CB305027
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB305027 vs. ExPASy Swiss-Prot
Match: NLTP3_HORVU (Non-specific lipid-transfer protein 3 OS=Hordeum vulgare GN=LTP3 PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.716e-25 Identity = 53/113 (46.90%), Postives = 76/113 (67.26%), Query Frame = -2 Query: 251 AALKLVCALRLCILVTAPVTNAITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLPRQCGVSIPYKISPNTDCSRV 589 AA +LV + ++ AI+CGQV+ +L+PCI++ R G PP CC+GV+ L GAA++T D+QAAC CLK SI GIN +G+P +CGVS+P+ IS +TDC++V Sbjct: 5 AATQLVLVAMVAAMLLVATDAAISCGQVSSALSPCISYARGNGAKPPVACCSGVKRLAGAAQSTADKQAACRCLKSLATSIKGINMGKVSGVPGKCGVSVPFPISMSTDCNKV 117
BLAST of CB305027 vs. ExPASy Swiss-Prot
Match: NLT43_HORVU (Non-specific lipid-transfer protein 4.3 OS=Hordeum vulgare GN=LTP4.3 PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.716e-25 Identity = 54/114 (47.37%), Postives = 76/114 (66.67%), Query Frame = -2 Query: 248 AALKLVCALRLCILVTAPVTNAITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLPRQCGVSIPYKISPNTDCSRVR 589 AA +LV + ++ AI+CGQV+ +L+PCI++ R G PP CC+GV+ L GAA++T D+QAAC C+K A G+NA AAG+P CGVS+PY IS + DCS++R Sbjct: 5 AATQLVLVAMVAAMLLVATDAAISCGQVSSALSPCISYARGNGAKPPVACCSGVKRLAGAAQSTADKQAACKCIKSA---AGGLNAGKAAGIPSMCGVSVPYAISASVDCSKIR 115
BLAST of CB305027 vs. ExPASy Swiss-Prot
Match: NLT42_HORVU (Non-specific lipid-transfer protein 4.2 OS=Hordeum vulgare GN=LTP4.2 PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.716e-25 Identity = 54/114 (47.37%), Postives = 76/114 (66.67%), Query Frame = -2 Query: 248 AALKLVCALRLCILVTAPVTNAITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLPRQCGVSIPYKISPNTDCSRVR 589 AA +LV + ++ AI+CGQV+ +L+PCI++ R G PP CC+GV+ L GAA++T D+QAAC C+K A G+NA AAG+P CGVS+PY IS + DCS++R Sbjct: 5 AATQLVLVAMVAAMLIVATDAAISCGQVSSALSPCISYARGNGAKPPVACCSGVKRLAGAAQSTADKQAACKCIKSA---AGGLNAGKAAGIPSMCGVSVPYAISASVDCSKIR 115
BLAST of CB305027 vs. ExPASy Swiss-Prot
Match: NLT41_HORVU (Non-specific lipid-transfer protein 4.1 OS=Hordeum vulgare GN=LTP4.1 PE=1 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.241e-25 Identity = 54/114 (47.37%), Postives = 76/114 (66.67%), Query Frame = -2 Query: 248 AALKLVCALRLCILVTAPVTNAITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLPRQCGVSIPYKISPNTDCSRVR 589 AA +LV + ++ AI+CGQV+ +L+PCI++ R G PP CC+GV+ L GAA++T D+QAAC C+K A G+NA AAG+P CGVS+PY IS + DCS++R Sbjct: 5 AASQLVLVALVAAMLLVAADAAISCGQVSSALSPCISYARGNGAKPPAACCSGVKRLAGAAQSTADKQAACKCIKSA---AGGLNAGKAAGIPSMCGVSVPYAISASVDCSKIR 115
BLAST of CB305027 vs. ExPASy Swiss-Prot
Match: NLTP2_ARATH (Non-specific lipid-transfer protein 2 OS=Arabidopsis thaliana GN=LTP2 PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.897e-24 Identity = 58/119 (48.74%), Postives = 78/119 (65.55%), Query Frame = -2 Query: 248 LMAALKLVCALRLCILVTAPVT-NAI-TCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSI-PGINANVAAGLPRQCGVSIPYKISPNTDCSRVR 595 + +KL C + C++V P+T NA+ +CG V G+LA CIA+L G CCNGV +L A TTPDRQ AC CL+ A +++ PG+N AAGLP C V+IPYKIS +T+C+ VR Sbjct: 1 MAGVMKLACMVLACMIVAGPITANALMSCGTVNGNLAGCIAYLTRGAPLTQG-CCNGVTNLKNMASTTPDRQQACRCLQSAAKAVGPGLNTARAAGLPSACKVNIPYKISASTNCNTVR 118
BLAST of CB305027 vs. ExPASy Swiss-Prot
Match: NLTP7_ARATH (Non-specific lipid-transfer protein 7 OS=Arabidopsis thaliana GN=LTP7 PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.606e-23 Identity = 54/115 (46.96%), Postives = 76/115 (66.09%), Query Frame = -2 Query: 257 LKLVCALRLCILVTAPVTN--AITCGQVTGSLAPCIAFLRTGG-RFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSI-PGINANVAAGLPRQCGVSIPY--KISPNTDCS 583 +KL C + + ++ P+T A++CG+V +L PC +L GG P P CCNGVR LNG TT DR+ AC C+K A R++ PG+NA+ AAG+PR+CG+ IPY +I NT C+ Sbjct: 5 MKLGCLVFVFVIAAGPITAKAALSCGEVNSNLKPCTGYLTNGGITSPGPQCCNGVRKLNGMVLTTLDRRQACRCIKNAARNVGPGLNADRAAGIPRRCGIKIPYSTQIRFNTKCN 119
BLAST of CB305027 vs. ExPASy Swiss-Prot
Match: NLTP5_VITSX (Non-specific lipid-transfer protein P5 OS=Vitis sp. PE=1 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.606e-23 Identity = 50/91 (54.95%), Postives = 66/91 (72.53%), Query Frame = -2 Query: 251 ITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLPRQCGVSIPYKISPNTDCSRV 523 ++CG V LAPCI +LR+ G P CCNGV++L +A TT DR+ AC CL A +SI G+N +AAGLP +CGV+IPYKISP+T+C +V Sbjct: 1 LSCGDVATQLAPCINYLRSAGPLPVA-CCNGVKNLKNSAATTQDRRTACKCLINASKSISGVNFGLAAGLPGKCGVNIPYKISPSTNCDQV 90
BLAST of CB305027 vs. ExPASy Swiss-Prot
Match: NLTP_ELECO (Non-specific lipid-transfer protein OS=Eleusine coracana PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 3.577e-23 Identity = 51/93 (54.84%), Postives = 66/93 (70.97%), Query Frame = -2 Query: 251 AITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNC-LKQAYRSIPGINANVAAGLPRQCGVSIPYKISPNTDCSRV 526 AI+CGQV+ ++ PC+A+ R G P C +GVRSLN AARTT DR+AACNC LK A + G+NA A+ +P +CGV +PY IS + DCSRV Sbjct: 1 AISCGQVSSAIGPCLAYARGAGAAPSASCQSGVRSLNAAARTTADRRAACNCSLKSAASRVSGLNAGKASSIPGRCGVRLPYAISASIDCSRV 93
BLAST of CB305027 vs. ExPASy Swiss-Prot
Match: NLTP1_PHAAU (Non-specific lipid-transfer protein 1 OS=Phaseolus aureus PE=1 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 6.102e-23 Identity = 49/91 (53.85%), Postives = 67/91 (73.63%), Query Frame = -2 Query: 251 ITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLPRQCGVSIPYKISPNTDCSRV 523 +TCGQV G+LA CI FL+ GG PP CC GV+++ ++RTT DR+A C+CLK A ++ GIN N A LP +CGV+IPYKIS +T+C+ + Sbjct: 1 MTCGQVQGNLAQCIGFLQKGG-VVPPSCCTGVKNILNSSRTTADRRAVCSCLKAAAGAVRGINPNNAEALPGKCGVNIPYKISTSTNCNSI 90
BLAST of CB305027 vs. ExPASy Swiss-Prot
Match: NLTP3_VITSX (Non-specific lipid-transfer protein P3 OS=Vitis sp. PE=1 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 3.028e-22 Identity = 48/91 (52.75%), Postives = 64/91 (70.33%), Query Frame = -2 Query: 251 ITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLPRQCGVSIPYKISPNTDCSRV 523 ++CG V +A CI +LR G P CCNGV++L +A TT DR+ AC CL A ++I G+N +AAGLP +CGVSIPYKISP+T+C +V Sbjct: 1 LSCGDVATQMASCINYLRGAGPLPAA-CCNGVKNLKNSATTTQDRRTACKCLISASKTISGVNFGLAAGLPAKCGVSIPYKISPSTNCDQV 90 The following BLAST results are available for this feature:
BLAST of CB305027 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 81
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Sequences
The
following sequences are available for this feature:
EST sequence >CB305027 ID=CB305027; Name=CB305027; organism=Citrus sinensis; type=EST; length=635bpback to top |