CB305027
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB305027 vs. ExPASy Swiss-Prot
Match: NLTP8_HORVU (Non-specific lipid-transfer protein Cw18 OS=Hordeum vulgare GN=CW18 PE=1 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 3.955e-22 Identity = 52/114 (45.61%), Postives = 70/114 (61.40%), Query Frame = -2 Query: 251 AALKLVCALRLCILVTAPVTNAITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPG-INANVAAGLPRQCGVSIPYKISPNTDCSRV 589 AA KL + ++ AITCGQV+ +L PC A+ + G P CC+GV+ L G AR+T D+QA C CLK S+ G NA AAG+P +CGVS+PY IS + DCS++ Sbjct: 5 AATKLALVALVAAMLLVAADAAITCGQVSSALGPCAAYAKGSGTSPSAGCCSGVKRLAGLARSTADKQATCRCLK----SVAGAYNAGRAAGIPSRCGVSVPYTISASVDCSKI 114
BLAST of CB305027 vs. ExPASy Swiss-Prot
Match: NLTP1_HORVU (Non-specific lipid-transfer protein 1 OS=Hordeum vulgare GN=LTP1 PE=1 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 6.746e-22 Identity = 50/114 (43.86%), Postives = 71/114 (62.28%), Query Frame = -2 Query: 251 AALKLVCALRLCILVTAP-VTNAITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLPRQCGVSIPYKISPNTDCSRV 589 A + L+ A + +L AP A+ CGQV + PC+ +++ GG P CCNGVR L+ A+++ DRQ CNCLK R I +N N AA +P +C V++PY ISP+ DCSR+ Sbjct: 4 AQVLLMAAALVLMLTAAPRAAVALNCGQVDSKMKPCLTYVQ-GGPGPSGECCNGVRDLHNQAQSSGDRQTVCNCLKGIARGIHNLNLNNAASIPSKCNVNVPYTISPDIDCSRI 116
BLAST of CB305027 vs. ExPASy Swiss-Prot
Match: NLTPC_ARATH (Non-specific lipid-transfer protein 12 OS=Arabidopsis thaliana GN=LTP12 PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 8.811e-22 Identity = 49/109 (44.95%), Postives = 67/109 (61.47%), Query Frame = -2 Query: 251 LVCALRLCILVTAPVTNAITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLPRQCGVSIPYKISPNTDCSRV 577 + C + L I + +P + I CG VT +LA C+ +L G P CC GV+SL A+TTPDR+ C CLK A + I G+N ++ A LP CGVSIPY IS +T+C + Sbjct: 8 ITCLIVLTIYMASPTESTIQCGTVTSTLAQCLTYLTNSGPLPSQ-CCVGVKSLYQLAQTTPDRKQVCECLKLAGKEIKGLNTDLVAALPTTCGVSIPYPISFSTNCDSI 115
BLAST of CB305027 vs. ExPASy Swiss-Prot
Match: NLTP5_ARATH (Non-specific lipid-transfer protein 5 OS=Arabidopsis thaliana GN=LTP5 PE=1 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.503e-21 Identity = 58/115 (50.43%), Postives = 74/115 (64.35%), Query Frame = -2 Query: 248 LKLVCALRLCILVTAPVTN--AITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPG-INANVAAGLPRQCGVSIPYKISPNTDCSRVR 583 LKL + +C+LVTAP+ + AI+CG VTGSL C +L GG F P CC+GV+ LN ARTT DRQ AC C++ A R++ +NA AA LP C V I Y IS T+C+ VR Sbjct: 5 LKLSTLVIVCMLVTAPMASEAAISCGAVTGSLGQCYNYLTRGG-FIPRGCCSGVQRLNSLARTTRDRQQACRCIQGAARALGSRLNAGRAARLPGACRVRISYPISARTNCNTVR 118
BLAST of CB305027 vs. ExPASy Swiss-Prot
Match: NLTP_AMACA (Non-specific lipid-transfer protein OS=Amaranthus caudatus PE=1 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.834e-20 Identity = 46/94 (48.94%), Postives = 61/94 (64.89%), Query Frame = -2 Query: 248 AITCGQVTGSLAPCIAFLRTGGRFPPPP-CCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLPRQCGVSIPYKISPNTDCSRVR 526 A+TC VT +L PC+ +L+ G PPP CC GVRSL AA+T DR+ ACNC+K A + +N VAA L QCGV + Y +SPN +C+ V+ Sbjct: 1 AVTCTVVTKALGPCMTYLKGTGATPPPANCCAGVRSLKAAAQTVADRRMACNCMKSAAQKTKSLNYKVAARLASQCGVRMSYSVSPNVNCNSVQ 94
BLAST of CB305027 vs. ExPASy Swiss-Prot
Match: NLTP1_AMAHP (Non-specific lipid-transfer protein 1 OS=Amaranthus hypochondriacus PE=1 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.834e-20 Identity = 46/94 (48.94%), Postives = 61/94 (64.89%), Query Frame = -2 Query: 248 AITCGQVTGSLAPCIAFLRTGGRFPPPP-CCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLPRQCGVSIPYKISPNTDCSRVR 526 A+TC VT +L PC+ +L+ G PPP CC GVRSL AA+T DR+ ACNC+K A + +N VAA L QCGV + Y +SPN +C+ V+ Sbjct: 1 AVTCTVVTKALGPCMTYLKGTGATPPPANCCAGVRSLKAAAQTVADRRMACNCMKSAAQKTKSLNYKVAARLASQCGVRMSYSVSPNVNCNSVQ 94
BLAST of CB305027 vs. ExPASy Swiss-Prot
Match: NLTP3_ORYSJ (Non-specific lipid-transfer protein 3 OS=Oryza sativa subsp. japonica GN=LTP110-A PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 6.314e-20 Identity = 44/112 (39.29%), Postives = 69/112 (61.61%), Query Frame = -2 Query: 251 ALKLVCALRLCILVTAPVTNAITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLPRQCGVSIPYKISPNTDCSRV 586 AL + A+ +V + A++CG VT S+APC++++ P CC+GVR+LNG A ++ DR+ AC+CLK S +N AA +P +CGVS+ + IS + DCS++ Sbjct: 9 ALVALVAVVAAAVVAERASAAVSCGDVTSSIAPCLSYVMGRESSPSSSCCSGVRTLNGKASSSADRRTACSCLKNMASSFRNLNMGNAASIPSKCGVSVAFPISTSVDCSKI 120
BLAST of CB305027 vs. ExPASy Swiss-Prot
Match: NLTP3_ORYSI (Non-specific lipid-transfer protein 3 OS=Oryza sativa subsp. indica GN=LTP110-A PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 6.314e-20 Identity = 44/112 (39.29%), Postives = 69/112 (61.61%), Query Frame = -2 Query: 251 ALKLVCALRLCILVTAPVTNAITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLPRQCGVSIPYKISPNTDCSRV 586 AL + A+ +V + A++CG VT S+APC++++ P CC+GVR+LNG A ++ DR+ AC+CLK S +N AA +P +CGVS+ + IS + DCS++ Sbjct: 9 ALVALVAVVAAAVVAERASAAVSCGDVTSSIAPCLSYVMGRESSPSSSCCSGVRTLNGKASSSADRRTACSCLKNMASSFRNLNMGNAASIPSKCGVSVAFPISTSVDCSKI 120
BLAST of CB305027 vs. ExPASy Swiss-Prot
Match: NLTP1_WHEAT (Non-specific lipid-transfer protein (Fragment) OS=Triticum aestivum PE=1 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 1.407e-19 Identity = 47/109 (43.12%), Postives = 67/109 (61.47%), Query Frame = -2 Query: 251 LVCALRLCILVTAPVTNAITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLPRQCGVSIPYKISPNTDCSRV 577 + AL L + AI CG V + PC+++++ GG P CC+GV++L+ AR+ DRQ+ACNCLK R I +N + A +P +CGV++PY IS N DCSRV Sbjct: 6 MAVALVLMLAAVPRAAVAIDCGHVDSLVRPCLSYVQ-GGPGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLNEDNARSIPPKCGVNLPYTISLNIDCSRV 113
BLAST of CB305027 vs. ExPASy Swiss-Prot
Match: NLTPB_ARATH (Non-specific lipid-transfer protein 11 OS=Arabidopsis thaliana GN=LTP11 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.031e-18 Identity = 45/92 (48.91%), Postives = 55/92 (59.78%), Query Frame = -2 Query: 251 AITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLPRQCGVSIPYKISPNTDCSRV 526 AI C QV LA C+ +L+ GG P P CCNG+ SL AA DRQ ACNCLK +IPGIN + A LP +CGV+I S DC+ + Sbjct: 28 AIACPQVNMYLAQCLPYLKAGGN-PSPMCCNGLNSLKAAAPEKADRQVACNCLKSVANTIPGINDDFAKQLPAKCGVNIGVPFSKTVDCNSI 118 The following BLAST results are available for this feature:
BLAST of CB305027 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 81
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Sequences
The
following sequences are available for this feature:
EST sequence >CB305027 ID=CB305027; Name=CB305027; organism=Citrus sinensis; type=EST; length=635bpback to top |