CB304997
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304997 vs. ExPASy Swiss-Prot
Match: RL11_PYRFU (50S ribosomal protein L11P OS=Pyrococcus furiosus GN=rpl11p PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 3.516e-17 Identity = 53/132 (40.15%), Postives = 84/132 (63.64%), Query Frame = -1 Query: 156 GPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQ--NRQAKVAV-VPSAAALVIKALKEPERDRKKTKNIKHN--GNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDG 536 GPLGL+ K++ + I E KD+ G++V VK+ V +Q ++ V VP + L+ K L K + KHN GN+T++ VI+IAK+ + + +A L KE++GT +S+G TV+GKDPR++Q+EI +G Sbjct: 26 GPLGLNVKQVVDKI-NEATKDFAGMQVPVKIIVDPVTKQFEIEVGVPPTSQLIKKELGL----EKGSGEPKHNIVGNLTMEQVIKIAKMKKDQMLALTLKAAAKEVIGTALSMGVTVEGKDPREVQKEIDEG 152
BLAST of CB304997 vs. ExPASy Swiss-Prot
Match: RL11_PYRKO (50S ribosomal protein L11P OS=Pyrococcus kodakaraensis GN=rpl11p PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 4.592e-17 Identity = 50/133 (37.59%), Postives = 85/133 (63.91%), Query Frame = -1 Query: 156 GPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKV----AVVPSAAALVIKALKEPERDRKKTKNIKHN--GNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDG 536 GPLGL+ K++ ++I K T K+++G++V VK+ V++ + K +P + L+ K L P K + H GN+T++ VI+IAK+ + +A +L KE++GT +S+G TV+GKDPR++Q+EI +G Sbjct: 25 GPLGLNVKQVVDEINKAT-KEFEGMQVPVKIIVEDPKKKTFRIEVGIPPTSQLIKKELGIP----KGSSEAGHTPAGNLTMEQVIKIAKMKIDQMLAPNLKAAAKEVIGTALSMGVTVEGKDPREVQREIDEG 152
BLAST of CB304997 vs. ExPASy Swiss-Prot
Match: RL11_PYRAB (50S ribosomal protein L11P OS=Pyrococcus abyssi GN=rpl11p PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 5.998e-17 Identity = 53/132 (40.15%), Postives = 84/132 (63.64%), Query Frame = -1 Query: 156 GPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQ--NRQAKVAV-VPSAAALVIKALKEPERDRKKTKNIKHN--GNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDG 536 GPLGL+ K++ + I E K++ G++V VK+ V +Q ++ V VP + L+ K L K + KHN GN+T++ VI+IAK+ R + +A L KE++GT +S+G TV+GKDPR++Q+EI +G Sbjct: 26 GPLGLNVKQVVDKI-NEATKEFAGMQVPVKIIVDPVTKQFEIEVGVPPTSQLIKKELGL----EKGSGEPKHNIVGNLTMEQVIKIAKMKRNQMLALTLKAAAKEVIGTALSMGVTVEGKDPREVQREIDEG 152
BLAST of CB304997 vs. ExPASy Swiss-Prot
Match: RL11_THEGJ (50S ribosomal protein L11P OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=rpl11p PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.745e-16 Identity = 48/131 (36.64%), Postives = 84/131 (64.12%), Query Frame = -1 Query: 156 GPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKV----AVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDG 536 GPLGL+ K++ ++I K T K+++G++V VK+ V++ + K +P + L+ K L P+ + + GN+T++ VI+IAK+ + +A L KE++GT +S+G TV+GKDPR++Q+EI +G Sbjct: 25 GPLGLNVKQVVDEINKAT-KEFEGMQVPVKIIVEDPKKKTFRIEVGIPPTSQLIKKELGIPKGSSEPVHSPV--GNLTMEQVIKIAKMKIDQMLAPTLKAASKEVIGTALSMGVTVEGKDPREVQREIDEG 152
BLAST of CB304997 vs. ExPASy Swiss-Prot
Match: RL11_PYRHO (50S ribosomal protein L11P OS=Pyrococcus horikoshii GN=rpl11p PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.745e-16 Identity = 53/132 (40.15%), Postives = 83/132 (62.88%), Query Frame = -1 Query: 156 GPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQ--NRQAKVAV-VPSAAALVIKALKEPERDRKKTKNIKHN--GNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDG 536 GPLGL+ K++ + I E K++ G++V VK+ V +Q ++ V VP + L+ K L K + KHN GN+T++ VI+IAK+ R + +A L KE++GT +S+G TV+GKDPR +Q+EI +G Sbjct: 26 GPLGLNVKQVVDKI-NEATKEFAGMQVPVKIIVDPVTKQFEIEVGVPPTSQLIKKELGL----EKGSGEPKHNIVGNLTMEQVIKIAKMKRSQMLALTLKAAAKEVIGTALSMGVTVEGKDPRIVQREIDEG 152
BLAST of CB304997 vs. ExPASy Swiss-Prot
Match: RL11_METJA (50S ribosomal protein L11P OS=Methanocaldococcus jannaschii GN=rpl11p PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 2.279e-16 Identity = 48/130 (36.92%), Postives = 80/130 (61.54%), Query Frame = -1 Query: 156 GPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAV---VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDG 536 GPLG++ ++ ++I ++T KD++G++V VK+ V K + +P AL+ K L + + GN+TL+ VI+IAK+ + ++ L VKE+LGTC S+G TV+GKDP+++Q+EI G Sbjct: 26 GPLGVNVMQVVKEINEKT-KDYEGMQVPVKVIVDTETRKFEIEVGIPPTTALIKKELGIETAAHEPRHEVV--GNLTLEQVIKIAKMKKDAMLSYTLKNAVKEVLGTCGSMGVTVEGKDPKEVQKEIDAG 152
BLAST of CB304997 vs. ExPASy Swiss-Prot
Match: RL11_THEVO (50S ribosomal protein L11P OS=Thermoplasma volcanium GN=rpl11p PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 6.631e-16 Identity = 49/135 (36.30%), Postives = 83/135 (61.48%), Query Frame = -1 Query: 144 GPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAK----VAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVEI 536 GPLGL+ ++ ++I ++T K+++G++V V +TV + + K VP +AL+ K L + KK + + GN TL+ + +A P +AKDL V E+LGTCV++G V+GKDP+++Q+ I G ++I Sbjct: 25 GPLGLNVAQVVKEINEKT-KEFQGMQVPVTVTVIDPETKKYEITVGVPPTSALLKKELGLEKGASKKKEAVA--GNATLEQIKNVAIKKMPSMLAKDLKSAVLEVLGTCVAMGINVEGKDPKEVQKLIKSGQIKI 156
BLAST of CB304997 vs. ExPASy Swiss-Prot
Match: RL11_METKA (50S ribosomal protein L11P OS=Methanopyrus kandleri GN=rpl11p PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.477e-15 Identity = 47/129 (36.43%), Postives = 86/129 (66.67%), Query Frame = -1 Query: 156 GPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTV--QNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDG 536 GPLG++ +++ E+I ++T KD+KG+ V VK+ V + R+ +V V + +IK+ ++ + ++ + G+++++ VI+IAK+ ++ DL KEILGTC S+G TV+GKDP+++Q+EI +G Sbjct: 26 GPLGVNIQEVVEEINRKT-KDFKGMEVPVKIIVDTETREFEVKVGSPPTSAIIKSELGIDKGAHEPRH-ETVGDLSMEQVIKIAKMKFDDLLSYDLKTAAKEILGTCGSMGVTVEGKDPKEVQKEIDEG 152
BLAST of CB304997 vs. ExPASy Swiss-Prot
Match: RL11_PICTO (50S ribosomal protein L11P OS=Picrophilus torridus GN=rpl11p PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 5.613e-15 Identity = 48/135 (35.56%), Postives = 85/135 (62.96%), Query Frame = -1 Query: 144 GPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAK----VAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVEI 536 GPLGL+ ++ +DI ++T K++ G++V V + V + K + VP +AL+ K L + KK + I GN TL+ + ++A+ R ++ ++ G V E+LG+ VS+G TVDG+DP+++Q+ I +G++EI Sbjct: 24 GPLGLNLGQVVKDINEKT-KNFAGMQVPVTVNVIDPATKKYEIIVGVPPTSALLKKELGIEKGASKKKEKIA--GNATLEQIKKVAESKRSALLSYNMKGAVLEVLGSAVSLGITVDGRDPKEVQKMIKNGEIEI 155
BLAST of CB304997 vs. ExPASy Swiss-Prot
Match: RL11_METTH (50S ribosomal protein L11P OS=Methanobacterium thermoautotrophicum GN=rpl11p PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 5.613e-15 Identity = 47/130 (36.15%), Postives = 82/130 (63.08%), Query Frame = -1 Query: 156 GPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQN--RQAKVAV-VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDG 536 GPLG++ ++ E+I ++TA D++G++V VK+ V R +V V P AL++ LK + + + +I+++ V++IA++ ++ D VKEI+GTCVS+G TV+GKDPR++Q+E+ G Sbjct: 26 GPLGINMMQVVEEINRKTA-DFEGMKVPVKIIVDTDTRDFEVEVGTPPTTALIMDELKLEKGSQDP--GMDKIADISMEQVLKIARMKFDALLSNDYKRAVKEIMGTCVSMGITVNGKDPREVQREVDQG 152 The following BLAST results are available for this feature:
BLAST of CB304997 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 62
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304997 ID=CB304997; Name=CB304997; organism=Citrus sinensis; type=EST; length=539bpback to top |