CB305000
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB305000 vs. ExPASy Swiss-Prot
Match: MATK_BETVU (Maturase K OS=Beta vulgaris GN=matK PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 1.137e-43 Identity = 80/129 (62.02%), Postives = 103/129 (79.84%), Query Frame = -1 Query: 33 LMNKWKYYLVGLWQGHFPASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTAVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGS 419 LM+KWKYY++ WQ +F SQP ++ +N L ++++F+G+ S VRLNS ++RSQ+LENSFLI+N +KK DT VPII L+GSL KA+FCN LGHP+SKS W+D SDS +IDRF RICRNLSHYYSGS Sbjct: 293 LMHKWKYYIIYFWQCNFSVWSQPRKIYINRL--SNHSLDFMGFFSSVRLNSSVIRSQLLENSFLIENIIKKFDTIVPIIPLVGSLAKAKFCNVLGHPVSKSVWADLSDSDIIDRFGRICRNLSHYYSGS 419
BLAST of CB305000 vs. ExPASy Swiss-Prot
Match: MATK_AGOFL (Maturase K OS=Agonis flexuosa GN=matK PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 1.137e-43 Identity = 88/129 (68.22%), Postives = 100/129 (77.52%), Query Frame = -1 Query: 33 LMNKWKYYLVGLWQGHFPASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTAVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGS 419 LMNKWK YLV LWQ HF QPGR+ +N L KY+ +FLGY S VRLNS +VRSQMLEN FLI+N+MKK +T VPII LIGSL K+ FCN GHPISK T D SDS +IDRF+RICRNLSHY+SGS Sbjct: 291 LMNKWKCYLVNLWQYHFSVWFQPGRIDINQLC--KYSFDFLGYRSSVRLNSSVVRSQMLENLFLINNAMKKFETIVPIIPLIGSLYKSNFCNTFGHPISKPTRIDSSDSDIIDRFLRICRNLSHYHSGS 417
BLAST of CB305000 vs. ExPASy Swiss-Prot
Match: MATK_NICPL (Maturase K OS=Nicotiana plumbaginifolia GN=matK PE=3 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 1.485e-43 Identity = 85/129 (65.89%), Postives = 97/129 (75.19%), Query Frame = -1 Query: 33 LMNKWKYYLVGLWQGHFPASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTAVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGS 419 LMNKWK+YLV WQ HF GR+ +N L ++ +F+GYLS VRLN +VRSQMLENSFLI+N++KK DT VPII LIGSL KA FC LGHPISK WSD SDS +IDRF RICRNL HYYSGS Sbjct: 297 LMNKWKFYLVNFWQCHFSLCFHTGRIHINQL--SNHSRDFMGYLSSVRLNPSMVRSQMLENSFLINNAIKKFDTLVPIIPLIGSLAKANFCTVLGHPISKPVWSDLSDSDIIDRFGRICRNLFHYYSGS 423
BLAST of CB305000 vs. ExPASy Swiss-Prot
Match: MATK_NICAL (Maturase K OS=Nicotiana alata GN=matK PE=3 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 1.485e-43 Identity = 85/129 (65.89%), Postives = 97/129 (75.19%), Query Frame = -1 Query: 33 LMNKWKYYLVGLWQGHFPASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTAVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGS 419 LMNKWK+YLV WQ HF GR+ +N L ++ +F+GYLS VRLN +VRSQMLENSFLI+N++KK DT VPII LIGSL KA FC LGHPISK WSD SDS +IDRF RICRNL HYYSGS Sbjct: 297 LMNKWKFYLVNFWQCHFSLCFHTGRIHINQL--SNHSRDFMGYLSSVRLNPSMVRSQMLENSFLINNAIKKFDTLVPIIPLIGSLAKANFCTVLGHPISKPVWSDLSDSDIIDRFGRICRNLFHYYSGS 423
BLAST of CB305000 vs. ExPASy Swiss-Prot
Match: MATK_CHEBH (Maturase K OS=Chenopodium bonus-henricus GN=matK PE=3 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 1.485e-43 Identity = 83/129 (64.34%), Postives = 102/129 (79.07%), Query Frame = -1 Query: 33 LMNKWKYYLVGLWQGHFPASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTAVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGS 419 LM+KWKYYL+ Q HF SQP R+ +N L ++++F+G+LS VRLNS ++RSQMLENSFLI+N KK DT VPII L+GSL KA+FCN LGHPISKS W+D SDS ++DRF RICRN+SHYYSGS Sbjct: 293 LMHKWKYYLIYFGQCHFSVWSQPKRLYINRL--SNHSLDFMGFLSSVRLNSSVIRSQMLENSFLIENISKKFDTIVPIIPLVGSLAKAKFCNVLGHPISKSVWTDLSDSDILDRFGRICRNISHYYSGS 419
BLAST of CB305000 vs. ExPASy Swiss-Prot
Match: MATK_BERLA (Maturase K OS=Berzelia lanuginosa GN=matK PE=3 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 1.485e-43 Identity = 84/129 (65.12%), Postives = 101/129 (78.29%), Query Frame = -1 Query: 33 LMNKWKYYLVGLWQGHFPASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTAVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGS 419 LMNKWKYY V WQ +F S+PGRV +N L ++++ LGYLS VRLN +VRSQMLE +F+IDN+MKK D VPII LIGSL KA+FCN LGHPISK+ W+D SDS +IDRF RICR+LSHY+SGS Sbjct: 292 LMNKWKYYFVNFWQCYFYLWSKPGRVYINQL--SNHSLDLLGYLSSVRLNPSMVRSQMLEKAFIIDNAMKKFDAIVPIIPLIGSLAKAKFCNVLGHPISKAFWTDLSDSDIIDRFGRICRSLSHYHSGS 418
BLAST of CB305000 vs. ExPASy Swiss-Prot
Match: MATK_POPTR (Maturase K OS=Populus trichocarpa GN=matK PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 1.939e-43 Identity = 87/131 (66.41%), Postives = 100/131 (76.34%), Query Frame = -1 Query: 33 LMNKWKYYLVGLWQGHFPASSQPGRVQLNHLYLGKYAINFLGYLSG--VRLNSLLVRSQMLENSFLIDNSMKKVDTAVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGS 419 LM KWKYYLV L Q HF QP ++ +N L K++ LGYLS VRLN +VRSQMLEN+FL+DN M K+DT V II LIGSL K +FCNA+GHPISK TW+DFSDS +IDRFVRICRNLSHYYSGS Sbjct: 294 LMKKWKYYLVNLCQCHFDVCFQPQKIHINPFSLYKHSFALLGYLSSSSVRLNLSVVRSQMLENAFLMDNIMNKLDTTVSIIPLIGSLAKMKFCNAVGHPISKPTWADFSDSDIIDRFVRICRNLSHYYSGS 424
BLAST of CB305000 vs. ExPASy Swiss-Prot
Match: MATK_POPNI (Maturase K OS=Populus nigra GN=matK PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 1.939e-43 Identity = 87/131 (66.41%), Postives = 100/131 (76.34%), Query Frame = -1 Query: 33 LMNKWKYYLVGLWQGHFPASSQPGRVQLNHLYLGKYAINFLGYLSG--VRLNSLLVRSQMLENSFLIDNSMKKVDTAVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGS 419 LM KWKYYLV L Q HF QP ++ +N L K++ LGYLS VRLN +VRSQMLEN+FL+DN M K+DT V II LIGSL K +FCNA+GHPISK TW+DFSDS +IDRFVRICRNLSHYYSGS Sbjct: 294 LMKKWKYYLVNLCQCHFDVCFQPQKIHINPFSLYKHSFALLGYLSSSSVRLNLSVVRSQMLENAFLMDNIMNKLDTTVSIIPLIGSLAKMKFCNAVGHPISKPTWADFSDSDIIDRFVRICRNLSHYYSGS 424
BLAST of CB305000 vs. ExPASy Swiss-Prot
Match: MATK_POPAL (Maturase K OS=Populus alba GN=matK PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 1.939e-43 Identity = 87/131 (66.41%), Postives = 100/131 (76.34%), Query Frame = -1 Query: 33 LMNKWKYYLVGLWQGHFPASSQPGRVQLNHLYLGKYAINFLGYLSG--VRLNSLLVRSQMLENSFLIDNSMKKVDTAVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGS 419 LM KWKYYLV L Q HF QP ++ +N L K++ LGYLS VRLN +VRSQMLEN+FL+DN M K+DT V II LIGSL K +FCNA+GHPISK TW+DFSDS +IDRFVRICRNLSHYYSGS Sbjct: 294 LMKKWKYYLVNLCQCHFDVCFQPQKIHINPFSLYKHSFALLGYLSSSSVRLNLSVVRSQMLENAFLMDNIMNKLDTTVSIIPLIGSLAKMKFCNAVGHPISKPTWADFSDSDIIDRFVRICRNLSHYYSGS 424
BLAST of CB305000 vs. ExPASy Swiss-Prot
Match: MATK_MAMHA (Maturase K OS=Mammillaria haageana GN=matK PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 1.939e-43 Identity = 82/129 (63.57%), Postives = 100/129 (77.52%), Query Frame = -1 Query: 33 LMNKWKYYLVGLWQGHFPASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTAVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGS 419 LM+KWKYYL+ WQ HF SQP R+ +N L K++++F+G+ S VRLNS ++RSQM+ NSFLIDN +KK DT V II L+GSL KA+FCN LGHPISKS W+D DS +IDRF RICRNLSHYY GS Sbjct: 297 LMHKWKYYLLNFWQCHFSLWSQPRRIYINRL--SKHSLDFMGFFSSVRLNSSVIRSQMVANSFLIDNRIKKFDTIVRIIPLVGSLAKAKFCNVLGHPISKSVWTDLLDSDIIDRFGRICRNLSHYYGGS 423 The following BLAST results are available for this feature:
BLAST of CB305000 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB305000 ID=CB305000; Name=CB305000; organism=Citrus sinensis; type=EST; length=419bpback to top |