CB304997
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304997 vs. ExPASy Swiss-Prot
Match: RL11_METBF (50S ribosomal protein L11P OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rpl11p PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 3.080e-13 Identity = 43/129 (33.33%), Postives = 80/129 (62.02%), Query Frame = -1 Query: 156 GPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQ-AKVAV-VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDG 536 GPLG++ K++ E I ++T +D+ G++V VK+ V +++ ++ V P A+L++K L + + GNI++ V +IA++ + ++ DL T+KE++GTCV +G TV+G + RD Q+ + G Sbjct: 25 GPLGVNIKEVVEKINEKT-RDYNGMQVPVKVIVDDKKNVEIEVGTPPTASLIMKELGIQKGSGNAGSEVV--GNISISQVAKIARMKKEDVLSYDLKATMKEVMGTCVPMGVTVEGVEARDSQKALDQG 150
BLAST of CB304997 vs. ExPASy Swiss-Prot
Match: RL11_DESK1 (50S ribosomal protein L11P OS=Desulfurococcus kamchatkensis (strain 1221n / DSM 18924) GN=rpl11p PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 3.080e-13 Identity = 51/139 (36.69%), Postives = 81/139 (58.27%), Query Frame = -1 Query: 156 GGPLG--LSPKKIG-EDIAK---ETAKDWKGLRVTVKLTVQ--NRQAKVAV-VPSAAALVIK--ALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDG 539 G PLG LSP K+ + K + KD++GL V V++T+ ++ +V V +P+ AL++K K+P D K GNI+ + V+++A + R AK L VK +LGT S+G TVDGKDP+++Q+ + +G Sbjct: 18 GPPLGPTLSPYKVNIPQVVKAINDATKDFEGLSVPVEITIDIDTKEFEVRVGIPTTTALLMKEAGAKQPTGDPAHQKI----GNISFEQVVKVAILKRDSLTAKTLRAAVKTVLGTARSIGITVDGKDPKEVQKLVDEG 152
BLAST of CB304997 vs. ExPASy Swiss-Prot
Match: RL11_METMP (50S ribosomal protein L11P OS=Methanococcus maripaludis GN=rpl11p PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 5.254e-13 Identity = 46/135 (34.07%), Postives = 78/135 (57.78%), Query Frame = -1 Query: 147 GPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAV---VPSAAALVIKALKEPERDRKKTKNIKHN--GNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVE 536 GPLG++ ++ + I T KD++G+ V VK+ V + V +P A+AL+ K + K ++ KH GNIT++ +++IAK+ + +A +L KE++GTCVSVG +V+G P + Q+ I G + Sbjct: 26 GPLGVNIMQVVQKINNMT-KDYEGMSVPVKVIVDTDKRTFEVEVGIPPASALIKKEIGI----EKGSQEPKHQVAGNITMEQIVKIAKMKQDAMLAYNLKNASKEVVGTCVSVGISVEGMTPSEAQKAIDAGQFD 155
BLAST of CB304997 vs. ExPASy Swiss-Prot
Match: RL11_METM5 (50S ribosomal protein L11P OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rpl11p PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 8.962e-13 Identity = 44/133 (33.08%), Postives = 75/133 (56.39%), Query Frame = -1 Query: 147 GPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAV---VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVE 536 GPLG++ ++ + I + KD+ G+ V VK+ V + V +P A+ALV K L ++ + GN+T++ V++IAK+ + +A +L KE++GTCVSVG V+G P++ Q+ I G + Sbjct: 26 GPLGVNIMQVVQKI-NDMTKDYDGMSVPVKVIVDTDKRTFEVEVGIPPASALVKKELGIATGAQEPKHQVA--GNLTMEQVVKIAKMKQDAMLAYNLKNASKEVIGTCVSVGVNVEGMTPKEAQKAIDAGQFD 155
BLAST of CB304997 vs. ExPASy Swiss-Prot
Match: RL11_METLZ (50S ribosomal protein L11P OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=rpl11p PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 8.962e-13 Identity = 46/130 (35.38%), Postives = 72/130 (55.38%), Query Frame = -1 Query: 153 GPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAVV--PSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGD 536 GPLG++ K + +DI K+TA ++ G+ V V + V +++ V P ALV+K + T N + GN+ L+ VI IAK+ ++ DL KE++GTCVSVG TV+GK + + G+ Sbjct: 25 GPLGINVKAVVDDINKKTA-EFNGMSVPVTVMVDDKKNVTLTVGIPPTTALVMK--EAGVEKGSGTPNTQAVGNLPLEAVIRIAKMKMESMLSYDLKTAAKEVMGTCVSVGVTVEGKTAKQAIAAVNAGE 151
BLAST of CB304997 vs. ExPASy Swiss-Prot
Match: RL11_METMA (50S ribosomal protein L11P OS=Methanosarcina mazei GN=rpl11p PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.170e-12 Identity = 42/129 (32.56%), Postives = 79/129 (61.24%), Query Frame = -1 Query: 156 GPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQ-AKVAV-VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDG 536 GPLG++ K++ E I ++T +D+ G++V VK+ V +++ ++ V P A+LV+K L + + GN+T+ V +IA++ + ++ DL T+KE++GTCV +G V+G +D Q+ + +G Sbjct: 25 GPLGVNIKEVVEKINEKT-RDYNGMQVPVKVIVDDKKNVEIEVGTPPTASLVMKELGIQKGSGNAGSEVV--GNLTIPQVAKIARMKKEDVLSYDLKATMKEVMGTCVPMGVNVEGMKAKDCQKALDEG 150
BLAST of CB304997 vs. ExPASy Swiss-Prot
Match: RL11_SULAC (50S ribosomal protein L11P OS=Sulfolobus acidocaldarius GN=rpl11p PE=1 SV=3) HSP 1 Score: 72.4034 bits (176), Expect = 1.529e-12 Identity = 45/130 (34.62%), Postives = 77/130 (59.23%), Query Frame = -1 Query: 156 LGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAV---VPSAAALVIKAL--KEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDG 530 LGL+ +++ + I TA+ +KG+ V V + + + K + VP+ +L++KA+ +EP D K GN+ L+ + +IA +P+ AK L+ +K +LGT S+G TV+GKDP+D+ +EI G Sbjct: 28 LGLNVQEVVKKINDVTAQ-FKGMSVPVTIEIDSSTKKYDIKVGVPTTTSLLLKAINAQEPSGDPAHKKI----GNLDLEQIADIAIKKKPQLSAKTLTAAIKSLLGTARSIGITVEGKDPKDVIKEIDQG 152
BLAST of CB304997 vs. ExPASy Swiss-Prot
Match: RL11_SULIM (50S ribosomal protein L11P OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=rpl11p PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.406e-12 Identity = 46/132 (34.85%), Postives = 73/132 (55.30%), Query Frame = -1 Query: 156 LGLSPKKIGEDIAK--ETAKDWKGLRVTVKLTVQNRQAKVAV---VPSAAALVIK--ALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDG 530 LGL+ +GE + K E +KG+ V V + V + K + +P+ AL++K + EP D K GN++L+ VI+IA + +P K L VK +LGT S+G TV+ KDP++L +E+ +G Sbjct: 28 LGLN---VGEVVKKLNEATSSFKGMSVPVTIEVDSNTKKYEIKVGIPTTTALLLKEAGVSEPSGDPAHKKI----GNLSLEQVIKIAIMKKPGLTTKSLKAAVKSMLGTAKSIGVTVENKDPKELVKEVEEG 152
BLAST of CB304997 vs. ExPASy Swiss-Prot
Match: RL11_NITMS (50S ribosomal protein L11P OS=Nitrosopumilus maritimus (strain SCM1) GN=rpl11p PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 4.448e-12 Identity = 41/130 (31.54%), Postives = 74/130 (56.92%), Query Frame = -1 Query: 156 GPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAV---VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDG 536 GPLG++ ++ I +T KD++G++V V + V + K + +PSAAAL++K + + + G++T+D V+++A S A L K I+GTC+++G V+GK P+++ EI +G Sbjct: 26 GPLGVNIMEVINAINDKT-KDFEGMKVPVTVIVDSDTKKYEIEIGIPSAAALIMK--EAGIQKGSGASGTEWAGDVTMDAVVKVANTKLENSYASSLKSVAKTIVGTCLALGVKVEGKTPKEITAEINEG 152
BLAST of CB304997 vs. ExPASy Swiss-Prot
Match: RL11_METS3 (50S ribosomal protein L11P OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=rpl11p PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 4.448e-12 Identity = 38/130 (29.23%), Postives = 76/130 (58.46%), Query Frame = -1 Query: 156 GPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAV---VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDG 536 GP G++ ++ E+I ++A D+ G++V VK+++ + + P +L+++ L + + +I ++ +D ++IA++ +A D VKE++GTCVS+G +VDGKDPR+ Q+++ G Sbjct: 26 GPFGINMMQVVEEINNKSA-DFAGMKVPVKVSIDRDTKEFEIEIGTPPTTSLIMEELGIEKASHEPGADIV--ADLPIDKALKIARMKFDSLLANDYKAGVKEVMGTCVSMGLSVDGKDPREAQKDVDAG 152 The following BLAST results are available for this feature:
BLAST of CB304997 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 62
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304997 ID=CB304997; Name=CB304997; organism=Citrus sinensis; type=EST; length=539bpback to top |