CB305036
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB305036 vs. ExPASy Swiss-Prot
Match: RS24_YEAST (40S ribosomal protein S24 OS=Saccharomyces cerevisiae GN=RPS24A PE=1 SV=3) HSP 1 Score: 148.673 bits (374), Expect = 2.364e-35 Identity = 74/110 (67.27%), Postives = 91/110 (82.73%), Query Frame = -3 Query: 302 AITIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVRDANAVSVFKFRTHFGGGKSTGFGLIYDSVESAKKFEPKYRLIRNGLATKVEKSRKQMKERKK 631 A+TIRTRK ++N LL+RKQFV+DVLHP RANVSK EL+EKLA +Y + +AVSVF FRT FGGGKS GFGL+Y+SV AKKFEP YRL+R GLA KVEK+ +Q +++KK Sbjct: 4 AVTIRTRKVISNPLLARKQFVVDVLHPNRANVSKDELREKLAEVYKA-EKDAVSVFGFRTQFGGGKSVGFGLVYNSVAEAKKFEPTYRLVRYGLAEKVEKASRQQRKQKK 112
BLAST of CB305036 vs. ExPASy Swiss-Prot
Match: RS24B_SCHPO (40S ribosomal protein S24-B OS=Schizosaccharomyces pombe GN=rps24b PE=2 SV=3) HSP 1 Score: 148.673 bits (374), Expect = 2.364e-35 Identity = 73/115 (63.48%), Postives = 91/115 (79.13%), Query Frame = -3 Query: 290 AITIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVRDANAVSVFKFRTHFGGGKSTGFGLIYDSVESAKKFEPKYRLIRNGLATKVEK-SRKQMKERKKQAKE 631 A+TIRTRKFMTNRLL RKQ V+D+LHPG+AN+SK E++EKLA+MY D+ V F RTHFGGG+STGF LIYDS ES KKFEP YRL+R G A ++K +R+Q K+RK + K+ Sbjct: 4 AVTIRTRKFMTNRLLQRKQMVVDILHPGKANLSKNEIREKLAQMYKT-DSECVQAFGLRTHFGGGRSTGFALIYDSTESMKKFEPHYRLVRVGQAEPIQKVARQQRKQRKNRGKK 117
BLAST of CB305036 vs. ExPASy Swiss-Prot
Match: RS24_XENLA (40S ribosomal protein S24 OS=Xenopus laevis GN=rps24 PE=2 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 3.712e-35 Identity = 73/113 (64.60%), Postives = 90/113 (79.65%), Query Frame = -3 Query: 290 ITIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVRDANAVSVFKFRTHFGGGKSTGFGLIYDSVESAKKFEPKYRLIRNGLATKVEKSRKQMKERKKQAKE 628 +TIRTRKFMTNRLL RKQ VIDVLHPG+A V K E++EKLA+MY + + VF FRTHFGGGK+TGFG+IYDS++ AKK EPK+RL ++GL K + SRKQ KERK + K+ Sbjct: 5 VTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTP-DVIFVFGFRTHFGGGKTTGFGMIYDSLDYAKKNEPKHRLAKHGLYEKKKTSRKQRKERKNRMKK 116 HSP 2 Score: 21.1718 bits (43), Expect = 3.712e-35 Identity = 8/12 (66.67%), Postives = 9/12 (75.00%), Query Frame = -1 Query: 280 KRGKNRQKKIRG 315 K KNR KK+RG Sbjct: 108 KERKNRMKKVRG 119
BLAST of CB305036 vs. ExPASy Swiss-Prot
Match: RS24A_SCHPO (40S ribosomal protein S24-A OS=Schizosaccharomyces pombe GN=rps24a PE=2 SV=3) HSP 1 Score: 146.747 bits (369), Expect = 8.984e-35 Identity = 71/115 (61.74%), Postives = 92/115 (80.00%), Query Frame = -3 Query: 290 AITIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVRDANAVSVFKFRTHFGGGKSTGFGLIYDSVESAKKFEPKYRLIRNGLATKVEK-SRKQMKERKKQAKE 631 A+TIRTRKFMTNRLL RKQ V+D+LHPG+AN+SK +L+EKL +MY DA+AV F RTH+GGG++TGF LIYD VE+ KKFEP YRL+R G A ++K +R+Q K+RK + K+ Sbjct: 4 AVTIRTRKFMTNRLLQRKQMVVDILHPGKANISKNDLREKLGQMYKT-DASAVQAFGLRTHYGGGRTTGFALIYDDVEAMKKFEPHYRLVRVGHAEPIQKVARQQRKQRKNRGKK 117
BLAST of CB305036 vs. ExPASy Swiss-Prot
Match: RS24_MACFA (40S ribosomal protein S24 OS=Macaca fascicularis GN=RPS24 PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.069e-34 Identity = 73/113 (64.60%), Postives = 89/113 (78.76%), Query Frame = -3 Query: 290 ITIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVRDANAVSVFKFRTHFGGGKSTGFGLIYDSVESAKKFEPKYRLIRNGLATKVEKSRKQMKERKKQAKE 628 +TIRTRKFMTNRLL RKQ VI VLHPG+A V K E++EKLA+MY + + VF FRTHFGGGK+TGFG+IYDS++ AKK EPK+RL R+GL K + SRKQ KERK + K+ Sbjct: 5 VTIRTRKFMTNRLLQRKQMVIGVLHPGKATVPKTEIREKLAKMYKTTP-DVIFVFGFRTHFGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKK 116 HSP 2 Score: 21.1718 bits (43), Expect = 1.069e-34 Identity = 8/12 (66.67%), Postives = 9/12 (75.00%), Query Frame = -1 Query: 280 KRGKNRQKKIRG 315 K KNR KK+RG Sbjct: 108 KERKNRMKKVRG 119
BLAST of CB305036 vs. ExPASy Swiss-Prot
Match: RS24_SPOFR (40S ribosomal protein S24 OS=Spodoptera frugiperda GN=RpS24 PE=2 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 4.459e-34 Identity = 73/112 (65.18%), Postives = 89/112 (79.46%), Query Frame = -3 Query: 290 TIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVRDANAVSVFKFRTHFGGGKSTGFGLIYDSVESAKKFEPKYRLIRNGLATKVEKSRKQMKERKKQAKE 625 TIRTRKFMTNRLL+RKQ V DVLHPG+ VSK E++EKLA+MY V + V VF F+T+FGGGKSTGF LIYD+++ AKKFEPK+RL R+GL K +RKQ KERK + K+ Sbjct: 7 TIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTP-DVVFVFGFKTNFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKK 117
BLAST of CB305036 vs. ExPASy Swiss-Prot
Match: RS24_ICTPU (40S ribosomal protein S24 OS=Ictalurus punctatus GN=rps24 PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 8.857e-34 Identity = 70/114 (61.40%), Postives = 89/114 (78.07%), Query Frame = -3 Query: 290 AITIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVRDANAVSVFKFRTHFGGGKSTGFGLIYDSVESAKKFEPKYRLIRNGLATKVEKSRKQMKERKKQAKE 631 ++T+RTRKFMTNRLL RKQ V+DVLHPG+A V K E++EKLA+MY + V VF F+T FGGGK+TGF ++YDS++ AKK EPKYRL R+GL K + SRKQ KERK + K+ Sbjct: 4 SVTLRTRKFMTNRLLQRKQMVLDVLHPGKATVPKTEIREKLAKMYKTTP-DVVFVFGFKTQFGGGKTTGFAMVYDSLDYAKKNEPKYRLARHGLYEKKKTSRKQRKERKNRMKK 116 HSP 2 Score: 21.1718 bits (43), Expect = 8.857e-34 Identity = 8/12 (66.67%), Postives = 9/12 (75.00%), Query Frame = -1 Query: 280 KRGKNRQKKIRG 315 K KNR KK+RG Sbjct: 108 KERKNRMKKVRG 119
BLAST of CB305036 vs. ExPASy Swiss-Prot
Match: RS24_TAKRU (40S ribosomal protein S24 OS=Takifugu rubripes GN=rps24 PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.154e-33 Identity = 70/113 (61.95%), Postives = 88/113 (77.88%), Query Frame = -3 Query: 290 ITIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVRDANAVSVFKFRTHFGGGKSTGFGLIYDSVESAKKFEPKYRLIRNGLATKVEKSRKQMKERKKQAKE 628 +T+RTRKFMTNRLL RKQ V+DVLHPG+A V K E++EKLA+MY + V VF FRT FGGGK+TGF ++YDS++ AKK EPK+RL R+GL K + SRKQ KERK + K+ Sbjct: 5 VTVRTRKFMTNRLLQRKQMVVDVLHPGKATVPKTEIREKLAKMYKTTP-DVVFVFGFRTQFGGGKTTGFAMVYDSLDYAKKNEPKHRLARHGLFEKKKTSRKQRKERKNRMKK 116 HSP 2 Score: 21.1718 bits (43), Expect = 1.154e-33 Identity = 8/12 (66.67%), Postives = 9/12 (75.00%), Query Frame = -1 Query: 280 KRGKNRQKKIRG 315 K KNR KK+RG Sbjct: 108 KERKNRMKKVRG 119
BLAST of CB305036 vs. ExPASy Swiss-Prot
Match: RS24_ORYLA (40S ribosomal protein S24 OS=Oryzias latipes GN=rps24 PE=2 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 9.297e-32 Identity = 68/113 (60.18%), Postives = 86/113 (76.11%), Query Frame = -3 Query: 290 ITIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVRDANAVSVFKFRTHFGGGKSTGFGLIYDSVESAKKFEPKYRLIRNGLATKVEKSRKQMKERKKQAKE 628 +TIRTRKFMTNRLL RKQ V+DVLHPG+A V K E++EKLA+MY + V VF FRT FGGGK+TGF ++YDS++ AKK EPK+RL +GL K + SRKQ ER+ + K+ Sbjct: 5 VTIRTRKFMTNRLLQRKQMVVDVLHPGKATVPKTEIREKLAKMYKT-TPDVVFVFGFRTQFGGGKTTGFAMVYDSLDYAKKNEPKHRLATHGLYEKKKTSRKQRTERQNRMKK 116 The following BLAST results are available for this feature:
BLAST of CB305036 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >CB305036 ID=CB305036; Name=CB305036; organism=Citrus sinensis; type=EST; length=633bpback to top |