CB305000
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB305000 vs. ExPASy Swiss-Prot
Match: MATK_CARPA (Maturase K OS=Carica papaya GN=matK PE=3 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 7.121e-46 Identity = 89/129 (68.99%), Postives = 102/129 (79.07%), Query Frame = -1 Query: 33 LMNKWKYYLVGLWQGHFPASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTAVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGS 419 LMNKWKYY V LWQ HF SQ RV++ L K ++FLGY S +R N L+VRSQMLENSFLIDN++KK DT +PII +IGSL KARFCNALGHPISK W+D +DS +IDRFVRICRNLSHYYSGS Sbjct: 294 LMNKWKYYFVSLWQCHFYVWSQSRRVRIKQL--SKDYLDFLGYFSSLRFNPLVVRSQMLENSFLIDNAIKKFDTKIPIIPMIGSLAKARFCNALGHPISKPAWADSADSDIIDRFVRICRNLSHYYSGS 420
BLAST of CB305000 vs. ExPASy Swiss-Prot
Match: MATK_CALPE (Maturase K OS=Calyptranthes pallens GN=matK PE=3 SV=2) HSP 1 Score: 182.185 bits (461), Expect = 7.121e-46 Identity = 90/128 (70.31%), Postives = 105/128 (82.03%), Query Frame = -1 Query: 33 MNKWKYYLVGLWQGHFPASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTAVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGS 416 MNKWKYYLV LWQ HF A QPGR+ +N L Y+I+FLGY S VRLNS +VRSQMLENSF+I+N++KK +T VPII LIGSL+KA FCN LGHPISK T +D SDS +IDRF+RICRNLSHY+SGS Sbjct: 293 MNKWKYYLVNLWQYHFYAWFQPGRININQLC--NYSIDFLGYRSSVRLNSSVVRSQMLENSFIINNAIKKFETIVPIIPLIGSLSKANFCNTLGHPISKPTRADSSDSDIIDRFLRICRNLSHYHSGS 418
BLAST of CB305000 vs. ExPASy Swiss-Prot
Match: MATK_HYDMC (Maturase K OS=Hydrangea macrophylla GN=matK PE=3 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 9.300e-46 Identity = 88/129 (68.22%), Postives = 102/129 (79.07%), Query Frame = -1 Query: 33 LMNKWKYYLVGLWQGHFPASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTAVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGS 419 LMNKWKYYLV WQ HF SQP + +N L ++++FLGYLS VRLN +VRSQMLENS+LIDN++KK DT VPII LIGSL KA+FCN LGHPISK W+D SDS +IDRF RICRNLSHY+SGS Sbjct: 292 LMNKWKYYLVNCWQCHFYVWSQPRSIYINQL--SNHSLHFLGYLSSVRLNPSMVRSQMLENSYLIDNAIKKFDTIVPIIPLIGSLAKAKFCNVLGHPISKPVWADLSDSDIIDRFGRICRNLSHYHSGS 418
BLAST of CB305000 vs. ExPASy Swiss-Prot
Match: MATK_GOSSC (Maturase K OS=Gossypium schwendimanii GN=matK PE=3 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 9.300e-46 Identity = 88/129 (68.22%), Postives = 106/129 (82.17%), Query Frame = -1 Query: 33 LMNKWKYYLVGLWQGHFPASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTAVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGS 419 L+NKWKYY V LWQ +F SQ GRV++N L KY+++FLGYLS VRLN +VRSQMLENSFLIDN++K +DT +PII +IGSL+KA+FCN LGHPISK TW+D DS +IDRFVRI RNLSHY+SGS Sbjct: 290 LINKWKYYFVDLWQYYFYLWSQSGRVRINQL--SKYSLDFLGYLSSVRLNPSVVRSQMLENSFLIDNAVKTLDTRIPIISIIGSLSKAKFCNTLGHPISKPTWADSPDSDIIDRFVRISRNLSHYHSGS 416
BLAST of CB305000 vs. ExPASy Swiss-Prot
Match: MATK_GOSGO (Maturase K OS=Gossypium gossypioides GN=matK PE=3 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 9.300e-46 Identity = 88/129 (68.22%), Postives = 106/129 (82.17%), Query Frame = -1 Query: 33 LMNKWKYYLVGLWQGHFPASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTAVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGS 419 L+NKWKYY V LWQ +F SQ GRV++N L KY+++FLGYLS VRLN +VRSQMLENSFLIDN++K +DT +PII +IGSL+KA+FCN LGHPISK TW+D DS +IDRFVRI RNLSHY+SGS Sbjct: 290 LINKWKYYFVDLWQYYFYLWSQSGRVRINQL--SKYSLDFLGYLSSVRLNPSVVRSQMLENSFLIDNAVKTLDTRIPIISIIGSLSKAKFCNTLGHPISKPTWADSPDSDIIDRFVRISRNLSHYHSGS 416
BLAST of CB305000 vs. ExPASy Swiss-Prot
Match: MATK_ARUDI (Maturase K OS=Aruncus dioicus GN=matK PE=3 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 9.300e-46 Identity = 86/129 (66.67%), Postives = 105/129 (81.40%), Query Frame = -1 Query: 33 LMNKWKYYLVGLWQGHFPASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTAVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGS 419 +MNKWKYYLV LWQ H+ SQPGR+ +N L K+++ FLGY + ++ N +VRSQMLENSF++DN+MKK+DT VPII LI SL K +FCNALGHPISKSTW+D SD +IDRFVRICRN+SHYYSGS Sbjct: 292 MMNKWKYYLVNLWQCHYYVWSQPGRIYINQL--SKHSLYFLGYFASMQPNLSVVRSQMLENSFIMDNAMKKLDTLVPIIPLIVSLAKVKFCNALGHPISKSTWTDSSDFDIIDRFVRICRNISHYYSGS 418
BLAST of CB305000 vs. ExPASy Swiss-Prot
Match: MATK_PHASI (Maturase K OS=Phaulothamnus spinescens GN=matK PE=3 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 1.586e-45 Identity = 85/129 (65.89%), Postives = 103/129 (79.84%), Query Frame = -1 Query: 33 LMNKWKYYLVGLWQGHFPASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTAVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGS 419 LM+KWKYYL+ WQ HF SQP R+ +N L ++++F+G+ S VRLNS +VRSQMLENSFLIDN++ K DT +PII LIGSL KA+FCN LGHPISKS W+D SDS +IDRF RIC+NLSHYYSGS Sbjct: 293 LMHKWKYYLIHFWQCHFSVWSQPRRIYINRL--SNHSLDFMGFFSSVRLNSSVVRSQMLENSFLIDNTIMKFDTIIPIIPLIGSLAKAKFCNVLGHPISKSVWTDLSDSDIIDRFGRICKNLSHYYSGS 419
BLAST of CB305000 vs. ExPASy Swiss-Prot
Match: MATK_GOSBA (Maturase K OS=Gossypium barbadense GN=matK PE=3 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 1.586e-45 Identity = 88/129 (68.22%), Postives = 106/129 (82.17%), Query Frame = -1 Query: 33 LMNKWKYYLVGLWQGHFPASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTAVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGS 419 L+NKWKYY V LWQ +F SQ GRV++N L KY+++FLGYLS VRLN +VRSQ+LENSFLIDN++K +DT +PII LIGSL+KA+FCN LGHPISK TW+D DS +IDRFVRI RNLSHY+SGS Sbjct: 290 LINKWKYYFVDLWQYYFYLWSQSGRVRINQL--SKYSLDFLGYLSSVRLNPSVVRSQVLENSFLIDNAVKTLDTRIPIISLIGSLSKAKFCNTLGHPISKPTWADSPDSDIIDRFVRISRNLSHYHSGS 416
BLAST of CB305000 vs. ExPASy Swiss-Prot
Match: MATK_DIOVR (Maturase K OS=Diospyros virginiana GN=matK PE=3 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 1.586e-45 Identity = 89/129 (68.99%), Postives = 102/129 (79.07%), Query Frame = -1 Query: 33 LMNKWKYYLVGLWQGHFPASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTAVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGS 419 LMNKWKYYLV WQ +F SQPGR+ NHL ++++FLGYLS VRLN +VRSQMLENSFLI N++KK D VPII L+GSL+KA+FCN LGHPISK WSD SDS +IDRF RI RNLSHYYSGS Sbjct: 292 LMNKWKYYLVNFWQCYFYMWSQPGRIHRNHL--SNHSLDFLGYLSSVRLNPSIVRSQMLENSFLIGNAIKKYDPIVPIIPLMGSLSKAKFCNVLGHPISKPVWSDLSDSDIIDRFGRIYRNLSHYYSGS 418
BLAST of CB305000 vs. ExPASy Swiss-Prot
Match: MATK_THRSA (Maturase K OS=Thryptomene saxicola GN=matK PE=3 SV=2) HSP 1 Score: 180.644 bits (457), Expect = 2.072e-45 Identity = 88/128 (68.75%), Postives = 104/128 (81.25%), Query Frame = -1 Query: 33 MNKWKYYLVGLWQGHFPASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTAVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGS 416 MNKWKYYLV LWQ HF A +PGR+ +N L+ KY+++FLGY S VRLNS +VRSQML+N FLI+N+MKK +T VPII LIGSL KA FCN GHPISK T +D SDS +IDRF+RICRNLSHY+SGS Sbjct: 292 MNKWKYYLVNLWQYHFYAWFKPGRIDINQLF--KYSLDFLGYRSNVRLNSSVVRSQMLZNLFLINNAMKKFETIVPIIPLIGSLYKANFCNTFGHPISKPTRTDSSDSDIIDRFLRICRNLSHYHSGS 417 The following BLAST results are available for this feature:
BLAST of CB305000 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CB305000 ID=CB305000; Name=CB305000; organism=Citrus sinensis; type=EST; length=419bpback to top |