CB304997
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304997 vs. ExPASy Swiss-Prot
Match: RL12_HUMAN (60S ribosomal protein L12 OS=Homo sapiens GN=RPL12 PE=1 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 5.030e-48 Identity = 91/132 (68.94%), Postives = 111/132 (84.09%), Query Frame = -1 Query: 141 GPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVEIP 536 GPLGLSPKK+G+DIAK T DWKGLR+TVKLT+QNRQA++ VVPSA+AL+IKALKEP RDRKK KNIKH+GNIT D+++ IA+ MR RS+A++LSGT+KEILGT SVGC VDG+ P D+ +I G VE P Sbjct: 33 GPLGLSPKKVGDDIAKATG-DWKGLRITVKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRSLARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAVECP 163
BLAST of CB304997 vs. ExPASy Swiss-Prot
Match: RL12_BOVIN (60S ribosomal protein L12 OS=Bos taurus GN=RPL12 PE=2 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 5.030e-48 Identity = 91/132 (68.94%), Postives = 111/132 (84.09%), Query Frame = -1 Query: 141 GPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVEIP 536 GPLGLSPKK+G+DIAK T DWKGLR+TVKLT+QNRQA++ VVPSA+AL+IKALKEP RDRKK KNIKH+GNIT D+++ IA+ MR RS+A++LSGT+KEILGT SVGC VDG+ P D+ +I G VE P Sbjct: 33 GPLGLSPKKVGDDIAKATG-DWKGLRITVKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRSLARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAVECP 163
BLAST of CB304997 vs. ExPASy Swiss-Prot
Match: RL12_CHILA (60S ribosomal protein L12 OS=Chinchilla lanigera GN=RPL12 PE=2 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 2.497e-47 Identity = 90/132 (68.18%), Postives = 111/132 (84.09%), Query Frame = -1 Query: 141 GPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVEIP 536 GPLGLSPKK+G+DIAK T DWKGLR+TVKLT+QNRQA++ VVPSA+AL+IKALKEP RDRKK KNIKH+GNIT D+++ IA+ MR RS+A++LSGT+KEILGT SVGC VD + P D+ +I +G VE P Sbjct: 33 GPLGLSPKKVGDDIAKATG-DWKGLRITVKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRSLARELSGTIKEILGTAQSVGCNVDNRHPHDIIDDINNGVVECP 163
BLAST of CB304997 vs. ExPASy Swiss-Prot
Match: RL12_NEUCR (60S ribosomal protein L12 OS=Neurospora crassa GN=rpl-12 PE=3 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 1.049e-45 Identity = 87/132 (65.91%), Postives = 111/132 (84.09%), Query Frame = -1 Query: 141 GPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVEIP 536 GPLGLSPKK+GEDIAK T DWKGLRVTVKLT+QNRQA V+VVP+A+ALVI+ALKEP RDRKK KNIKHN +++ D+++EIA+ MR +S +K+L GTV E+LGT SVGC VDGK P+ +Q+ I G++++P Sbjct: 33 GPLGLSPKKVGEDIAKATG-DWKGLRVTVKLTIQNRQAAVSVVPTASALVIRALKEPPRDRKKEKNIKHNKSVSFDEIVEIARTMRFKSFSKELKGTVLEVLGTAFSVGCQVDGKSPKAVQEAIHAGEIDVP 163
BLAST of CB304997 vs. ExPASy Swiss-Prot
Match: RL12_DICDI (60S ribosomal protein L12 OS=Dictyostelium discoideum GN=rpl12 PE=3 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 7.036e-42 Identity = 84/131 (64.12%), Postives = 106/131 (80.92%), Query Frame = -1 Query: 144 GPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVEI 536 GPLG+SPKK+G+DIAK T + WKG++V+VKLT+QNR A V+PSA+ALVIKALKEP RDRKK KNIKHNGNI L+++ +IAK MR +S+A D G+V EILGT SVGC V+GK PRD+Q I G++E+ Sbjct: 33 GPLGVSPKKVGDDIAKAT-QPWKGMKVSVKLTIQNRIAVPEVLPSASALVIKALKEPPRDRKKEKNIKHNGNIPLEEICKIAKTMRFKSLAVDFKGSVLEILGTAHSVGCKVNGKSPRDIQAGIQSGEIEV 162
BLAST of CB304997 vs. ExPASy Swiss-Prot
Match: RL12_YEAST (60S ribosomal protein L12 OS=Saccharomyces cerevisiae GN=RPL12A PE=1 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 2.047e-41 Identity = 83/132 (62.88%), Postives = 106/132 (80.30%), Query Frame = -1 Query: 141 GPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVEIP 536 GPLGLSPKK+GEDIAK T K++KG++VTV+L +QNRQA +VVPSA++LVI ALKEP RDRKK KN+KH+GNI LD++IEIA+ MR +S + L+ KEILGT SVGC VD K+P D+ + I G++EIP Sbjct: 33 GPLGLSPKKVGEDIAKAT-KEFKGIKVTVQLKIQNRQAAASVVPSASSLVITALKEPPRDRKKDKNVKHSGNIQLDEIIEIARQMRDKSFGRTLASVTKEILGTAQSVGCRVDFKNPHDIIEGINAGEIEIP 163
BLAST of CB304997 vs. ExPASy Swiss-Prot
Match: RL12_ENCCU (60S ribosomal protein L12 OS=Encephalitozoon cuniculi GN=RPL12 PE=1 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 4.417e-36 Identity = 74/133 (55.64%), Postives = 103/133 (77.44%), Query Frame = -1 Query: 141 GPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMR-PRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVEIP 536 GPLGLS K +GEDI K TA D+K L+V V+L +++R+A V V PS A L+IK+LKEP RDRKK KNI HNG++ + +V++IA++ R RS + LSGTVKE+LGTC S+GC VDGK P+++ +EI G++++P Sbjct: 33 GPLGLSSKVVGEDIKKATA-DYKSLKVHVQLAIKDRKATVEVQPSVATLIIKSLKEPPRDRKKEKNILHNGSLRMTEVVDIARIARSSRSYSNSLSGTVKEVLGTCKSIGCKVDGKCPKEVTREIDAGEIKLP 164
BLAST of CB304997 vs. ExPASy Swiss-Prot
Match: RL11_THEON (50S ribosomal protein L11P OS=Thermococcus onnurineus (strain NA1) GN=rpl11p PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 2.435e-18 Identity = 53/133 (39.85%), Postives = 84/133 (63.16%), Query Frame = -1 Query: 156 GPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKV----AVVPSAAALVIKALKEPERDRKKTKNIKHN--GNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDG 536 GPLGL+ K++ ++I K T KD++G++V VK+ V++ + K VP + L+ K L P K + H+ GN+T++ VI IAK + +A DL KE++GT +S+G TV+GKDPR++Q+EI +G Sbjct: 25 GPLGLNVKQVVDEINKAT-KDFEGMQVPVKIIVEDPKKKTFRIEVGVPPVSQLIKKELGIP----KGSSEAGHSPVGNLTMEQVIRIAKAKMDQMLAADLKAAAKEVIGTALSMGVTVEGKDPREVQKEIDEG 152
BLAST of CB304997 vs. ExPASy Swiss-Prot
Match: RL11_THEAC (50S ribosomal protein L11P OS=Thermoplasma acidophilum GN=rpl11p PE=3 SV=2) HSP 1 Score: 90.8929 bits (224), Expect = 4.153e-18 Identity = 50/135 (37.04%), Postives = 84/135 (62.22%), Query Frame = -1 Query: 144 GPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAK----VAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVEI 536 GPLGL+ ++ ++I ++T K+++G+RV V +TV + + K +P +AL+ K L + K+ + I GN TLD ++++AK +A DL E+LGTCVS+G VDGKDP+++Q++I G++ I Sbjct: 25 GPLGLNVAQVVKEINEKT-KEFQGMRVPVTITVVDPETKKYEITVGIPPTSALLKKKLGIEKGAAKRKEAIA--GNATLDQIVDVAKTKMASMLASDLKAATLEVLGTCVSMGINVDGKDPKEVQRQIKAGEISI 156
BLAST of CB304997 vs. ExPASy Swiss-Prot
Match: RL11_ARCFU (50S ribosomal protein L11P OS=Archaeoglobus fulgidus GN=rpl11p PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 9.253e-18 Identity = 51/134 (38.06%), Postives = 86/134 (64.18%), Query Frame = -1 Query: 141 GPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQN-RQAKVAV-VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVEIP 536 GPLGL+ K++ + I E KD++GL V VK+ V++ R ++ V +P +AL+ + L + + + GN+T++ ++ IA++ R +S++ L VKE+LGTC S+G TV+GK P++L + I +G VEIP Sbjct: 25 GPLGLNVKQVVDKI-NEATKDYEGLSVPVKIIVKDDRSFEIEVGIPPVSALIKRELGIEKGASNPGREVV--GNLTMEQLLNIARIKRQQSLSYTLKEVVKEVLGTCNSMGITVEGKSPKELTRMIEEGQVEIP 155 The following BLAST results are available for this feature:
BLAST of CB304997 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 62
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304997 ID=CB304997; Name=CB304997; organism=Citrus sinensis; type=EST; length=539bpback to top |