CB305030

Overview
NameCB305030
Unique NameCB305030
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length583
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB305030 vs. ExPASy Swiss-Prot
Match: VPS34_SCHPO (Phosphatidylinositol 3-kinase vps34 OS=Schizosaccharomyces pombe GN=vps34 PE=2 SV=2)

HSP 1 Score: 154.451 bits (389), Expect = 3.664e-37
Identity = 76/133 (57.14%), Postives = 94/133 (70.68%), Query Frame = -2
Query:  196 DGRLFHVDFGYILGRDPKPFPPPMKLCKEMVEAMGGA-----ERFKSYCCEAYNILRKSSNLILNLFHLMAGSNIPDIASDPEKGILKLQEKFRLDLDDEACVHFFQDLINESVSALFPQMVETIHRWAQYWR 579
            DG  FH DFGYILGRDPK F P MKL KEMVE MGG      ++FKSYC   +  LRKSSNLILNLF LM  +NIPDI  D EK + K++E+F L + +   + +F+ LIN+SVSALFPQ+++ +H  AQY R
Sbjct:  668 DGHFFHADFGYILGRDPKLFSPAMKLSKEMVEGMGGYNSPFYQQFKSYCYTTFTALRKSSNLILNLFSLMVDANIPDIKFDKEKVVYKVKERFCLQMSESDAIKYFEQLINDSVSALFPQIIDRMHNLAQYMR 800          
BLAST of CB305030 vs. ExPASy Swiss-Prot
Match: VPS34_CANAL (Phosphatidylinositol 3-kinase VPS34 OS=Candida albicans GN=VPS34 PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.011e-35
Identity = 72/133 (54.14%), Postives = 93/133 (69.92%), Query Frame = -2
Query:  196 DGRLFHVDFGYILGRDPKPFPPPMKLCKEMVEAMGGAER-----FKSYCCEAYNILRKSSNLILNLFHLMAGSNIPDIASDPEKGILKLQEKFRLDLDDEACVHFFQDLINESVSALFPQMVETIHRWAQYWR 579
            +G+ +H DFGYILGRDPKPFPP MKL  ++++ MGG        FKSYC   Y  LRK+SNLILNLF LM  +NIPDI  DP + I K+QEKF L + +E  +  FQ+LIN+SV+A  P +++ +H  AQYWR
Sbjct:  887 NGKFWHADFGYILGRDPKPFPPLMKLPIQVIDGMGGLHHENYNVFKSYCFITYTTLRKNSNLILNLFQLMLDANIPDIQFDPSRVIEKVQEKFCLQMTEEEAILHFQNLINDSVNAFLPVVIDRLHSLAQYWR 1019          
BLAST of CB305030 vs. ExPASy Swiss-Prot
Match: PI3K1_DICDI (Phosphatidylinositol 3-kinase 1 OS=Dictyostelium discoideum GN=pikA PE=2 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 9.383e-17
Identity = 51/133 (38.35%), Postives = 70/133 (52.63%), Query Frame = -2
Query:  208 GRLFHVDFGYILGRDPKPFP-----PPMKLCKEMVEAMGGAERFK-----SYCCEAYNILRKSSNLILNLFHLMAGSNIPDIASDPEKGILKLQEKFRLDLDDEACVHFFQDLINESVSALFPQMVETIHRWA 576
            GRLFH+DFG+ LG   K F       P     +    MGG E FK     +YCC AYNI+RK++ L +NLF +M  + IP++ S  +   LK  E F ++L DE     F  LI+ES++    Q+    H  A
Sbjct: 1439 GRLFHIDFGHFLGNYKKKFGFKRERAPFVFTPDFCYVMGGKESFKFSQFVNYCCTAYNIVRKNAKLFMNLFAMMVSTGIPELQSMEDLNYLK--ESFSIELSDEKAREKFVALIHESLATKTTQLNNFFHHLA 1569          
BLAST of CB305030 vs. ExPASy Swiss-Prot
Match: PI3K3_DICDI (Phosphatidylinositol 3-kinase 3 OS=Dictyostelium discoideum GN=pikC PE=2 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 1.355e-15
Identity = 48/131 (36.64%), Postives = 73/131 (55.73%), Query Frame = -2
Query:  217 GRLFHVDFGYILGRDPKPFP------PPMKLCKEMVEAMGGAER-----FKSYCCEAYNILRKSSNLILNLFHLMAGSNIPDIASDPEKGILKLQEKFRLDLDDEACVHFFQDLINESVSALFPQMVETIH 576
            G LFH+DFG+ LG   K F        P  L  + V  +GG +      F   CC+A+NI+R ++++ +N+F LM  + IP++ S  E  I+ L++KFRLDL D     +F+ LI+ES+  L   +   IH
Sbjct: 1462 GHLFHIDFGHFLGNF-KTFAGFQREKAPFVLTPDFVYVIGGKDSPNFAFFVDICCKAFNIIRSNAHVFINMFELMLSTGIPELRS--ENDIVYLRDKFRLDLTDAEASEYFKKLIHESIGTLTTTINFAIH 1589          
BLAST of CB305030 vs. ExPASy Swiss-Prot
Match: PI3K2_DICDI (Phosphatidylinositol 3-kinase 2 OS=Dictyostelium discoideum GN=pikB PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 4.511e-11
Identity = 42/133 (31.58%), Postives = 66/133 (49.62%), Query Frame = -2
Query:  208 GRLFHVDFGYILGRDPKPFP-----PPMKLCKEMVEAMGGAE-----RFKSYCCEAYNILRKSSNLILNLFHLMAGSNIPDIASDPEKGILKLQEKFRLDLDDEACVHFFQDLINESVSALFPQMVETIHRWA 576
            G LFH+DFG+ LG   K +       P     + +  +GG +     RF + CC AYNILRK+++L +NLF LM  + IP++     + I  L++     L DE     F   I+ +++     + +  H WA
Sbjct: 1726 GHLFHIDFGHFLGNYKKKYGFKRERAPFIFTPQYMAIVGGKDSENFKRFVTTCCSAYNILRKNTDLFINLFQLMLSTGIPEL--QVAEDIDYLRKALAPGLSDEEAAEEFTKNISVALNTKTVLLNDIFHGWA 1856          
BLAST of CB305030 vs. ExPASy Swiss-Prot
Match: P3C2A_PONAB (Phosphatidylinositol-4-phosphate 3-kinase C2 domain-containing subunit alpha OS=Pongo abelii GN=PIK3C2A PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 7.694e-11
Identity = 44/140 (31.43%), Postives = 66/140 (47.14%), Query Frame = -2
Query:  205 GRLFHVDFGYILG---------RDPKPFPPPMKLCKEMVEAMGGAER-------FKSYCCEAYNILRKSSNLILNLFHLMAGSNIPDIASDPEKGILKLQEKFRLDLDDEACVHFFQDLINESVSALFPQMVETIHRWAQ 576
            G +FH+DFG  LG         RD  PF     L  +M   + G E+       F   CC+AYN++RK +NL LNL  LM  S +P++ S  +  +  +++  +    D     FF  LI  S+ ++  +    IH  AQ
Sbjct: 1260 GHMFHIDFGKFLGHAQMFGTFKRDRAPFV----LTSDMAYVINGGEKPTIRFQLFVDLCCQAYNLIRKQTNLFLNLLSLMIPSGLPELTSIQD--LKYVRDALQPQTTDAEATIFFTRLIESSLGSIATKFNFLIHNLAQ 1393          
The following BLAST results are available for this feature:
BLAST of CB305030 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
VPS34_SCHPO3.664e-3757.14Phosphatidylinositol 3-kinase vps34 OS=Schizosacch... [more]
VPS34_CANAL2.011e-3554.14Phosphatidylinositol 3-kinase VPS34 OS=Candida alb... [more]
PI3K1_DICDI9.383e-1738.35Phosphatidylinositol 3-kinase 1 OS=Dictyostelium d... [more]
PI3K3_DICDI1.355e-1536.64Phosphatidylinositol 3-kinase 3 OS=Dictyostelium d... [more]
PI3K2_DICDI4.511e-1131.58Phosphatidylinositol 3-kinase 2 OS=Dictyostelium d... [more]
P3C2A_PONAB7.694e-1131.43Phosphatidylinositol-4-phosphate 3-kinase C2 domai... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0003_IVaR_A12 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0003_IVaR_A12 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB305030 ID=CB305030; Name=CB305030; organism=Citrus sinensis; type=EST; length=583bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTGAGATAATTGTTATTAG
CTAAAAGTTTATCGGAATACAGATCAAATGATACAGCCAAGAATTATTAT
ATACAAACATTTTACAACATTGTTAATGTTCTGTTCTACCGAAGGTGTCT
TCTATCCTTCATACTCACTGTCAATCTAATTTGGTTCTGAGATCAGCGCC
AGTATTGAGCCCACCGATGTATGGTCTCAACCATTTGAGGGAACAAAGCG
CTAACACTTTCATTGATAAGATCCTGGAAGAAGTGTACACAGGCCTCATC
GTCCAAGTCCAACCGAAACTTCTCTTGAAGCTTAAGGATGCCTTTCTCAG
GATCAGAAGCTATGTCAGGAATGTTTGAACCCGCCATCAGATGAAACAGA
TTTAAAATAAGGTTACTAGATTTTCGGAGGATGTTGTATGCTTCACAACA
GTAGGACTTGAACCTTTCCGCTCCTCCCATAGCCTCAACCATTTCTTTGC
ACAGCTTCATTGGAGGGGGAAATGGCTTGGGATCTCGCCCAAGAATATAA
CCAAAATCCACATGGAAAAGACGCCCATCATCC
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