CB304997
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304997 vs. ExPASy Swiss-Prot
Match: RL11_METBU (50S ribosomal protein L11P OS=Methanococcoides burtonii (strain DSM 6242) GN=rpl11p PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 4.448e-12 Identity = 40/129 (31.01%), Postives = 77/129 (59.69%), Query Frame = -1 Query: 156 GPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQN-RQAKVAV-VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDG 536 GPLG++ K + E I ++T KD+ G++V VK+ V + + ++ V P +AL++K L + + + GN+ + V +IA++ + ++ L +KE++GTCV +G T++ DPR+ Q+ + +G Sbjct: 25 GPLGVNIKDVIEKINEKT-KDYNGMQVPVKVIVNDDKSVEIEVGTPPTSALILKELNIEKGSGESGTVVV--GNLEIAQVAKIARMKKDDILSYSLKAAIKEVMGTCVPMGVTIENLDPRECQKAVDEG 150
BLAST of CB304997 vs. ExPASy Swiss-Prot
Match: RL11_SULIY (50S ribosomal protein L11P OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=rpl11p PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 5.809e-12 Identity = 46/132 (34.85%), Postives = 72/132 (54.55%), Query Frame = -1 Query: 156 LGLSPKKIGEDIAK--ETAKDWKGLRVTVKLTVQNRQAKVAV---VPSAAALVIK--ALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDG 530 LGL+ +GE + K E +KG+ V V + V + K + +P+ AL++K EP D K GN++L+ VI+IA + +P K L VK +LGT S+G TV+ KDP++L +E+ +G Sbjct: 28 LGLN---VGEVVKKLNEATSSFKGMSVPVTIEVDSNTKKYEIKVGIPTTTALLLKEAGASEPSGDPAHKKI----GNLSLEQVIKIAIMKKPGLTTKSLKAAVKSMLGTAKSIGVTVENKDPKELVKEVEEG 152
BLAST of CB304997 vs. ExPASy Swiss-Prot
Match: RL11_SULIL (50S ribosomal protein L11P OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=rpl11p PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 5.809e-12 Identity = 46/132 (34.85%), Postives = 72/132 (54.55%), Query Frame = -1 Query: 156 LGLSPKKIGEDIAK--ETAKDWKGLRVTVKLTVQNRQAKVAV---VPSAAALVIK--ALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDG 530 LGL+ +GE + K E +KG+ V V + V + K + +P+ AL++K EP D K GN++L+ VI+IA + +P K L VK +LGT S+G TV+ KDP++L +E+ +G Sbjct: 28 LGLN---VGEVVKKLNEATSSFKGMSVPVTIEVDSNTKKYEIKVGIPTTTALLLKEAGASEPSGDPAHKKI----GNLSLEQVIKIAIMKKPGLTTKSLKAAVKSMLGTAKSIGVTVENKDPKELVKEVEEG 152
BLAST of CB304997 vs. ExPASy Swiss-Prot
Match: RL11_SULIK (50S ribosomal protein L11P OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=rpl11p PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 5.809e-12 Identity = 46/132 (34.85%), Postives = 72/132 (54.55%), Query Frame = -1 Query: 156 LGLSPKKIGEDIAK--ETAKDWKGLRVTVKLTVQNRQAKVAV---VPSAAALVIK--ALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDG 530 LGL+ +GE + K E +KG+ V V + V + K + +P+ AL++K EP D K GN++L+ VI+IA + +P K L VK +LGT S+G TV+ KDP++L +E+ +G Sbjct: 28 LGLN---VGEVVKKLNEATSSFKGMSVPVTIEVDSNTKKYEIKVGIPTTTALLLKEAGASEPSGDPAHKKI----GNLSLEQVIKIAIMKKPGLTTKSLKAAVKSMLGTAKSIGVTVENKDPKELVKEVEEG 152
BLAST of CB304997 vs. ExPASy Swiss-Prot
Match: RL11_SULIA (50S ribosomal protein L11P OS=Sulfolobus islandicus (strain M.16.27) GN=rpl11p PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 5.809e-12 Identity = 46/132 (34.85%), Postives = 72/132 (54.55%), Query Frame = -1 Query: 156 LGLSPKKIGEDIAK--ETAKDWKGLRVTVKLTVQNRQAKVAV---VPSAAALVIK--ALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDG 530 LGL+ +GE + K E +KG+ V V + V + K + +P+ AL++K EP D K GN++L+ VI+IA + +P K L VK +LGT S+G TV+ KDP++L +E+ +G Sbjct: 28 LGLN---VGEVVKKLNEATSSFKGMSVPVTIEVDSNTKKYEIKVGIPTTTALLLKEAGASEPSGDPAHKKI----GNLSLEQVIKIAIMKKPGLTTKSLKAAVKSMLGTAKSIGVTVENKDPKELVKEVEEG 152
BLAST of CB304997 vs. ExPASy Swiss-Prot
Match: RL11_METST (50S ribosomal protein L11P OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rpl11p PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 9.909e-12 Identity = 40/133 (30.08%), Postives = 76/133 (57.14%), Query Frame = -1 Query: 147 GPLGLSPKKIGEDIAKETAKDWKGLRVTVKLT--VQNRQAKVAV-VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVE 536 GPLG++ ++ E+I K+TA D+ G++V VK+T + + ++++ P ALV+ L + + + +++ ++A++ +A D KE++GTCVS+G V GKD R+ Q++I +GD + Sbjct: 26 GPLGINMMQVVEEINKKTA-DFGGMKVPVKITADMDTKDFEISIGTPPTTALVLDELGIESGSHEPGTEVA--ADFSVEQAFKVARMKFDDLLANDYKHATKEVIGTCVSMGINVQGKDGRETQKDIDNGDYD 155
BLAST of CB304997 vs. ExPASy Swiss-Prot
Match: RL11_META3 (50S ribosomal protein L11P OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rpl11p PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 9.909e-12 Identity = 44/133 (33.08%), Postives = 78/133 (58.65%), Query Frame = -1 Query: 147 GPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQ--NRQAKVAV-VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDGDVE 536 GPLG++ + ++I ++T KD+ G+ V VK+ V +R ++ V +P +AL IK ++ + K I GN++++ ++IAK+ + ++ L KE++GTCVS G V+G PRD Q+ I G+ + Sbjct: 26 GPLGINIMNVVKEINEKT-KDYAGMSVPVKVIVNTDDRSFEIEVGIPPTSAL-IKTELGLDKGSTEPKAIVA-GNLSMEQAVKIAKMKKDSMLSFTLKNATKEVIGTCVSTGINVEGMSPRDAQKAIDAGEFD 155
BLAST of CB304997 vs. ExPASy Swiss-Prot
Match: RL11_SULSO (50S ribosomal protein L11P OS=Sulfolobus solfataricus GN=rpl11p PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.294e-11 Identity = 45/132 (34.09%), Postives = 72/132 (54.55%), Query Frame = -1 Query: 156 LGLSPKKIGEDIAK--ETAKDWKGLRVTVKLTVQNRQAKVAV---VPSAAALVIK--ALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDG 530 LGL+ +GE + K E +KG+ V V + V + K + +P+ AL++K EP D K GN++L+ VI+IA + +P K L +K +LGT S+G TVD +DP++L +E+ +G Sbjct: 28 LGLN---VGEVVKKLNEATSSFKGMSVPVTIEVDSSTKKYEIKVGIPTTTALLLKEAGASEPSGDPAHKKI----GNLSLEQVIKIAIMKKPGLTTKSLKAALKSMLGTAKSIGLTVDNRDPKELVKEVEEG 152
BLAST of CB304997 vs. ExPASy Swiss-Prot
Match: RL11_METAC (50S ribosomal protein L11P OS=Methanosarcina acetivorans GN=rpl11p PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.294e-11 Identity = 39/129 (30.23%), Postives = 78/129 (60.47%), Query Frame = -1 Query: 156 GPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQ-AKVAV-VPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDG 536 GPLG++ K++ E I ++T +D+ G++V VK+ V +++ ++ V P A+LV+K L + + GN+T+ V ++A++ + ++ DL +KE++G+CV +G V+G +D Q+ + +G Sbjct: 25 GPLGVNIKEVVEKINEKT-RDYNGMQVPVKVIVDDKKNVEIEVGTPPTASLVMKELGIQKGSGNAGSEVV--GNLTISQVAKVARMKKEDVLSYDLKAAMKEVMGSCVPMGVNVEGMKAKDCQKALDEG 150
BLAST of CB304997 vs. ExPASy Swiss-Prot
Match: RL11_SULIN (50S ribosomal protein L11P OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=rpl11p PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.690e-11 Identity = 45/132 (34.09%), Postives = 71/132 (53.79%), Query Frame = -1 Query: 156 LGLSPKKIGEDIAK--ETAKDWKGLRVTVKLTVQNRQAKVAV---VPSAAALVIK--ALKEPERDRKKTKNIKHNGNITLDDVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPRDLQQEITDG 530 LGL+ +GE + K E +KG+ V V + V + K + +P+ AL++K EP D K GN++L+ VI+I + +P K L VK +LGT S+G TV+ KDP++L +E+ +G Sbjct: 28 LGLN---VGEVVKKLNEATSSFKGMSVPVTIEVDSNTKKYEIKVGIPTTTALLLKEAGASEPSGDPAHKKI----GNLSLEQVIKIVIMKKPGLTTKSLKAAVKSMLGTAKSIGVTVENKDPKELVKEVEEG 152 The following BLAST results are available for this feature:
BLAST of CB304997 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 62
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304997 ID=CB304997; Name=CB304997; organism=Citrus sinensis; type=EST; length=539bpback to top |