CB305034

Overview
NameCB305034
Unique NameCB305034
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length419
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10213 contig Csv1_Contig10213:83..501. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CB305034 vs. ExPASy Swiss-Prot
Match: SCS_SALOF (1,8-cineole synthase, chloroplastic OS=Salvia officinalis PE=2 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.714e-11
Identity = 29/84 (34.52%), Postives = 52/84 (61.90%), Query Frame = -1 
Query:   42 DNLTVDRRSANYQPSIWDHDFLQSLNSNYTDETYKRRAEELKGKVKTAIKDVTEPLDQLELIDNLQRLGLAYHFEPEIRNILRN 293
            + +   RR+  YQP++WD   +Q  +S Y +E +  RA  +  +V   +++  + + +LELID+L+RLG++ HF+ EI  IL +
Sbjct:   51 NEIQTGRRTGGYQPTLWDFSTIQLFDSEYKEEKHLMRAAGMIAQVNMLLQEEVDSIQRLELIDDLRRLGISCHFDREIVEILNS 134
The following BLAST results are available for this feature:
BLAST of CB305034 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
SCS_SALOF9.714e-1134.521,8-cineole synthase, chloroplastic OS=Salvia offi... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0003_IVaR_B06 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0003_IVaR_B06 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB305034 ID=CB305034; Name=CB305034; organism=Citrus sinensis; type=EST; length=419bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCAGTTGGGGATATTACGCAA
TATGTTCCGAATCTCAGGCTCAAAATGATAAGCCAATCCAAGTCTTTGCA
AATTATCAATCAGCTCCAACTGATCCAGAGGCTCGGTTACATCCTTAATC
GCTGTCTTCACTTTTCCCTTCAGCTCTTCTGCTCGTCTTTTGTATGTTTC
ATCCGTATAGTTGCTATTCAGTGACTGCAAAAAATCATGGTCCCAAATTG
AAGGTTGGTAGTTTGCTGATCTCCTATCAACTGTCAAATTATCATATTTG
GTGCTGACAAGGCATTGGACTGGCTTATTTTTTGCCATGATTCTGATGGC
TGCTCTATTTGTTGCAAGAGGAAGACATTTGAAACCATTTACAGAGGTAG
CCAAGGTTGAGGGATTAAT
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