CB304990

Overview
NameCB304990
Unique NameCB304990
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length644
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11430 contig Csv1_Contig11430:1404..2047. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB304990 vs. ExPASy Swiss-Prot
Match: C93A3_SOYBN (Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 3.561e-26
Identity = 54/116 (46.55%), Postives = 80/116 (68.97%), Query Frame = -2
Query:  233 IAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLG---SNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL--DNHNMDMEDKFGLTVQKAQPLHAVP 565
            + G+ +P   ++FVNVWAIGRD + W+NP  F PERF+    S  D +GQ++ L+PFG+GRR CPG  LA++++H+ L  LI  F WK+  DN  ++ME+K G+T+ +A P+  VP
Sbjct:  385 VCGYDIPAKTRLFVNVWAIGRDPNHWENPLEFRPERFVENGKSQLDVRGQHYHLLPFGSGRRACPGTSLALQVVHVNLAVLIQCFQWKVDCDNGKVNMEEKAGITLPRAHPIICVP 500          
BLAST of CB304990 vs. ExPASy Swiss-Prot
Match: C71BU_ARATH (Cytochrome P450 71B31 OS=Arabidopsis thaliana GN=CYP71B31 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 3.561e-26
Identity = 56/118 (47.46%), Postives = 78/118 (66.10%), Query Frame = -2
Query:  233 DVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAQPLHAVP 574
            D+EI G+ +PK A V +N +AIGRD   W NP  F PERFL ++ ++KGQ++EL+PFGAGRR CPG+ L I +L L L +++  FDW L +     ++DME+   L + K  PL  VP
Sbjct:  378 DIEIQGYHIPKNAHVKINTYAIGRDPKRWTNPEEFNPERFLNTSINYKGQHYELLPFGAGRRNCPGMTLGITILELGLLNILYYFDWSLPSGMTIKDIDMEEDGALNIAKKVPLQLVP 495          
BLAST of CB304990 vs. ExPASy Swiss-Prot
Match: C71B4_ARATH (Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CYP71B4 PE=2 SV=2)

HSP 1 Score: 118.242 bits (295), Expect = 3.561e-26
Identity = 54/116 (46.55%), Postives = 76/116 (65.52%), Query Frame = -2
Query:  233 DVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL--DNHNMDMEDKFGLTVQKAQPLHAVP 574
            D++I G+ +P+   + VN W+IGRD  +W NP  F PERF+    D+KG +FEL+PFG+GRRICPG+ +AI  + L L +L+  FDW +     +MDME+   LTV K  PL  +P
Sbjct:  383 DIKIQGYDIPQKRALLVNAWSIGRDPESWKNPEEFNPERFIDCPVDYKGHSFELLPFGSGRRICPGIAMAIATIELGLLNLLYFFDWNMPEKKKDMDMEEAGDLTVDKKVPLELLP 498          
BLAST of CB304990 vs. ExPASy Swiss-Prot
Match: C71B8_ARATH (Cytochrome P450 71B8 OS=Arabidopsis thaliana GN=CYP71B8 PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 4.651e-26
Identity = 54/118 (45.76%), Postives = 78/118 (66.10%), Query Frame = -2
Query:  233 DVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAQPLHAVP 574
            D+EI G+ +PK A + ++ +AIGRD   W NP  F PERF  ++ ++KGQ++EL+PFGAGRR CPG+ L I +L L L +++  FDW L N     ++DME+   LT+ K  PL  +P
Sbjct:  380 DIEIQGYHIPKNAHIKISTYAIGRDPKCWTNPEEFNPERFANTSINYKGQHYELLPFGAGRRSCPGMTLGITILELGLLNILYYFDWSLPNGMTIKDIDMEEDGALTIAKKVPLELIP 497          
BLAST of CB304990 vs. ExPASy Swiss-Prot
Match: C71A6_NEPRA (Cytochrome P450 71A6 (Fragment) OS=Nepeta racemosa GN=CYP71A6 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 6.075e-26
Identity = 58/141 (41.13%), Postives = 82/141 (58.16%), Query Frame = -2
Query:  233 AVVKEXXXXXXXXXXXXXXXXXKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAQPLHAVP 643
            AV+KE                 +D ++ G+ V  G +V +N WAIGRD S W+   TF+PERFL ++ D++G +FELIPFG+GRR CPG   A  +  L L +L++ FD+KL N     ++DM +  G T+ K  PL  VP
Sbjct:  364 AVMKESLRLHAPVPLLVPRESTRDTKVLGYDVASGTRVLINCWAIGRDSSVWEESETFLPERFLETSIDYRGMHFELIPFGSGRRGCPGATFAAAIDELALATLVHKFDFKLPNGVRVEDLDMSEGSGFTIHKKFPLLVVP 504          
BLAST of CB304990 vs. ExPASy Swiss-Prot
Match: C98A1_SORBI (Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 7.934e-26
Identity = 58/140 (41.43%), Postives = 78/140 (55.71%), Query Frame = -2
Query:  236 AVVKEXXXXXXXXXXXXXXXXXKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAQPLHAV 643
            AVVKE                  +V+I G+ +PKGA V VNVWA+ RD   W NP  + PERFL  N D KG +F ++PFGAGRR+CPG  L I ++  M+G L++ F+W L       +++M +  GL      PL AV
Sbjct:  355 AVVKESLRLHPPTPLMLPHKASTNVKIGGYDIPKGANVMVNVWAVARDPKVWSNPLEYRPERFLEENIDIKGSDFRVLPFGAGRRVCPGAQLGINLVASMIGHLLHHFEWSLPEGTRPEDVNMMESPGLVTFMGTPLQAV 494          
BLAST of CB304990 vs. ExPASy Swiss-Prot
Match: C71DC_CATRO (Tabersonine 16-hydroxylase (Fragment) OS=Catharanthus roseus GN=CYP71D12 PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 7.934e-26
Identity = 54/137 (39.42%), Postives = 79/137 (57.66%), Query Frame = -2
Query:  233 AVVKEXXXXXXXXXXXXXXXXXKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDNHNMDMEDKFGLTVQKAQPLHAVP 643
            AV+KE                 +  +I G+T+P  ++V VN WAIGRD + W  P  F P+RFL S  DFKG +FE +PFG GRRICPG+  A+  + L L  L+  FDW+ +   ++M++  G+TV++   L+  P
Sbjct:  350 AVIKETLRLHPPVPLLLPRECREQCKIKGYTIPSKSRVIVNAWAIGRDPNYWIEPEKFNPDRFLESKVDFKGNSFEYLPFGGGRRICPGITFALANIELPLAQLLFHFDWQSNTEKLNMKESRGVTVRREDDLYLTP 486          
BLAST of CB304990 vs. ExPASy Swiss-Prot
Match: F3PH_PETHY (Flavonoid 3'-monooxygenase OS=Petunia hybrida GN=CYP75B2 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.036e-25
Identity = 61/145 (42.07%), Postives = 87/145 (60.00%), Query Frame = -2
Query:  233 AVVKEXXXXXXXXXXXXXXXXXKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSN----ADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAQPLHAVP 643
            A+VKE                 +  EI G+ +PKG+ + +NVWAI RD + W +P  F PERFL        D +G +FE+IPFGAGRRIC G+ L IRM+ LM+ +LI++F+W L +      ++ME+ +GLT+Q+A PL   P
Sbjct:  357 AIVKETFRLHPSTPLSLPRIASESCEINGYFIPKGSTLLLNVWAIARDPNAWADPLEFRPERFLPGGEKPKVDVRGNDFEVIPFGAGRRICAGMNLGIRMVQLMIATLIHAFNWDLVSGQLPEMLNMEEAYGLTLQRADPLVVHP 501          
BLAST of CB304990 vs. ExPASy Swiss-Prot
Match: F3PH_ARATH (Flavonoid 3'-monooxygenase OS=Arabidopsis thaliana GN=CYP75B1 PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.036e-25
Identity = 60/145 (41.38%), Postives = 81/145 (55.86%), Query Frame = -2
Query:  233 AVVKEXXXXXXXXXXXXXXXXXKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLG----SNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAQPLHAVP 643
            AV+KE                 +  EI G+ +PKG+ +  N+WAI RD   W +P  F PERFL     S  D KG +FELIPFGAGRRIC GL L +R +  +  +L+  FDW+L        ++ME+ +GLT+Q+A PL   P
Sbjct:  355 AVIKENFRLHPPTPLSLPHIASESCEINGYHIPKGSTLLTNIWAIARDPDQWSDPLAFKPERFLPGGEKSGVDVKGSDFELIPFGAGRRICAGLSLGLRTIQFLTATLVQGFDWELAGGVTPEKLNMEESYGLTLQRAVPLVVHP 499          
BLAST of CB304990 vs. ExPASy Swiss-Prot
Match: C84A1_ARATH (Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CYP84A1 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.768e-25
Identity = 58/119 (48.74%), Postives = 75/119 (63.03%), Query Frame = -2
Query:  233 DVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNA-DFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAQPLHAVP 574
            D  I GF +PK ++V +N +AIGRD ++W +P TF P RFL     DFKG NFE IPFG+GRR CPG+ L +  L L +  +++ F WKL +      +DM D FGLT  KA  L AVP
Sbjct:  394 DTSIDGFFIPKKSRVMINAFAIGRDPTSWTDPDTFRPSRFLEPGVPDFKGSNFEFIPFGSGRRSCPGMQLGLYALDLAVAHILHCFTWKLPDGMKPSELDMNDVFGLTAPKATRLFAVP 512          
The following BLAST results are available for this feature:
BLAST of CB304990 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 187
Match NameE-valueIdentityDescription
C93A3_SOYBN3.561e-2646.55Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=... [more]
C71BU_ARATH3.561e-2647.46Cytochrome P450 71B31 OS=Arabidopsis thaliana GN=C... [more]
C71B4_ARATH3.561e-2646.55Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CY... [more]
C71B8_ARATH4.651e-2645.76Cytochrome P450 71B8 OS=Arabidopsis thaliana GN=CY... [more]
C71A6_NEPRA6.075e-2641.13Cytochrome P450 71A6 (Fragment) OS=Nepeta racemosa... [more]
C98A1_SORBI7.934e-2641.43Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1... [more]
C71DC_CATRO7.934e-2639.42Tabersonine 16-hydroxylase (Fragment) OS=Catharant... [more]
F3PH_PETHY1.036e-2542.07Flavonoid 3'-monooxygenase OS=Petunia hybrida GN=C... [more]
F3PH_ARATH1.036e-2541.38Flavonoid 3'-monooxygenase OS=Arabidopsis thaliana... [more]
C84A1_ARATH1.768e-2548.74Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CY... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0003_IIaR_C08 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0003_IIaR_C08 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304990 ID=CB304990; Name=CB304990; organism=Citrus sinensis; type=EST; length=644bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGATGCTATTAAATCGCATGA
CTTTATAGTTTATTGAAGATTAACTCCGTTAAGTTGCGTGTCTACATAAA
AAAAAATAAGAGCGCCCACACCTGAGAATGATTACACACACATATAACTA
ACCACCAAGCGCTTTATATAGTGGCTACCACCAAGCGCTTTATATATTGG
CTACGAACTATAGTATAGAACTAGATGGCACCAGGGACAGCATGAAGGGG
TTGAGCCTTCTGTACGGTGAGGCCAAATTTATCTTCCATGTCCATGTTGT
GGTTATCAAGCTTCCAATCAAAAGAGTTAATAAGTGAACCCAACATTAGA
TGTAACATTCTGATTGCCAATGGTAAACCAGGACAAATTCGTCGTCCAGC
TCCGAAGGGAATTAGCTCAAAATTCTGGCCTTTGAAATCAGCATTTGACC
CTAAGAACCTTTCGGGAATAAAAGTGTGAGGGTTGTCCCATGTGCTTTCA
TCTCTGCCAATAGCCCATACATTGACAAAAACTTGTGCACCTTTTGGCAC
TGTGAAGCCTGCAATTTCAACATCTTTTGTGGCTTTGCGGGGAAGTAATA
AGGGAGCTGCAGGGTGCAATCTCAAAGTTTCTTTAACAACAGCT
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