CB305027
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB305027 vs. ExPASy Swiss-Prot
Match: NLTP1_HELAN (Non-specific lipid-transfer protein AP10 OS=Helianthus annuus PE=1 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 7.719e-18 Identity = 41/92 (44.57%), Postives = 59/92 (64.13%), Query Frame = -2 Query: 251 AITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLPRQCGVSIPYKISPNTDCSRV 526 AITC VTG+L PC+ +LR+GG+ P P CC G + L GA RT DR+ AC C K A + + ++A+ LP +CG+S I+PN +C+ + Sbjct: 26 AITCNDVTGNLTPCLPYLRSGGK-PTPACCAGAKKLLGATRTQADRRTACKCAKTAAPQLK-VRPDMASSLPGKCGISTSIPINPNVNCNTI 115
BLAST of CB305027 vs. ExPASy Swiss-Prot
Match: NLTPA_RICCO (Non-specific lipid-transfer protein A OS=Ricinus communis PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.901e-16 Identity = 41/91 (45.05%), Postives = 53/91 (58.24%), Query Frame = -2 Query: 251 ITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLPRQCGVSIPYKISPNTDCSRV 523 + CGQV SLA CI FL G P CC GV++L A T+ DR+AAC C+K A P I + A+ LP++CGV I IS T+C + Sbjct: 1 VDCGQVNSSLASCIPFLTGGVASPSASCCAGVQNLKTLAPTSADRRAACECIKAAAARFPTIKQDAASSLPKKCGVDINIPISKTTNCQAI 91
BLAST of CB305027 vs. ExPASy Swiss-Prot
Match: NLTP_PINTA (Non-specific lipid-transfer protein OS=Pinus taeda PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.235e-16 Identity = 49/123 (39.84%), Postives = 64/123 (52.03%), Query Frame = -2 Query: 251 MAALKLVCALRLCILVTA--------PVTNAITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLPRQCGVS-IPYKISPNTDCSRV 592 MA K+V A+ + LV PV AI+C QV ++ PC +L P CC +R L+ + TPDRQA CNCLK +S G+ AA LP C V+ + ISPN DCS+V Sbjct: 1 MAVKKMVEAVFVVGLVVTMMNVWGAVPVEGAISCNQVVSAMTPCATYLIGNAATPAATCCPSIRGLDSQVKATPDRQAVCNCLKTQAKSY-GVKLGKAANLPGLCKVTDLNVPISPNVDCSKV 122
BLAST of CB305027 vs. ExPASy Swiss-Prot
Match: NLTP8_ARATH (Non-specific lipid-transfer protein 8 OS=Arabidopsis thaliana GN=LTP8 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.609e-15 Identity = 37/93 (39.78%), Postives = 54/93 (58.06%), Query Frame = -2 Query: 251 NAITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLPRQCGVSIPYKISPNTDCSRV 529 +AI+C V L PC+++L +G PP CC+GV+SL A T+ D++AAC C+K S+ + +A L CG S+P SP DC+ V Sbjct: 24 SAISCSVVLQDLQPCVSYLTSGSGNPPETCCDGVKSLAAATTTSADKKAACQCIKSVANSVT-VKPELAQALASNCGASLPVDASPTVDCTTV 115
BLAST of CB305027 vs. ExPASy Swiss-Prot
Match: NLTPA_ARATH (Non-specific lipid-transfer protein 10 OS=Arabidopsis thaliana GN=LTP10 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.745e-15 Identity = 42/112 (37.50%), Postives = 62/112 (55.36%), Query Frame = -2 Query: 248 LRLCILVTAPVT----NAITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYR--SIPGINANVAAGLPRQCGVSIPYKISPNTDCSRVR 565 L LC+L+ + AI+C V +L PC+ ++ GG P CCNG+R L+ A + D+Q C C+K S I AA LP +CGV +PYKI P+T+C+ ++ Sbjct: 6 LPLCLLLASIFAWGSEAAISCNAVQANLYPCVVYVVQGGAIPYS-CCNGIRMLSKQATSASDKQGVCRCIKSVVGRVSYSSIYLKKAAALPGKCGVKLPYKIDPSTNCNSIK 116
BLAST of CB305027 vs. ExPASy Swiss-Prot
Match: NLTP6_ARATH (Non-specific lipid-transfer protein 6 OS=Arabidopsis thaliana GN=LTP6 PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.043e-14 Identity = 39/96 (40.62%), Postives = 56/96 (58.33%), Query Frame = -2 Query: 248 AITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSI---PGINANVAAGLPRQCGVSIPYKISPNTDCSRVR 526 A++C V L PC++++ GG P CCNG+ +L A+T+ DRQ C C+K A + P N A LP +CGV +PYK SP+TDC ++ Sbjct: 20 AVSCNTVIADLYPCLSYVTQGGPVPTL-CCNGLTTLKSQAQTSVDRQGVCRCIKSAIGGLTLSPRTIQN-ALELPSKCGVDLPYKFSPSTDCDSIQ 113
BLAST of CB305027 vs. ExPASy Swiss-Prot
Match: NLTPB_RICCO (Non-specific lipid-transfer protein B OS=Ricinus communis PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.175e-12 Identity = 35/91 (38.46%), Postives = 47/91 (51.65%), Query Frame = -2 Query: 251 ITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLPRQCGVSIPYKISPNTDCSRV 523 + CGQV +L+ C+ FL P CC GV L A T D++ AC C+K A P I + A+ LP +CGV I IS T+C + Sbjct: 1 VNCGQVNKALSSCVPFLTGFDTTPSLTCCAGVMELKRLAPTVKDKRIACECVKTAAARYPNIREDAASSLPYKCGVVINVPISKTTNCHEI 91
BLAST of CB305027 vs. ExPASy Swiss-Prot
Match: NLT22_PARJU (Probable non-specific lipid-transfer protein 2 OS=Parietaria judaica PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.710e-12 Identity = 36/121 (29.75%), Postives = 64/121 (52.89%), Query Frame = -2 Query: 251 ILMAALKLVCALRLCI----LVTAPVTNAITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLPRQCGVSIPY-KISPNTDCSRV 598 + MAAL ++ A L +AP CG+V + PC+ F++ + P CC+G + L+ +TT ++ AC C+ A + I GI + A +P++CG++ I+ + DCS++ Sbjct: 4 VSMAALVVIAAALAWTSSAELASAPAPGEGPCGKVVHHIMPCLKFVKGEEKEPSKSCCSGTKKLSEEVKTTEQKREACKCIVAATKGISGIKNELVAEVPKKCGITTTLPPITADFDCSKI 124
BLAST of CB305027 vs. ExPASy Swiss-Prot
Match: NLT13_PARJU (Probable non-specific lipid-transfer protein 1 OS=Parietaria judaica PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.080e-11 Identity = 31/90 (34.44%), Postives = 52/90 (57.78%), Query Frame = -2 Query: 260 TCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLPRQCGVSIPYKISP---NTDC 520 TCG V G+L PC+ F++ + P CC+G + L+G +T P R AC C++ A ++ I+ + + +P+ CG+ + K+ P N DC Sbjct: 39 TCGTVVGALMPCLPFVQGKEKEPSKGCCSGAKRLDGETKTGPQRVHACECIQTAMKTYSDIDGKLVSEVPKHCGI-VDSKLPPIDVNMDC 127
BLAST of CB305027 vs. ExPASy Swiss-Prot
Match: NLT21_PARJU (Probable non-specific lipid-transfer protein 2 OS=Parietaria judaica PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.358e-11 Identity = 30/100 (30.00%), Postives = 57/100 (57.00%), Query Frame = -2 Query: 248 APVTNAITCGQVTGSLAPCIAFLRTGGRFPPPPCCNGVRSLNGAARTTPDRQAACNCLKQAYRSIPGINANVAAGLPRQCGV--SIPYKISPNTDCSRVR 541 AP CG+V + PC+ F++ + P CC+G + L+ +TT ++ AC C+ +A + I GI + A +P++C + ++P I+ + DCS+++ Sbjct: 27 APAPGEEACGKVVQDIMPCLHFVKGEEKEPSKECCSGTKKLSEEVKTTEQKREACKCIVRATKGISGIKNELVAEVPKKCDIKTTLP-PITADFDCSKIQ 125 The following BLAST results are available for this feature:
BLAST of CB305027 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 81
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Sequences
The
following sequences are available for this feature:
EST sequence >CB305027 ID=CB305027; Name=CB305027; organism=Citrus sinensis; type=EST; length=635bpback to top |