CB305001
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB305001 vs. ExPASy Swiss-Prot
Match: TPIS_STRT1 (Triosephosphate isomerase OS=Streptococcus thermophilus (strain CNRZ 1066) GN=tpiA PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 7.193e-19 Identity = 53/118 (44.92%), Postives = 69/118 (58.47%), Query Frame = -3 Query: 296 IACVGETLEQRESGSTVAVVAEQTKAIAEKISNWD--NVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 643 I C GE+LE E+G V Q A ++ + V+AYEP+WAIGTGK A+ AQ++ +R + + EVA R++YGGSV N E A PDVDG LVGGASL+PE Sbjct: 125 IICCGESLETYEAGKAAEFVGAQVSAALAGLTPEQVASSVIAYEPIWAIGTGKSASQDDAQKMCKVVRDVVAADFGQEVADKVRVLYGGSVKPENVAEYMACPDVDGALVGGASLEPE 242
BLAST of CB305001 vs. ExPASy Swiss-Prot
Match: TPIS_AGRT5 (Triosephosphate isomerase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=tpiA PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 7.193e-19 Identity = 49/114 (42.98%), Postives = 67/114 (58.77%), Query Frame = -3 Query: 302 IACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 643 I C+GET ++R++G T+ ++ Q + +N V+AYEPVWAIGTG T +E HA +R L + + RI+YGGSV AN EL +VDG L+GGASLK Sbjct: 128 IVCIGETADERKAGQTLDILKRQLAGSLPDEATAENTVIAYEPVWAIGTGLTPTTQDVREAHAFMRDELVKRF-GDAGKTMRILYGGSVKPANALELMGVENVDGALIGGASLK 240
BLAST of CB305001 vs. ExPASy Swiss-Prot
Match: TPIS_STRP8 (Triosephosphate isomerase OS=Streptococcus pyogenes serotype M18 GN=tpiA PE=3 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 9.394e-19 Identity = 54/118 (45.76%), Postives = 68/118 (57.63%), Query Frame = -3 Query: 296 IACVGETLEQRESGSTVAVVAEQTKAIAEKISNWD--NVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 643 I C GE+LE E+G V Q A +S ++VLAYEP+WAIGTGK AT AQ + +R + + EVA R+ YGGSV N K+ A PDVDG LVGGASL+ + Sbjct: 125 IICCGESLETYEAGKAAEFVGAQVSAALAGLSAEQVASLVLAYEPIWAIGTGKSATQDDAQNMCKAVRDVVAADFGQEVADKVRVQYGGSVKPENVKDYMACPDVDGALVGGASLEAD 242
BLAST of CB305001 vs. ExPASy Swiss-Prot
Match: TPIS_ONYPE (Triosephosphate isomerase OS=Onion yellows phytoplasma GN=tpiA PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 9.394e-19 Identity = 50/116 (43.10%), Postives = 71/116 (61.21%), Query Frame = -3 Query: 296 CVGETLEQRESGSTVAVVAEQTKAIAEKISN--WDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 637 CVGE+L +E+ T + +Q I + N+++AYEPVWAIGTGK ATP A +V ++R + S++ + + RIIYGGSV+ AN K + QP +DG L G ASL+ E Sbjct: 129 CVGESLLTKENNQTQVFLDQQLTNIFAGVPEEALQNIIIAYEPVWAIGTGKSATPQDANKVIEQIRDKVTALYSSQASCAMRIIYGGSVSVANIKTILEQPAIDGILAGKASLQTE 244
BLAST of CB305001 vs. ExPASy Swiss-Prot
Match: TPIS_SYNS9 (Triosephosphate isomerase OS=Synechococcus sp. (strain CC9902) GN=tpiA PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.227e-18 Identity = 52/116 (44.83%), Postives = 66/116 (56.90%), Query Frame = -3 Query: 296 IACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 643 I CVGET EQRE G V+ Q + E + D +V+AYEP+WAIGTGK A+A + +R W+ + I YGGSV G N EL D+DG LVGGASL+P+ Sbjct: 125 IVCVGETDEQRERGEAERVIRRQIEQGLEGLDA-DLLVVAYEPIWAIGTGKTCEAAEANRICGLIRSWVG-------SPDLVIQYGGSVKGGNIDELMGMSDIDGVLVGGASLQPD 232
BLAST of CB305001 vs. ExPASy Swiss-Prot
Match: TPIS_PHYAS (Triosephosphate isomerase OS=Phytoplasma australiense GN=tpiA PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.227e-18 Identity = 46/116 (39.66%), Postives = 74/116 (63.79%), Query Frame = -3 Query: 302 IACVGETLEQRESGSTVAVVAEQTKAIAEKISNWD--NVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 643 + C+GETLE +E+ T + +Q + + D +++AYEPVWAIGTGK A+P +A + ++R+ + + SA+V S +I+YGGSV+ N + + Q ++DG LVG ASL+ Sbjct: 127 VLCLGETLETKENNKTKEFLEKQLTQALKDVPQEDLEKILIAYEPVWAIGTGKTASPQEANQTIKQIREKVTNLYSAQVVQSLKILYGGSVSSNNVEAILEQNEIDGVLVGKASLE 242
BLAST of CB305001 vs. ExPASy Swiss-Prot
Match: TPIS_OLICO (Triosephosphate isomerase OS=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) GN=tpiA PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.227e-18 Identity = 50/114 (43.86%), Postives = 67/114 (58.77%), Query Frame = -3 Query: 302 IACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 643 I CVGET +R++G VV Q + N+V+AYEPVWAIGTG T +E+HA +R+ L AE R++YGGS+ AN E+ A +V+G L+GGASLK Sbjct: 127 IVCVGETRAERDAGRAAEVVGRQLDGSVPDGARAANLVVAYEPVWAIGTGLTPTSQDIEEIHAVIRQNLTGRFKAE-GEGVRLLYGGSLKPANAAEILALANVNGGLIGGASLK 239
BLAST of CB305001 vs. ExPASy Swiss-Prot
Match: TPIS_MYCPU (Triosephosphate isomerase OS=Mycoplasma pulmonis GN=tpiA PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.227e-18 Identity = 53/114 (46.49%), Postives = 75/114 (65.79%), Query Frame = -3 Query: 302 IACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 643 I CVGE+LE+ E+G T AV+ +Q K E + + +V+AYEP+WAIGTGKVAT AQ++ K+++ S ++ I YGGSV+ +N + L Q D+DG LVGGASL+ Sbjct: 130 IICVGESLEEYEAGKTKAVIKKQIKQSLEAL-DLSKIVVAYEPIWAIGTGKVATAEVAQQI----CKFIRSITSKDLI----IQYGGSVSPSNIENLMKQEDIDGALVGGASLE 234
BLAST of CB305001 vs. ExPASy Swiss-Prot
Match: TPIS_MYCPE (Triosephosphate isomerase OS=Mycoplasma penetrans GN=tpiA PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.227e-18 Identity = 51/118 (43.22%), Postives = 69/118 (58.47%), Query Frame = -3 Query: 296 IACVGETLEQRESGSTVAVVAEQTKAIAEKISNWD--NVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 643 + CVGETLE+ E+ + VV QTK +S NVV+AYEPVWAIGTGKV T + ++ ++R L S + S ++YGGSVN N +E Q +++G LVG LK E Sbjct: 122 VVCVGETLEEYEANKSFDVVWNQTKKALANVSEAQLKNVVIAYEPVWAIGTGKVPTGKEVDDLIQKVRDELSKLYSKQAVESLVVLYGGSVNDKNAEEFFKQKNINGALVGSFCLKAE 239
BLAST of CB305001 vs. ExPASy Swiss-Prot
Match: TPIS1_RHIEC (Triosephosphate isomerase 1 OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=tpiA PE=3 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 1.227e-18 Identity = 48/114 (42.11%), Postives = 65/114 (57.02%), Query Frame = -3 Query: 302 IACVGETLEQRESGSTVAVVAEQTKAIAEKISNWDNVVLAYEPVWAIGTGKVATPAQAQEVHAELRKWLKDNVSAEVAASTRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 643 I C+GET ++R +G + V+ Q A + +N V+AYEP+WAIGTG T ++ HA +R L E R++YGGSV AN EL +VDG L+GGASLK Sbjct: 128 IICIGETADERRAGQELDVIKRQLSASVPDAATAENTVIAYEPIWAIGTGVTPTSGDVEKAHAFMRAELVSRFGDE-GRKMRLLYGGSVKPANAGELLGIANVDGALIGGASLK 240 The following BLAST results are available for this feature:
BLAST of CB305001 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB305001 ID=CB305001; Name=CB305001; organism=Citrus sinensis; type=EST; length=645bpback to top |