CB305000
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB305000 vs. ExPASy Swiss-Prot
Match: MATK_RUBUR (Maturase K OS=Rubus ursinus GN=matK PE=3 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 2.706e-45 Identity = 87/129 (67.44%), Postives = 104/129 (80.62%), Query Frame = -1 Query: 33 LMNKWKYYLVGLWQGHFPASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTAVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGS 419 LMNKWKYYLV WQ +F SQPGR+ +N L K++++FLGYLS +R N +VRSQ+LENSFL+DN+MKK+DT VPII +IGSL K +FCN LGHPISKSTW+D SDS +IDRFVRI NL HYYSGS Sbjct: 291 LMNKWKYYLVNFWQCNFYVWSQPGRIHINQL--SKHSLDFLGYLSSIRPNISVVRSQLLENSFLMDNAMKKLDTLVPIIPMIGSLAKVKFCNTLGHPISKSTWADSSDSDIIDRFVRIGGNLFHYYSGS 417
BLAST of CB305000 vs. ExPASy Swiss-Prot
Match: MATK_FICCA (Maturase K OS=Ficus carica GN=matK PE=3 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 2.706e-45 Identity = 86/128 (67.19%), Postives = 103/128 (80.47%), Query Frame = -1 Query: 33 MNKWKYYLVGLWQGHFPASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTAVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGS 416 MNKW+YYLV LWQ HF SQPGR+ +N L K++++FLGYLS +++N +VRSQMLENSFL+DN+MKK+DT VPI LIGSL K RFCN LGHP+SKSTW+D SD +IDRF ICRNL HYYSGS Sbjct: 294 MNKWRYYLVLLWQCHFSVWSQPGRMYINQLC--KHSLSFLGYLSNMQINLSVVRSQMLENSFLMDNAMKKIDTLVPISPLIGSLAKMRFCNVLGHPVSKSTWADSSDFDIIDRFAYICRNLFHYYSGS 419
BLAST of CB305000 vs. ExPASy Swiss-Prot
Match: MATK_ADEFA (Maturase K OS=Adenostoma fasciculatum GN=matK PE=3 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 2.706e-45 Identity = 89/129 (68.99%), Postives = 101/129 (78.29%), Query Frame = -1 Query: 33 LMNKWKYYLVGLWQGHFPASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTAVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGS 419 LMNKWKYYLV LWQ H SQPGR+ +N L K++I FLGY S +R N +VRSQMLENSF++DN+MKK DT VPII LI SL K +FCN LGHPISKS W+D SD +IDRFVRICRNLSHYYSGS Sbjct: 292 LMNKWKYYLVNLWQCHSYVWSQPGRICINQL--SKHSIYFLGYFSSMRPNLSVVRSQMLENSFIMDNAMKKFDTLVPIIPLIRSLAKVKFCNTLGHPISKSAWADSSDFDIIDRFVRICRNLSHYYSGS 418
BLAST of CB305000 vs. ExPASy Swiss-Prot
Match: MATK_STEPS (Maturase K OS=Stewartia pseudocamellia GN=matK PE=3 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 3.534e-45 Identity = 87/129 (67.44%), Postives = 104/129 (80.62%), Query Frame = -1 Query: 33 LMNKWKYYLVGLWQGHFPASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTAVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGS 419 LMNKW+YYLV WQ +F SQPGR+ +N L K++++FLGYLS VRLN +VRSQMLENSFLI N++KK DT VPII +IGSL+KA+FCN LGHPISK W+D SDS +IDRF RI RNLSHY+SGS Sbjct: 296 LMNKWRYYLVNFWQCYFYIWSQPGRIHINQL--SKHSLDFLGYLSSVRLNPSMVRSQMLENSFLIGNAIKKFDTIVPIIPMIGSLSKAKFCNVLGHPISKPVWADLSDSDIIDRFGRIYRNLSHYHSGS 422
BLAST of CB305000 vs. ExPASy Swiss-Prot
Match: MATK_PELHO (Maturase K OS=Pelargonium hortorum GN=matK PE=3 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 3.534e-45 Identity = 85/129 (65.89%), Postives = 104/129 (80.62%), Query Frame = -1 Query: 33 LMNKWKYYLVGLWQGHFPASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTAVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGS 419 LMNKWKYYLV LWQ HF SQPGR+ +N L +++++ LGYL V N L+VRSQ+ +NSFLIDN+M K++T +P+ LIGSLTKA+FCN LG PISKSTW+D SDS +IDRFVR+CRNLSHYYSGS Sbjct: 296 LMNKWKYYLVKLWQCHFYVWSQPGRIHINQL--SQHSLHLLGYLLSVGTNPLVVRSQVFDNSFLIDNAMNKLETRIPLFSLIGSLTKAQFCNPLGQPISKSTWADSSDSDIIDRFVRMCRNLSHYYSGS 422
BLAST of CB305000 vs. ExPASy Swiss-Prot
Match: MATK_MENLA (Maturase K OS=Mentzelia laevicaulis GN=matK PE=3 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 4.616e-45 Identity = 86/129 (66.67%), Postives = 102/129 (79.07%), Query Frame = -1 Query: 33 LMNKWKYYLVGLWQGHFPASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTAVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGS 419 LMNKWKYYL+ WQ HF SQP R+ +N L ++++FLGYLS VRLN +VRSQM+ENSFLIDN++KK DT VPII +I SL KA+FCN LGHPISK W+D SDS +IDRF RICRNLSHY+SGS Sbjct: 290 LMNKWKYYLLNCWQCHFYVWSQPRRIYINQL--SNHSLDFLGYLSSVRLNPSMVRSQMIENSFLIDNAIKKFDTIVPIIPMIQSLAKAKFCNVLGHPISKPVWADLSDSDIIDRFGRICRNLSHYHSGS 416
BLAST of CB305000 vs. ExPASy Swiss-Prot
Match: MATK_FAGJA (Maturase K OS=Fagus japonica GN=matK PE=3 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 4.616e-45 Identity = 88/129 (68.22%), Postives = 103/129 (79.84%), Query Frame = -1 Query: 33 LMNKWKYYLVGLWQGHFPASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTAVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGS 419 LMNKWKYYLV LWQ HF S PGR+ +N L K++++F GY S VRLN +VRSQMLENSFLI+N+ KK+D VPII LIGSL KARFCNALGHPISK T +D SD +++RF+RICRNLSHYYSGS Sbjct: 292 LMNKWKYYLVNLWQCHFYVWSHPGRIHINQL--SKHSLDFWGYFSSVRLNPSVVRSQMLENSFLINNAPKKLDIIVPIIPLIGSLAKARFCNALGHPISKLTRADLSDFEILNRFLRICRNLSHYYSGS 418
BLAST of CB305000 vs. ExPASy Swiss-Prot
Match: MATK_FAGCR (Maturase K OS=Fagus crenata GN=matK PE=3 SV=2) HSP 1 Score: 179.489 bits (454), Expect = 4.616e-45 Identity = 88/129 (68.22%), Postives = 103/129 (79.84%), Query Frame = -1 Query: 33 LMNKWKYYLVGLWQGHFPASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTAVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGS 419 LMNKWKYYLV LWQ HF S PGR+ +N L K++++F GY S VRLN +VRSQMLENSFLI+N+ KK+D VPII LIGSL KARFCNALGHPISK T +D SD +++RF+RICRNLSHYYSGS Sbjct: 292 LMNKWKYYLVNLWQCHFYVWSHPGRIHINQL--SKHSLDFWGYFSSVRLNPSVVRSQMLENSFLINNAPKKLDIIVPIIPLIGSLAKARFCNALGHPISKLTRADLSDFEILNRFLRICRNLSHYYSGS 418
BLAST of CB305000 vs. ExPASy Swiss-Prot
Match: MATK_AMAGR (Maturase K OS=Amaranthus greggii GN=matK PE=3 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 4.616e-45 Identity = 83/129 (64.34%), Postives = 101/129 (78.29%), Query Frame = -1 Query: 33 LMNKWKYYLVGLWQGHFPASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTAVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGS 419 LM KWKYY + WQ HF SQP R+ +N L Y+++F+G++S V LNS ++RSQMLENSFL+DN +KK DT VPII L+GSL KA+FCN LGHPISKS W+D SD+ +IDRF RICRNLSHYYSGS Sbjct: 293 LMYKWKYYFIAFWQCHFSVWSQPRRIYINQL--SNYSLDFMGFISNVGLNSSVIRSQMLENSFLVDNIIKKFDTIVPIIPLVGSLAKAKFCNGLGHPISKSVWTDLSDADIIDRFGRICRNLSHYYSGS 419
BLAST of CB305000 vs. ExPASy Swiss-Prot
Match: MATK_RHACA (Maturase K OS=Rhamnus cathartica GN=matK PE=3 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 6.028e-45 Identity = 86/129 (66.67%), Postives = 103/129 (79.84%), Query Frame = -1 Query: 33 LMNKWKYYLVGLWQGHFPASSQPGRVQLNHLYLGKYAINFLGYLSGVRLNSLLVRSQMLENSFLIDNSMKKVDTAVPIIHLIGSLTKARFCNALGHPISKSTWSDFSDSHLIDRFVRICRNLSHYYSGS 419 LMNKWKYYLV LWQ HF +QPGR+ +N L+ K++ FLGYLS VR N LVRSQ LENSF++DN++KK+DT PI LIGSL K +FC+ALGHP+SKSTW+D SD +I+RF RICRNLSHYYSGS Sbjct: 291 LMNKWKYYLVHLWQWHFYVWAQPGRIYINLLF--KHSFGFLGYLSSVRQNLSLVRSQTLENSFIMDNAIKKLDTLAPISPLIGSLAKMQFCSALGHPVSKSTWTDSSDFSIINRFARICRNLSHYYSGS 417 The following BLAST results are available for this feature:
BLAST of CB305000 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB305000 ID=CB305000; Name=CB305000; organism=Citrus sinensis; type=EST; length=419bpback to top |