CB305039

Overview
NameCB305039
Unique NameCB305039
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length622
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11430 contig Csv1_Contig11430:1424..2045. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C71BC_ARATH (Cytochrome P450 71B12 OS=Arabidopsis thaliana GN=CYP71B12 PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 2.869e-30
Identity = 58/123 (47.15%), Postives = 85/123 (69.11%), Query Frame = -3
Query:  231 RKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAQPLHAVP 587
            R+A+KDV+I G+ +PK   + VN+WAI R+ + W +P  FIPERF+ S  D+KG NFEL+PFG+GRRICPG+ + + ++HL L +L+  FDWKL       ++D+E+ +GL   K  PL  +P
Sbjct:  368 REASKDVKIGGYNIPKKTWIHVNIWAIHRNPNVWKDPEAFIPERFMDSQIDYKGLNFELLPFGSGRRICPGIGMGMALVHLTLINLLYRFDWKLPEGMKVADVDLEESYGLVCPKKIPLQLIP 490          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C71BB_ARATH (Cytochrome P450 71B11 OS=Arabidopsis thaliana GN=CYP71B11 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.428e-29
Identity = 55/123 (44.72%), Postives = 85/123 (69.11%), Query Frame = -3
Query:  231 RKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL----DNHNMDMEDKFGLTVQKAQPLHAVP 587
            R+A+KDV+I G+ +PK   + VN+WAI R+ + W +P  FIPERF+ +  D+KG NFE +PFG+GRR+CPG+ + + ++HL L +L+  FDWKL    +  ++D+E+ +GL   K  PL  +P
Sbjct:  368 REASKDVKIGGYDIPKKTWIHVNIWAIHRNPNVWKDPEAFIPERFMDNQIDYKGLNFEFLPFGSGRRMCPGIGMGMALVHLTLINLLYRFDWKLPEGMEVEDVDLEESYGLVCPKKVPLQLIP 490          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C75A2_SOLME (Flavonoid 3',5'-hydroxylase OS=Solanum melongena GN=CYP75A2 PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 3.172e-29
Identity = 66/134 (49.25%), Postives = 87/134 (64.93%), Query Frame = -3
Query:  234 RLHXXXXXXXPRKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLG---SNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDNHNMD--MEDKFGLTVQKAQPLHAV 620
            R H       PR ++    I G+ +PK  ++ VN+WAIGRD   W+NP  FIPERFL    +  + +G +FELIPFGAGRRIC G  + I M+  +LG+LI+SFDWKL N  +D  ME+ FGL +QKA PL A+
Sbjct:  364 RKHPSTPLNLPRVSSDACTIDGYYIPKNTRLSVNIWAIGRDPDVWENPLEFIPERFLSEKNAKIEHRGNDFELIPFGAGRRICAGTRMGIVMVEYILGTLIHSFDWKLPNDVVDINMEETFGLALQKAVPLEAI 497          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C71BQ_ARATH (Cytochrome P450 71B26 OS=Arabidopsis thaliana GN=CYP71B26 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 5.410e-29
Identity = 65/134 (48.51%), Postives = 82/134 (61.19%), Query Frame = -3
Query:  231 RLHXXXXXXXPRKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAQPLHAVP 620
            RLH       PR    + EI G+T+P   ++ VNVWAIGRD  TW +P  F+PERF  SN D KGQNFEL+ FG+GRRICPGL +   M+   L +++  FDWKL       ++DME+  GLTV K   L  VP
Sbjct:  361 RLHPPTPLLLPRDVITEFEINGYTIPAKTRLHVNVWAIGRDPDTWKDPEMFLPERFNDSNIDAKGQNFELLSFGSGRRICPGLYMGTTMVEFGLANMLYHFDWKLPEGMVVEDIDMEEAPGLTVSKKSELVLVP 494          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C71A8_MENPI (Cytochrome P450 71A8 OS=Mentha piperita GN=CYP71A8 PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 5.410e-29
Identity = 61/131 (46.56%), Postives = 81/131 (61.83%), Query Frame = -3
Query:  234 RLHXXXXXXXPRKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN--HNMDMEDKFGLTVQKAQPLHAV 620
            R H       PR A  DVE+ G+ VP G  V +N WAIGRD ++WD P  F PERFL S+ DFKG +FELIPFGAGRR CPG    +  L   L +L+  FDW+L +    +DM ++ G+ +++  PL A+
Sbjct:  368 RFHTPIPLLVPRVARNDVEVMGYDVPVGTMVMINAWAIGRDPTSWDEPEKFRPERFLNSSVDFKGLDFELIPFGAGRRGCPGTTFPMATLEFTLANLMQKFDWELPHECRELDMSERPGVAIRRVIPLLAI 498          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C71BY_ARATH (Cytochrome P450 71B37 OS=Arabidopsis thaliana GN=CYP71B37 PE=2 SV=2)

HSP 1 Score: 127.102 bits (318), Expect = 7.066e-29
Identity = 61/134 (45.52%), Postives = 82/134 (61.19%), Query Frame = -3
Query:  231 RLHXXXXXXXPRKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAQPLHAVP 620
            RLH       PR+   + EI G+T+P   +++VNVW IGRD  TW +P  F+PERF+ SN D KGQNFEL+PFG+GRR+CP + +   M+   L +L+  FDWKL       ++DME+  GL   K   L  VP
Sbjct:  361 RLHPPAPLLVPREVMSEFEINGYTIPAKTRLYVNVWGIGRDPDTWKDPEEFLPERFVNSNIDAKGQNFELLPFGSGRRMCPAMYMGTTMVEFGLANLLYHFDWKLPEGMVVEDIDMEESPGLNASKKNELVLVP 494          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C71BE_ARATH (Cytochrome P450 71B14 OS=Arabidopsis thaliana GN=CYP71B14 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 7.066e-29
Identity = 54/123 (43.90%), Postives = 85/123 (69.11%), Query Frame = -3
Query:  231 RKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAQPLHAVP 587
            R+A+K ++I G+ +PK   ++VN+WA+ R+ + W +P  FIPERF+ S  D+KG +FEL+PFG+GRR+CPG+ L + ++HL L +L+  FDWKL       ++D+E+ +GL   K  PL  +P
Sbjct:  368 REASKYIKIGGYDIPKKTWIYVNIWAVQRNPNVWKDPEVFIPERFMHSEIDYKGVDFELLPFGSGRRMCPGMGLGMALVHLTLINLLYRFDWKLPEGMNIEDVDLEESYGLVCPKKVPLQLIP 490          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C93A2_SOYBN (Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.205e-28
Identity = 58/124 (46.77%), Postives = 84/124 (67.74%), Query Frame = -3
Query:  231 RKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLG---SNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDNHN--MDMEDKFGLTVQKAQPLHAVP 587
            R+++K V + G+ +P   ++FVNVWAIGRD + W+NP  F PERF     S  D +GQ++  IPFG+GRR CPG  LA++++H+ L  +I  F WK DN N  +DME+K G+T+ +A P+  VP
Sbjct:  369 RESSKSVVVCGYEIPAKTRLFVNVWAIGRDPNHWENPFEFRPERFFENGQSQLDVRGQHYHFIPFGSGRRSCPGTSLALQIVHVNLAIMIQCFQWKFDNGNNKVDMEEKSGITLPRAHPIICVP 492          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C71BW_ARATH (Cytochrome P450 71B35 OS=Arabidopsis thaliana GN=CYP71B35 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.205e-28
Identity = 62/134 (46.27%), Postives = 85/134 (63.43%), Query Frame = -3
Query:  231 RLHXXXXXXXPRKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL----DNHNMDMEDKFGLTVQKAQPLHAVP 620
            RLH       PR+A  + +I G+T+P   ++ VNVWAIGRD  TW +P  F+PERF+ +N D KGQ+FEL+PFG GRRICP + +   M+   L +L+  FDWKL    +  ++D+E+  GLTV K   L  VP
Sbjct:  360 RLHPTTPLLLPREAMSEFDINGYTIPVKTRLHVNVWAIGRDPDTWKDPEVFLPERFMDNNIDAKGQHFELLPFGGGRRICPAIYMGTTMVEFGLANLLYHFDWKLPEGVEVKDIDVEEAPGLTVNKKNELLLVP 493          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C71BV_ARATH (Cytochrome P450 71B34 OS=Arabidopsis thaliana GN=CYP71B34 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.205e-28
Identity = 63/134 (47.01%), Postives = 83/134 (61.94%), Query Frame = -3
Query:  231 RLHXXXXXXXPRKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAQPLHAVP 620
            RLH       PR+A  + EI G+T+P   ++ VNVWAIGRD  TW +P  F+PERF  +N D KGQ+FEL+PFG GRR+CP + +   M+   L +L+  FDWKL       ++DME+  GLTV K   L  VP
Sbjct:  361 RLHPTTPLLIPREAMSEFEINGYTIPVKTRLHVNVWAIGRDPDTWKDPEVFLPERFTDNNIDAKGQHFELLPFGGGRRMCPAVYMGTTMVEFGLANLLYHFDWKLPEGMKVDDIDMEEAPGLTVNKKNELILVP 494          
The following BLAST results are available for this feature:
BLAST of CB305039 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 223
Match NameE-valueIdentityDescription
C71BC_ARATH2.869e-3047.15Cytochrome P450 71B12 OS=Arabidopsis thaliana GN=C... [more]
C71BB_ARATH2.428e-2944.72Cytochrome P450 71B11 OS=Arabidopsis thaliana GN=C... [more]
C75A2_SOLME3.172e-2949.25Flavonoid 3',5'-hydroxylase OS=Solanum melongena G... [more]
C71BQ_ARATH5.410e-2948.51Cytochrome P450 71B26 OS=Arabidopsis thaliana GN=C... [more]
C71A8_MENPI5.410e-2946.56Cytochrome P450 71A8 OS=Mentha piperita GN=CYP71A8... [more]
C71BY_ARATH7.066e-2945.52Cytochrome P450 71B37 OS=Arabidopsis thaliana GN=C... [more]
C71BE_ARATH7.066e-2943.90Cytochrome P450 71B14 OS=Arabidopsis thaliana GN=C... [more]
C93A2_SOYBN1.205e-2846.77Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=... [more]
C71BW_ARATH1.205e-2846.27Cytochrome P450 71B35 OS=Arabidopsis thaliana GN=C... [more]
C71BV_ARATH1.205e-2847.01Cytochrome P450 71B34 OS=Arabidopsis thaliana GN=C... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionFLAVEDO0003_IVaR_C02 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0003_IVaR_C02 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB305039 ID=CB305039; Name=CB305039; organism=Citrus sinensis; type=EST; length=622bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGCTATTAAATNNNATGACT
TTATAGTTTATTGAAGATTAACTCTGTTAAGTTGCGTGTCTACATAAAAA
AAAATAAGAGCGCCCACACCTGAGAATGATTACACACACATATAACTAAC
CACCAAGCGCTTTATATAGTGGCTACCACCAAGCGCTTTATATATTGGCT
ACGAACTATAGTATAGAACTAGATGGCACCAGGGACAGCATGAAGGGGTT
GAGCCTTCTGTACGGTGAGGCCAAATTTATCTTCCATGTCCATGTTGTGG
TTATCAAGCTTCCAATCAAAAGAGTTAATAAGTGAACCCAACATTAGATG
TAACATTCTGATTGCCAATGGTAAACCAGGACAAATTCGTCGTCCAGCTC
CGAAGGGAATTAGCTCAAAATTCTGGCCTTTGAAATCAGCATTTGACCCT
AAGAACCTTTCGGGAATAAAAGTGTGAGGGTTGTCCCATGTGCTTTCATC
TCTGCCAATAGCCCATACATTGACAAAAACTTGTGCACCTTTTGGCACTG
TGAAGCCTGCAATTTCAACATCTTTTGTGGCTTTGCGGGGAAGTAATAAG
GGAGCTGCAGGGTGCAATCTCA
back to top