EST; length=644bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGATGCTATTAAATCGCATGA
CTTTATAGTTTATTGAAGATTAACTCCGTTAAGTTGCGTGTCTACATAAA
AAAAAATAAGAGCGCCCACACCTGAGAATGATTACACACACATATAACTA
ACCACCAAGCGCTTTATATAGTGGCTACCACCAAGCGCTTTATATATTGG
CTACGAACTATAGTATAGAACTAGATGGCACCAGGGACAGCATGAAGGGG
TTGAGCCTTCTGTACGGTGAGGCCAAATTTATCTTCCATGTCCATGTTGT
GGTTATCAAGCTTCCAATCAAAAGAGTTAATAAGTGAACCCAACATTAGA
TGTAACATTCTGATTGCCAATGGTAAACCAGGACAAATTCGTCGTCCAGC
TCCGAAGGGAATTAGCTCAAAATTCTGGCCTTTGAAATCAGCATTTGACC
CTAAGAACCTTTCGGGAATAAAAGTGTGAGGGTTGTCCCATGTGCTTTCA
TCTCTGCCAATAGCCCATACATTGACAAAAACTTGTGCACCTTTTGGCAC
TGTGAAGCCTGCAATTTCAACATCTTTTGTGGCTTTGCGGGGAAGTAATA
AGGGAGCTGCAGGGTGCAATCTCAAAGTTTCTTTAACAACAGCT
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