CB305039

Overview
NameCB305039
Unique NameCB305039
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length622
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C82A4_SOYBN (Cytochrome P450 82A4 OS=Glycine max GN=CYP82A4 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.179e-21
Identity = 49/132 (37.12%), Postives = 78/132 (59.09%), Query Frame = -3
Query:  234 RLHXXXXXXXPRKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADF--KGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFD-WKLDNHNMDMEDKFGLTVQKAQPLHAV 620
            RL+       PR+  +D  + G+ V KG ++  N+W I  D + W +P  F P+RFL ++ D   KG +F+L+PFG+GRR+CPG+   ++ +HL L S ++SF+        +DM + FG+T  KA PL  +
Sbjct:  381 RLYAPGPLSSPREFAEDCTLGGYHVKKGTRLITNIWKIHTDPNVWSDPFEFKPDRFLTTHKDIDVKGHHFQLLPFGSGRRVCPGISFGLQTVHLALASFLHSFEILNPSTEPLDMTEAFGVTNTKATPLEVL 512          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C7D94_MENGR (Cytochrome P450 71D94 OS=Mentha gracilis GN=CYP71D94 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.179e-21
Identity = 45/102 (44.12%), Postives = 64/102 (62.75%), Query Frame = -3
Query:  282 RKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDNHNMDME 587
            R++ ++ EI GF +P   ++ +N W+IGRD   W++P TF PERF   + DF G +FE IPFGAG+RICPGL   +  + + L  L+  FDWKL     D +
Sbjct:  366 RQSREECEINGFYIPARTRILINAWSIGRDPLYWEDPDTFRPERFDEVSRDFMGNDFEFIPFGAGQRICPGLHFGLANVEIPLAQLLYHFDWKLPQGMTDAD 467          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C71AG_ARATH (Cytochrome P450 71A16 OS=Arabidopsis thaliana GN=CYP71A16 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.179e-21
Identity = 53/138 (38.41%), Postives = 78/138 (56.52%), Query Frame = -3
Query:  225 RLHXXXXXXXPRKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTW-DNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN-----HNMDMEDKFGLTVQKAQPLHAVPGA 620
            RLH       PR  ++DV++ G+ +  G QV +N WAI RD +TW  +   F PER   S  DF G+NF+ IPFGAGRR+CPG+ L   M  + L +L+  FDW++++        D+ +  G+ V +  PL   P +
Sbjct:  359 RLHPPLPLLVPRLLSEDVKLKGYDITAGTQVIINAWAIQRDTATWGSDAQEFRPERHFDSTWDFVGRNFKYIPFGAGRRLCPGIGLGSVMASVTLANLVKRFDWRVEDGPSGYDKPDLVEGAGIDVCRKFPLVVFPSS 496          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C71C4_MAIZE (Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 4.152e-21
Identity = 52/140 (37.14%), Postives = 77/140 (55.00%), Query Frame = -3
Query:  225 RLHXXXXXXXPRKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSN----ADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL----DNHNMDMEDKFGLTVQKAQPLHAVPGA 620
            RLH       P  +    E+AG+T+P   +V VN WA+GR    W+  + F+PERFL  +     D K   F+ + FG+GRR+CPG+  A   +  ML +L+  FDW+L       ++DM + FG+TV + + L  VP A
Sbjct:  398 RLHPPVPLLLPHYSLDACEVAGYTIPANTRVVVNAWALGRHSGYWERENEFVPERFLSGDVAGGVDLKPNEFQFLAFGSGRRMCPGVHSASATIEAMLSNLMYRFDWQLPAGMKAEDVDMTEVFGITVSRKEKLLLVPQA 537          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C78A4_PINRA (Cytochrome P450 78A4 OS=Pinus radiata GN=CYP78A4 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.208e-20
Identity = 48/125 (38.40%), Postives = 74/125 (59.20%), Query Frame = -3
Query:  231 RKATKDVEIA-GFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFL----GSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDW-KLDNHNMDMEDKFGLTVQKAQPLHAVP 587
            R +T+DV +  G  VP G    VN+W+I  D + W++P+ F PERF+    G   D +G +  L PFGAGRR+CPG  L +  ++L +  L++ F+W     H +D+ +   L+ + A+PLH VP
Sbjct:  418 RLSTEDVNMGDGMCVPAGTTAMVNMWSITHDPNIWESPYEFRPERFVVFEGGEEVDVRGNDLRLAPFGAGRRVCPGKALGLATVNLWVAKLLHHFEWLPHAEHPVDLSEVLKLSCEMARPLHCVP 542          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C82A1_PEA (Cytochrome P450 82A1 (Fragment) OS=Pisum sativum GN=CYP82A1 PE=2 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 1.578e-20
Identity = 50/132 (37.88%), Postives = 78/132 (59.09%), Query Frame = -3
Query:  234 RLHXXXXXXXPRKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSN--ADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFD-WKLDNHNMDMEDKFGLTVQKAQPLHAV 620
            RL+       PR+ T+D  I G+ + KG ++  N+W I RD S W +P  F PERFL ++   D +GQNFEL+PFG+GRR+C G+ L + M+H +L + ++SF+       ++D+ +       KA PL  +
Sbjct:  400 RLYPPAPFSSPREFTEDCTIGGYHIKKGTRLMPNLWKIHRDPSVWPDPLEFKPERFLSTHKDVDVRGQNFELLPFGSGRRMCAGMSLGLHMVHYILANFLHSFEILNPSPESIDVTEVLEFVTTKATPLEVL 531          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C81F1_ARATH (Cytochrome P450 81F1 OS=Arabidopsis thaliana GN=CYP81F1 PE=2 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 3.515e-20
Identity = 51/120 (42.50%), Postives = 72/120 (60.00%), Query Frame = -3
Query:  234 RKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFL-GSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWK-LDNHNMDMEDKFGLTVQKAQPLHAV 587
            R  T D++I G+ VP+   V VN WAI RD   W+ P  F P+R+  G  +D+    ++L+PFG GRR CPG  L  R++ L LGSLI  F+W+ +    MDM +  GL ++K  PL A+
Sbjct:  371 RSPTDDMKIGGYDVPRDTIVMVNAWAIHRDPEIWEEPEKFNPDRYNDGCGSDY--YVYKLMPFGNGRRTCPGAGLGQRIVTLALGSLIQCFEWENVKGEEMDMSESTGLGMRKMDPLRAM 488          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C93B1_GLYEC (Licodione synthase OS=Glycyrrhiza echinata GN=CYP93B1 PE=1 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 4.590e-20
Identity = 49/135 (36.30%), Postives = 81/135 (60.00%), Query Frame = -3
Query:  231 RKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFL------GSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDW----------KLDNHNMDMEDKFGLTVQKAQPLHAVP 587
            R+   +  +  + +P+ + +FVNVW+IGR+   WDNP  F PERFL          D +G +F+L+PFG+GRR+CPG+ LA++ +  +LG++I  FD+          K D+  ++++++ GLT  +A  L  VP
Sbjct:  374 RRCVAECTVENYVIPEDSLLFVNVWSIGRNPKFWDNPLEFRPERFLKLEGDSSGVVDVRGSHFQLLPFGSGRRMCPGVSLAMQEVPALLGAIIQCFDFHVVGPKGEILKGDDIVINVDERPGLTAPRAHNLVCVP 508          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C82A2_SOYBN (Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.023e-19
Identity = 53/129 (41.09%), Postives = 75/129 (58.14%), Query Frame = -3
Query:  243 RLHXXXXXXXPRKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADF--KGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFD-WKLDNHNMDMEDKFGLTVQKAQPL 620
            RL+       PR+  +D  I G+TV KG ++  N+  I  D + W NP  F PERFL ++ D   KGQ+F+L+PFG GRRICPG+ L ++ + L L S ++SF+        +DM + F  T  KA PL
Sbjct:  378 RLYPPAPLSRPREFEEDCTIGGYTVKKGTRLITNLSKIHTDHNVWSNPLEFKPERFLTTDKDIDMKGQHFQLLPFGGGRRICPGINLGLQTVRLTLASFLHSFEILNPSTEPLDMTEVFRATNTKATPL 506          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C99A3_ORYSJ (Cytochrome P450 99A3 OS=Oryza sativa subsp. japonica GN=CYP99A3 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.336e-19
Identity = 48/115 (41.74%), Postives = 65/115 (56.52%), Query Frame = -3
Query:  234 EIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAQPLHAV 566
            EI G+ + +G +V +N WA+ R    WD+   FIPERF    ADFKG  FE +PFG GRR CPG   A+  L L++  L+  FDW L +     ++DME   G T ++   L  V
Sbjct:  377 EIGGYEIVEGTRVLINSWAMARSPEYWDDAEKFIPERFEDGTADFKGSRFEYLPFGTGRRRCPGDIFAMATLELIVARLLYYFDWSLPDGMQPGDIDMELVVGATARRKNHLQLV 491          
The following BLAST results are available for this feature:
BLAST of CB305039 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 223
Match NameE-valueIdentityDescription
C82A4_SOYBN3.179e-2137.12Cytochrome P450 82A4 OS=Glycine max GN=CYP82A4 PE=... [more]
C7D94_MENGR3.179e-2144.12Cytochrome P450 71D94 OS=Mentha gracilis GN=CYP71D... [more]
C71AG_ARATH3.179e-2138.41Cytochrome P450 71A16 OS=Arabidopsis thaliana GN=C... [more]
C71C4_MAIZE4.152e-2137.14Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 S... [more]
C78A4_PINRA1.208e-2038.40Cytochrome P450 78A4 OS=Pinus radiata GN=CYP78A4 P... [more]
C82A1_PEA1.578e-2037.88Cytochrome P450 82A1 (Fragment) OS=Pisum sativum G... [more]
C81F1_ARATH3.515e-2042.50Cytochrome P450 81F1 OS=Arabidopsis thaliana GN=CY... [more]
C93B1_GLYEC4.590e-2036.30Licodione synthase OS=Glycyrrhiza echinata GN=CYP9... [more]
C82A2_SOYBN1.023e-1941.09Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=... [more]
C99A3_ORYSJ1.336e-1941.74Cytochrome P450 99A3 OS=Oryza sativa subsp. japoni... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0003_IVaR_C02 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0003_IVaR_C02 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB305039 ID=CB305039; Name=CB305039; organism=Citrus sinensis; type=EST; length=622bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGCTATTAAATNNNATGACT
TTATAGTTTATTGAAGATTAACTCTGTTAAGTTGCGTGTCTACATAAAAA
AAAATAAGAGCGCCCACACCTGAGAATGATTACACACACATATAACTAAC
CACCAAGCGCTTTATATAGTGGCTACCACCAAGCGCTTTATATATTGGCT
ACGAACTATAGTATAGAACTAGATGGCACCAGGGACAGCATGAAGGGGTT
GAGCCTTCTGTACGGTGAGGCCAAATTTATCTTCCATGTCCATGTTGTGG
TTATCAAGCTTCCAATCAAAAGAGTTAATAAGTGAACCCAACATTAGATG
TAACATTCTGATTGCCAATGGTAAACCAGGACAAATTCGTCGTCCAGCTC
CGAAGGGAATTAGCTCAAAATTCTGGCCTTTGAAATCAGCATTTGACCCT
AAGAACCTTTCGGGAATAAAAGTGTGAGGGTTGTCCCATGTGCTTTCATC
TCTGCCAATAGCCCATACATTGACAAAAACTTGTGCACCTTTTGGCACTG
TGAAGCCTGCAATTTCAACATCTTTTGTGGCTTTGCGGGGAAGTAATAAG
GGAGCTGCAGGGTGCAATCTCA
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