CB304997
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304997 vs. ExPASy Swiss-Prot
Match: RL11_METVS (50S ribosomal protein L11P OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rpl11p PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.133e-14 Identity = 44/133 (33.08%), Postives = 79/133 (59.40%), Query Frame = -1 Query: 147 GPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAV---VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVE 536 GPLG++ ++ + I +T KD++G+ V VK+ V+ + V +P A+AL+ K L ++ + GNIT++ +++IAK+ + +A L KE++GTCVSVG V+GK P++ Q+ + G+ + Sbjct: 26 GPLGVNIMQVVQMINTKT-KDYEGMSVPVKVIVETTKRTFEVEVGIPPASALIKKELGLESGSQEPKHKVA--GNITMEKIVKIAKMKQDAMLAYTLKSAAKEVIGTCVSVGVNVEGKTPKEAQKAVDAGEFD 155
BLAST of CB304997 vs. ExPASy Swiss-Prot
Match: RL11_METHJ (50S ribosomal protein L11P OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=rpl11p PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.133e-14 Identity = 45/130 (34.62%), Postives = 77/130 (59.23%), Query Frame = -1 Query: 156 GPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQ---AKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDG 536 GPLG++ K + ++I K+TA + G++V V++ V ++ V + P+ A ++ +A E TK + G++ L+ + IAK+ ++ DL VKE++GTCVS+G TV GK P+D+ +EI G Sbjct: 25 GPLGINVKAVVDEINKKTAS-FNGMQVPVRVEVDEKKNFTISVGIPPTTALIMKEAGVEKGSGEPNTKIV---GDVPLEAAVTIAKMKLDDMLSYDLKNAVKEVVGTCVSLGITVSGKKPKDMLKEIDSG 150
BLAST of CB304997 vs. ExPASy Swiss-Prot
Match: RL11_METMJ (50S ribosomal protein L11P OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=rpl11p PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 2.786e-14 Identity = 46/132 (34.85%), Postives = 79/132 (59.85%), Query Frame = -1 Query: 147 GPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAVV--PSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVE 536 GPLG++ K + +DI K+TA ++ G++V V +TV +++ V P ALV+K + + + G++ L+ + IA++ ++ DL VKE+LGTCVSVG TV+GK PR++ Q + +G+ + Sbjct: 25 GPLGINVKAVVDDINKKTA-EFNGMQVPVTVTVDDKKNFTIEVGIPPTTALVMKEAGITKGSTEPGALVA--GDLPLEAAVRIARMKFDGMLSYDLKSAVKEVLGTCVSVGVTVEGKKPREMIQAVNNGEYD 153
BLAST of CB304997 vs. ExPASy Swiss-Prot
Match: RL11_KORCO (50S ribosomal protein L11P OS=Korarchaeum cryptofilum (strain OPF8) GN=rpl11p PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 3.639e-14 Identity = 44/130 (33.85%), Postives = 77/130 (59.23%), Query Frame = -1 Query: 156 GPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAV---VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDG 536 G LGL+ +I ++I ++T+ + G+RV V++ V K + P + L+++ LK + +K I GN+ ++ V+ IAK+ S +L VK++LGT +S+G TV+GKDPR++Q+E+ G Sbjct: 26 GGLGLNMGQIVKEINEKTSS-YSGMRVPVEIEVDTETKKFEIRVGTPPTSMLILRELKAEKGSSDASKKI---GNLKMETVVNIAKMKLASSNTPELKQVVKQVLGTALSMGVTVEGKDPREVQREVDSG 151
BLAST of CB304997 vs. ExPASy Swiss-Prot
Match: RL11_UNCMA (50S ribosomal protein L11P OS=Uncultured methanogenic archaeon RC-I GN=rpl11p PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 4.752e-14 Identity = 46/129 (35.66%), Postives = 76/129 (58.91%), Query Frame = -1 Query: 156 GPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQ-NRQAKVAV-VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDG 536 GPLG++ KK+ ++I +T KD+ G+ V VK+ V +R V V P +ALV+ LK + T N G++T++ I++A++ R ++ L VKE+ GTCVS+G ++GK P++ E+ G Sbjct: 25 GPLGINIKKVVDEINNKT-KDYNGMTVPVKVIVDASRNFTVEVGTPPTSALVLSELKLEKGSG--TPNTNFIGSLTIEQAIKVAQMKRDAMLSYTLKNAVKEVAGTCVSLGVMIEGKKPKEFIAEVNAG 150
BLAST of CB304997 vs. ExPASy Swiss-Prot
Match: RL11_HYPBU (50S ribosomal protein L11P OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=rpl11p PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 8.106e-14 Identity = 49/130 (37.69%), Postives = 71/130 (54.62%), Query Frame = -1 Query: 156 LGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAVV---PSAAALVIKAL--KEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDG 530 LGL K+ EDI K T K +KG V VKL V + + P+ L++KA+ EP D K G++ + ++EIA + +P AK L VK ILG+ S+G TVDGKDP+ + +E+ +G Sbjct: 28 LGLDVNKVVEDINKATEK-YKGFEVAVKLIVDENTKEYEIEVKPPTTTELLLKAVGASEPSGDPMHQKI----GDLPFEKIVEIAILKKPSLNAKTLKAAVKTILGSARSIGITVDGKDPKQVTKEVEEG 152
BLAST of CB304997 vs. ExPASy Swiss-Prot
Match: RL11_METS5 (50S ribosomal protein L11P OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=rpl11p PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.059e-13 Identity = 52/132 (39.39%), Postives = 73/132 (55.30%), Query Frame = -1 Query: 156 LGLSPKKIGEDIAK--ETAKDWKGLRVTVKLTVQNRQAKVAV---VPSAAALVIK--ALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDG 530 LGL+ +GE + K E +KG+ V V L V K V VP+ +L++K P D + K GNI++DDVIE+A +P AK+L G VK ILGT S+G TVD KDP+ + +E+ +G Sbjct: 28 LGLN---VGEVVKKINEATSQFKGMTVPVTLDVDTDTKKYEVSVGVPTTTSLLVKKAGASGPSGDPEHKKI----GNISMDDVIEVAISKKPSLTAKELKGAVKSILGTAKSIGLTVDNKDPKLVVREVEEG 152
BLAST of CB304997 vs. ExPASy Swiss-Prot
Match: RL11_METPE (50S ribosomal protein L11P OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=rpl11p PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.059e-13 Identity = 45/136 (33.09%), Postives = 83/136 (61.03%), Query Frame = -1 Query: 135 GPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQ-AKVAV-VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVEIPLD 536 GPLG++ K + +DI K+TA ++ G++V VK+ V +++ ++V +P ALV+K + + + I G++ ++ + IA++ ++ +L VKE++GTCVSVG TVDGK P+++ I+ G + L+ Sbjct: 25 GPLGINVKAVVDDINKKTA-EFNGMQVPVKIEVDDKKNVTISVGIPPTTALVMKEVGIEKGSAEPNSIIV--GDLPIEAAVRIARMKLDDMLSYELKTAVKEVIGTCVSVGVTVDGKKPKEILAAISAGQYDSVLE 157
BLAST of CB304997 vs. ExPASy Swiss-Prot
Match: RL11_METM7 (50S ribosomal protein L11P OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rpl11p PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 3.080e-13 Identity = 44/133 (33.08%), Postives = 75/133 (56.39%), Query Frame = -1 Query: 147 GPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAV---VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVE 536 GPLG++ ++ + I E KD+ G+ V VK+ V + V +P A+ALV K L ++ + GN+T++ V++IAK+ + +A +L KE++GTCVSVG V+G P++ Q+ + G + Sbjct: 26 GPLGVNIMQVVQKI-NEMTKDYDGMSVPVKVIVNTDKRTFEVEVGIPPASALVKKELGITTGSQEPKHQVA--GNLTMEQVVKIAKMKQDAMLAYNLKNASKEVIGTCVSVGVNVEGMTPKEAQKAVDAGQFD 155
BLAST of CB304997 vs. ExPASy Swiss-Prot
Match: RL11_METM6 (50S ribosomal protein L11P OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=rpl11p PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 3.080e-13 Identity = 44/133 (33.08%), Postives = 75/133 (56.39%), Query Frame = -1 Query: 147 GPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAV---VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVE 536 GPLG++ ++ + I E KD+ G+ V VK+ V + V +P A+ALV K L ++ + GN+T++ V++IAK+ + +A +L KE++GTCVSVG V+G P++ Q+ + G + Sbjct: 26 GPLGVNIMQVVQKI-NEMTKDYDGMSVPVKVIVNTDKRTFEVEVGIPPASALVKKELGITTGSQEPKHQVA--GNLTMEQVVKIAKMKQDAMLAYNLKNASKEVIGTCVSVGVNVEGMTPKEAQKAVDAGQFD 155 The following BLAST results are available for this feature:
BLAST of CB304997 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 62
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304997 ID=CB304997; Name=CB304997; organism=Citrus sinensis; type=EST; length=539bpback to top |