CB305000
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB305000 vs. ExPASy Swiss-Prot
Match: MATK_MEDSA (Maturase K OS=Medicago sativa GN=matK PE=3 SV=2) HSP 1 Score: 147.517 bits (371), Expect = 1.944e-35 Identity = 73/129 (56.59%), Postives = 91/129 (70.54%), Query Frame = -1 Query: 33 LMNKWKYYLVGLWQGHFPASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTAVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGS 419 LMNKWK+Y + LWQG F SQP + +N L +++ LGY VR+N +VRSQML+N+FLI+ KK+D VPII LI SL KA+FCN LG ISK W+D SD +IDRF+ ICRNLSHYY+GS Sbjct: 293 LMNKWKHYFIHLWQGFFYVWSQPRTIHINQL--SEHSFQLLGYFLNVRVNRSVVRSQMLQNTFLIEIFSKKLDIIVPIIPLIRSLAKAKFCNVLGPLISKPVWADSSDFDIIDRFLXICRNLSHYYNGS 419
BLAST of CB305000 vs. ExPASy Swiss-Prot
Match: MATK_HORVU (Maturase K OS=Hordeum vulgare GN=matK PE=2 SV=4) HSP 1 Score: 147.517 bits (371), Expect = 1.944e-35 Identity = 74/129 (57.36%), Postives = 88/129 (68.22%), Query Frame = -1 Query: 33 LMNKWKYYLVGLWQGHFPASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTAVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGS 419 L KWK YL+ WQ +F +QP R+ +N L +F+GYLS V + LLVR+QMLENSFLID MKK DT VP LIG L+KA+FC GHPISK W+D SD ++DRF RICRNL HYYSGS Sbjct: 297 LKKKWKCYLINFWQYYFFFWTQPRRIHINQL--ANSCFDFMGYLSSVPKSPLLVRNQMLENSFLIDTRMKKFDTIVPATLLIGYLSKAQFCTGSGHPISKPIWTDLSDWDILDRFGRICRNLFHYYSGS 423
BLAST of CB305000 vs. ExPASy Swiss-Prot
Match: MATK_ARIGL (Maturase K OS=Aristea glauca GN=matK PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 1.944e-35 Identity = 74/129 (57.36%), Postives = 90/129 (69.77%), Query Frame = -1 Query: 33 LMNKWKYYLVGLWQGHFPASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTAVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGS 419 LM KWKY+ V WQ +F Q R+ +N L + FLGYLS + S VR+QMLENSFLID + K DTAVP+I LIG+L+KA FC GHPISK W+D SDS++I+RF RICRNLSHY+SGS Sbjct: 309 LMKKWKYHFVNFWQYNFHFWYQSYRIHINQL--SNCSFYFLGYLSSLLKKSSTVRNQMLENSFLIDTIITKFDTAVPVIFLIGALSKAPFCTVSGHPISKPIWTDLSDSYIIERFGRICRNLSHYHSGS 435
BLAST of CB305000 vs. ExPASy Swiss-Prot
Match: MATK_ZINOF (Maturase K OS=Zingiber officinale GN=matK PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 2.539e-35 Identity = 72/129 (55.81%), Postives = 91/129 (70.54%), Query Frame = -1 Query: 33 LMNKWKYYLVGLWQGHFPASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTAVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGS 419 LM KWKY+LV WQ +F SQP R+ + L Y+ FLGY S V++NS +VR+QMLENSFL+D KK DT +PII LI SL KA+FC G+PISK W+D +D +I+RF RICR L+HY+SGS Sbjct: 298 LMKKWKYHLVNFWQYYFHFWSQPYRIDIKKL--SNYSFYFLGYFSSVQINSSMVRNQMLENSFLMDTLTKKFDTIIPIIPLIRSLFKAQFCTVSGYPISKPIWTDLADCDIINRFGRICRKLTHYHSGS 424
BLAST of CB305000 vs. ExPASy Swiss-Prot
Match: MATK_POAPR (Maturase K OS=Poa pratensis GN=matK PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 2.539e-35 Identity = 73/126 (57.94%), Postives = 88/126 (69.84%), Query Frame = -1 Query: 33 KWKYYLVGLWQGHFPASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTAVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGS 410 KWK+YL+ LWQ F +QP R+ LN L +F+GYLS V + LLVR+QMLENSFLID M K DT VP+ LIG L+KA+FC GHPISK W+D SD ++DRF RICRNL HY+SGS Sbjct: 300 KWKWYLIHLWQYFFSFWTQPRRIHLNQL--ANSCFDFMGYLSSVPKSPLLVRNQMLENSFLIDTRMPKFDTIVPVTALIGYLSKAQFCTGSGHPISKPIWTDLSDWDILDRFGRICRNLFHYHSGS 423
BLAST of CB305000 vs. ExPASy Swiss-Prot
Match: MATK_PARTT (Maturase K OS=Paris tetraphylla GN=matK PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 2.539e-35 Identity = 71/129 (55.04%), Postives = 91/129 (70.54%), Query Frame = -1 Query: 33 LMNKWKYYLVGLWQGHFPASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTAVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGS 419 L+ KWK YLV WQ + S+P R+ +N Y+ FLGY+S V +N V++QMLEN +L+D +K DT VP+I LIGSL+KA+FC LGHPISK W++ SDS +IDRF RICRNLSHY+SGS Sbjct: 301 LIKKWKCYLVNFWQYNLNFWSKPYRIHINPF--SNYSFYFLGYISSVLINPSAVKNQMLENFYLVDTLTQKFDTIVPVIPLIGSLSKAKFCTILGHPISKPIWAELSDSDIIDRFGRICRNLSHYHSGS 427
BLAST of CB305000 vs. ExPASy Swiss-Prot
Match: MATK_NARST (Maturase K OS=Nardus stricta GN=matK PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 2.539e-35 Identity = 76/129 (58.91%), Postives = 87/129 (67.44%), Query Frame = -1 Query: 33 LMNKWKYYLVGLWQGHFPASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTAVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGS 419 L KWK YLV WQ F QP R+QLN L +FLGYLS V + LLVR+QMLENSFLI +KK DT P I LIGSL+KA+FC GHPISK W+D SD ++DRF RICRNL HY+SGS Sbjct: 297 LRKKWKCYLVNFWQYSFSFWIQPRRIQLNKL--ANSCFDFLGYLSSVPQSPLLVRNQMLENSFLITTRIKKFDTIAPAISLIGSLSKAQFCTGSGHPISKPIWTDLSDWDILDRFGRICRNLFHYHSGS 423
BLAST of CB305000 vs. ExPASy Swiss-Prot
Match: MATK_LAPNE (Maturase K OS=Lapeirousia neglecta GN=matK PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 2.539e-35 Identity = 75/129 (58.14%), Postives = 90/129 (69.77%), Query Frame = -1 Query: 33 LMNKWKYYLVGLWQGHFPASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTAVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGS 419 LM KWKY V LWQ +F Q R+ +N L ++ FLGYLS + NS VR+QML+NSFLID K DTAVP+I LI SL+KA+FC GHPISK W+D SDS +I+RF RICRNLSHY+SGS Sbjct: 309 LMKKWKYNFVNLWQYYFHFWYQSYRIHINQL--SNHSFYFLGYLSSLLKNSSTVRNQMLDNSFLIDTLTTKFDTAVPVIFLIVSLSKAQFCTVSGHPISKPIWTDLSDSGIIERFGRICRNLSHYHSGS 435
BLAST of CB305000 vs. ExPASy Swiss-Prot
Match: MATK_FAGES (Maturase K OS=Fagopyrum esculentum GN=matK PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 2.539e-35 Identity = 74/129 (57.36%), Postives = 89/129 (68.99%), Query Frame = -1 Query: 33 LMNKWKYYLVGLWQGHFPASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTAVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGS 419 LM K+KYY V WQ HF Q R+ +N I+F+G+ VRLN +VRSQMLEN+FLI N +KK +T VP + LIGSL K +FCN LGHPISK W+D SDS +I RF R+CRNLSHYYSGS Sbjct: 294 LMTKFKYYFVNFWQCHFYLWLQTRRIYINKSL--NQPIDFIGFRLSVRLNPSVVRSQMLENAFLIYNGIKKFETLVPTMSLIGSLAKEKFCNVLGHPISKPAWADLSDSDIIRRFGRMCRNLSHYYSGS 420
BLAST of CB305000 vs. ExPASy Swiss-Prot
Match: MATK_FAGEA (Maturase K OS=Fagopyrum esculentum subsp. ancestrale GN=matK PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 2.539e-35 Identity = 74/129 (57.36%), Postives = 89/129 (68.99%), Query Frame = -1 Query: 33 LMNKWKYYLVGLWQGHFPASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTAVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGS 419 LM K+KYY V WQ HF Q R+ +N I+F+G+ VRLN +VRSQMLEN+FLI N +KK +T VP + LIGSL K +FCN LGHPISK W+D SDS +I RF R+CRNLSHYYSGS Sbjct: 294 LMTKFKYYFVNFWQCHFYLWLQTRRIYINKSL--NQPIDFIGFRLSVRLNPSVVRSQMLENAFLIYNGIKKFETLVPTMSLIGSLAKEKFCNVLGHPISKPAWADLSDSDIIRRFGRMCRNLSHYYSGS 420 The following BLAST results are available for this feature:
BLAST of CB305000 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB305000 ID=CB305000; Name=CB305000; organism=Citrus sinensis; type=EST; length=419bpback to top |