CB304996

Overview
NameCB304996
Unique NameCB304996
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length614
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB304996 vs. ExPASy Swiss-Prot
Match: CYT7_ARATH (Cysteine proteinase inhibitor 7 OS=Arabidopsis thaliana GN=CYS7 PE=2 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 4.352e-15
Identity = 40/93 (43.01%), Postives = 59/93 (63.44%), Query Frame = -1
Query:  309 LGGVRNVEATANN-QEIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXSGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNPVAQS 584
            LGG  + +   N  +EI ++A FAV EHN+++N+ L+            +G LY +TLE +E G+KK++EAKVW KPWM FK+L+EF  +  S
Sbjct:   45 LGGFSDSKNDWNGGKEIDDIALFAVQEHNRRENAVLELARVLKATEQVVAGKLYRLTLEVIEAGEKKIYEAKVWVKPWMNFKQLQEFKNIIPS 137          
BLAST of CB304996 vs. ExPASy Swiss-Prot
Match: CYT3_ORYSJ (Cysteine proteinase inhibitor 3 OS=Oryza sativa subsp. japonica GN=Os05g0409300 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 8.207e-14
Identity = 40/97 (41.24%), Postives = 55/97 (56.70%), Query Frame = -1
Query:  294 LGGVRNVEATANNQEIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXSGTLYDITLEAVEGGQKKLFEAKVWEKPWMQFKELKEFNPVAQSHSSTA 584
            L  +R  +A A +      ARFAV E+NK Q + L+F           +GTL+D+ LE V+ G+K L+ AKVW KPW+ FK + EF  V  S S +A
Sbjct:   50 LAAIRREQAEAEDA-----ARFAVAEYNKNQGAELEFARIVKAKRQVVTGTLHDLMLEVVDSGKKSLYSAKVWVKPWLDFKAVVEFRHVGDSQSQSA 141          
BLAST of CB304996 vs. ExPASy Swiss-Prot
Match: CYT2_ORYSJ (Cysteine proteinase inhibitor 2 OS=Oryza sativa subsp. japonica GN=Os05g0494200 PE=2 SV=3)

HSP 1 Score: 70.0922 bits (170), Expect = 1.003e-11
Identity = 37/91 (40.66%), Postives = 52/91 (57.14%), Query Frame = -1
Query:  318 LGGVRNVEATANNQ-EIVNLARFAVDEHNKKQNSNLQFXXXXXXXXXXXSGTLYDITLEAVE-GGQKKLFEAKVWEKPWMQFKELKEFNPV 584
            +GG+ +  A   N    V LARFAV EHN K N+ L+             G ++ +T+E  E GG  KL+EAKVWE+ W  FK+L++F P+
Sbjct:   56 VGGIHDAPAGRENDLTTVELARFAVAEHNSKANAMLELERVVKVRQQVVGGFMHYLTVEVKEPGGANKLYEAKVWERAWENFKQLQDFKPL 146          
The following BLAST results are available for this feature:
BLAST of CB304996 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
CYT7_ARATH4.352e-1543.01Cysteine proteinase inhibitor 7 OS=Arabidopsis tha... [more]
CYT3_ORYSJ8.207e-1441.24Cysteine proteinase inhibitor 3 OS=Oryza sativa su... [more]
CYT2_ORYSJ1.003e-1140.66Cysteine proteinase inhibitor 2 OS=Oryza sativa su... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0003_IIaR_D07 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0003_IIaR_D07 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304996 ID=CB304996; Name=CB304996; organism=Citrus sinensis; type=EST; length=614bp
TTTTTTTTTTTTTTTTTTNNNNTTTTTTTTAAAAGAGATTAATCTTGTAT
ATATATTAAACACCAAAGGTCATTTCAATTATTTTTCACACAGTTATAAA
AGTTGCGCTGAGTTGCAGCTACTACCATAAATAATCGACACATAACTTGC
AAAAGATTAAAGAACCAAACTCATAAGTCCGGTTACATTTATTTTTATAA
TCTGAACATGGTTATAGCTCCATTCTTATTGATACTGTCTCTTTGTTTGA
TCCATTGCAAGCTACAGATGTCATCTTCAGTCACCACAAGCTAAGCGGTT
GAGGAGTGAGACTGAGCAACAGGATTGAATTCTTTCAACTCCTTGAATTG
CATCCAAGGCTTCTCCCAGACCTTAGCTTCAAAAAGTTTCTTCTGACCTC
CTTCAACAGCCTCCAAGGTGATGTCGTACAGAGTCCCTGAAACCACTTGC
TGCTTCGCACTTACAACTTTTACAAATTGCAGATTTGAATTCTGCTTCTT
GTTATGCTCATCCACAGCGAAGCGTGCGAGATTAACGATCTCCTGATTGT
TGGCTGTTGCTTCAACGTTACGAACACCGCCCAATGTAGCCATTGTTTTC
TGCGTAAGTCTCCC
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