CB305039

Overview
NameCB305039
Unique NameCB305039
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length622
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C81E1_GLYEC (Isoflavone 2'-hydroxylase OS=Glycyrrhiza echinata GN=CYP81E1 PE=1 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 1.929e-18
Identity = 53/130 (40.77%), Postives = 70/130 (53.85%), Query Frame = -3
Query:  234 RLHXXXXXXXPRKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN-HNMDMEDKFGLTVQKAQPLHAV 620
            RL+       P   + +  I G+ VP+   V +N WAI RD   W    TF PERF     + KG+  +LI FG GRR CPG  LAIR + + L  LI  FDWKL N   +D+ ++ G T+ K  PL A+
Sbjct:  362 RLYTPAPLLLPHSTSDECNIGGYKVPQDTIVLINAWAIHRDPELWTEATTFKPERF-----EKKGELEKLIAFGMGRRACPGEGLAIRAISMTLALLIQCFDWKLINGDKIDLAERDGFTLTKLVPLKAM 486          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C78AB_ORYSJ (Cytochrome P450 78A11 OS=Oryza sativa subsp. japonica GN=CYP78A11 PE=1 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 2.519e-18
Identity = 48/124 (38.71%), Postives = 72/124 (58.06%), Query Frame = -3
Query:  237 RKATKDVEIA-GFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFL----GSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDNHN--MDMEDKFGLTVQKAQPLHA 587
            R AT DV +A G  VP G    VN+WAI  D   W +P  F PERF+    G++ D +G +  L PFGAGRR+CPG  L +  + L +  L+++FDW L + +  + +++   L+++   PL A
Sbjct:  422 RLATADVGLANGMVVPAGTTAMVNMWAITHDGEVWADPEAFAPERFIPSEGGADVDVRGGDLRLAPFGAGRRVCPGKNLGLATVTLWVARLVHAFDWFLPDGSPPVSLDEVLKLSLEMKTPLAA 545          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C89A2_ARATH (Cytochrome P450 89A2 OS=Arabidopsis thaliana GN=CYP89A2 PE=2 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 3.290e-18
Identity = 49/133 (36.84%), Postives = 70/133 (52.63%), Query Frame = -3
Query:  234 RLHXXXXXXXPRKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSN--ADFKG-QNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWK-LDNHNMDMEDKFGLTVQKAQPLHAV 620
            R H       P   T+D  + G+ VPK   +   V  IGRD   W+ P  F PERF+G     D  G +  +++PFGAGRRICPG+ LA+  L   + +++  F WK +  H +D+ +K   TV    PL A+
Sbjct:  367 RRHPPGHFLLPHSVTEDTVLGGYKVPKNGTINFMVAEIGRDPVEWEEPMAFKPERFMGEEEAVDLTGSRGIKMMPFGAGRRICPGIGLAMLHLEYYVANMVREFQWKEVQGHEVDLTEKLEFTVVMKHPLKAL 499          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: THAD_ARATH (Cytochrome P450 705A5 OS=Arabidopsis thaliana GN=CYP705A5 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 4.297e-18
Identity = 51/135 (37.78%), Postives = 76/135 (56.30%), Query Frame = -3
Query:  231 RLHXXXXXXXPRKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNA----DFKGQNF-ELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDNHNMDMEDKFGLTVQKAQPLHAVP 620
            RLH         K T   EI GF +P+  ++FVNV+AI RD   W++P  F PERFL S+     D K ++  + IPFG+GRR CPG  LA  ++  ++G ++  FDW +    ++M++   +T+  A PL   P
Sbjct:  372 RLHPPGPVVRTFKET--CEIKGFYIPEKTRLFVNVYAIMRDPDFWEDPEEFKPERFLASSRLGEEDEKREDMLKYIPFGSGRRACPGSHLAYTVVGSVIGMMVQHFDWIIKGEKINMKEGGTMTLTMAHPLKCTP 504          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C75A1_PINTA (Cytochrome P450 750A1 OS=Pinus taeda GN=CYP750A1 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.132e-17
Identity = 49/138 (35.51%), Postives = 76/138 (55.07%), Query Frame = -3
Query:  231 RLHXXXXXXXPRKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWD-NPHTFIPERFLG---SNADFKG--QNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL--DNHNMDMEDKFGLTVQKAQPLHAVP 620
            RL+       P ++ + V + G+ +PK   V +N+WAIGRD S W  +   F PERF+    +  D  G   +F ++PFGAGRR CPG  +AI  +   L  L+++FDW++  D   +DM++     + +  PL A P
Sbjct:  380 RLYPSLPLALPHESLEAVTVGGYYIPKKTMVIMNLWAIGRDPSVWGADASEFKPERFMQMEENGIDLSGGQSDFRMLPFGAGRRTCPGSAMAILTVEFTLAQLLHTFDWRVEGDPSELDMKEACATKMPRQTPLLAYP 517          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: KO1_ARATH (Ent-kaurene oxidase OS=Arabidopsis thaliana GN=KO1 PE=1 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 3.637e-17
Identity = 41/118 (34.75%), Postives = 65/118 (55.08%), Query Frame = -3
Query:  234 RKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDNHNMDMEDKFGLTVQKAQPLHAV 587
            R A +D +I G+ VP G+++ +N++    D+  W+ P  + PERFL           + + FGAG+R+C G   A  M  + +G L+  F+WKL +   +  D +GLT QK  PL A+
Sbjct:  386 RYAHEDTQIGGYHVPAGSEIAINIYGCNMDKKRWERPEDWWPERFLDDGKYETSDLHKTMAFGAGKRVCAGALQASLMAGIAIGRLVQEFEWKLRDGEEENVDTYGLTSQKLYPLMAI 503          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C78A1_MAIZE (Cytochrome P450 78A1 OS=Zea mays GN=CYP78A1 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 4.750e-17
Identity = 43/99 (43.43%), Postives = 58/99 (58.59%), Query Frame = -3
Query:  306 RKATKDVEIA-GFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFL----GSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL 587
            R AT DV +  G  VP G    VN+WAI  D + W +P  F PERFL    G++ D +G +  L PFGAGRR+CPG  L +  + L +  L+++F W L
Sbjct:  417 RLATADVPLCNGMVVPAGTTAMVNMWAITHDAAVWADPDAFAPERFLPSEGGADVDVRGVDLRLAPFGAGRRVCPGKNLGLTTVGLWVARLVHAFQWAL 515          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C99A2_ORYSJ (Cytochrome P450 99A2 OS=Oryza sativa subsp. japonica GN=CYP99A2 PE=2 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 1.805e-16
Identity = 38/87 (43.68%), Postives = 52/87 (59.77%), Query Frame = -3
Query:  306 EIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL 566
            +I G+ V +G +V +N WA+ R    WD+   F PERF    AD+KG  FE +PFG GRR CPG    + +L L++  L+  FDW L
Sbjct:  407 DIGGYEVVEGTRVVINSWAMARSPEYWDDAEEFKPERFEDGMADYKGSRFEYLPFGTGRRRCPGDTFGMVLLELIVARLLYYFDWSL 493          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C78A3_SOYBN (Cytochrome P450 78A3 OS=Glycine max GN=CYP78A3 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.805e-16
Identity = 46/120 (38.33%), Postives = 66/120 (55.00%), Query Frame = -3
Query:  243 RKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFL--GSNADFK--GQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDW-KLDNHNMDMEDKFGLTVQKAQPL 587
            R +  D  I G+ VP G    VN WAI RD   W +P  F+PERF+  G +A+F   G +  L PFG+GRR CPG  L    ++  + SL++ F+W   D   +D+ +   L+ + A PL
Sbjct:  395 RLSINDTTIDGYHVPAGTTAMVNTWAICRDPHVWKDPLEFMPERFVTAGGDAEFSILGSDPRLAPFGSGRRACPGKTLGWATVNFWVASLLHEFEWVPSDEKGVDLTEVLKLSSEMANPL 514          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C77A1_SOLME (Cytochrome P450 77A1 (Fragment) OS=Solanum melongena GN=CYP77A1 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 6.860e-16
Identity = 46/133 (34.59%), Postives = 68/133 (51.13%), Query Frame = -3
Query:  237 RLHXXXXXXXPRKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGS--NADFKG-QNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL--DNHNMDMEDKFGLTVQKAQPLHA 620
            R H           T+ V++AG+ +P    V   V  I  D + W +P  F P+RFL    +AD  G +  +++PFG GRRICPGL +A   ++LML  ++  F+W     N+ +D  +K   TV    PL A
Sbjct:  361 RKHPPTYFTLTHSVTEPVKLAGYDIPMDTNVEFFVHGISHDPNVWSDPEKFDPDRFLSGREDADITGVKEVKMMPFGVGRRICPGLGMATVHVNLMLARMVQEFEWFAYPGNNKVDFSEKLEFTVVMKNPLRA 493          
The following BLAST results are available for this feature:
BLAST of CB305039 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 223
Match NameE-valueIdentityDescription
C81E1_GLYEC1.929e-1840.77Isoflavone 2'-hydroxylase OS=Glycyrrhiza echinata ... [more]
C78AB_ORYSJ2.519e-1838.71Cytochrome P450 78A11 OS=Oryza sativa subsp. japon... [more]
C89A2_ARATH3.290e-1836.84Cytochrome P450 89A2 OS=Arabidopsis thaliana GN=CY... [more]
THAD_ARATH4.297e-1837.78Cytochrome P450 705A5 OS=Arabidopsis thaliana GN=C... [more]
C75A1_PINTA2.132e-1735.51Cytochrome P450 750A1 OS=Pinus taeda GN=CYP750A1 P... [more]
KO1_ARATH3.637e-1734.75Ent-kaurene oxidase OS=Arabidopsis thaliana GN=KO1... [more]
C78A1_MAIZE4.750e-1743.43Cytochrome P450 78A1 OS=Zea mays GN=CYP78A1 PE=2 S... [more]
C99A2_ORYSJ1.805e-1643.68Cytochrome P450 99A2 OS=Oryza sativa subsp. japoni... [more]
C78A3_SOYBN1.805e-1638.33Cytochrome P450 78A3 OS=Glycine max GN=CYP78A3 PE=... [more]
C77A1_SOLME6.860e-1634.59Cytochrome P450 77A1 (Fragment) OS=Solanum melonge... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0003_IVaR_C02 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0003_IVaR_C02 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB305039 ID=CB305039; Name=CB305039; organism=Citrus sinensis; type=EST; length=622bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGCTATTAAATNNNATGACT
TTATAGTTTATTGAAGATTAACTCTGTTAAGTTGCGTGTCTACATAAAAA
AAAATAAGAGCGCCCACACCTGAGAATGATTACACACACATATAACTAAC
CACCAAGCGCTTTATATAGTGGCTACCACCAAGCGCTTTATATATTGGCT
ACGAACTATAGTATAGAACTAGATGGCACCAGGGACAGCATGAAGGGGTT
GAGCCTTCTGTACGGTGAGGCCAAATTTATCTTCCATGTCCATGTTGTGG
TTATCAAGCTTCCAATCAAAAGAGTTAATAAGTGAACCCAACATTAGATG
TAACATTCTGATTGCCAATGGTAAACCAGGACAAATTCGTCGTCCAGCTC
CGAAGGGAATTAGCTCAAAATTCTGGCCTTTGAAATCAGCATTTGACCCT
AAGAACCTTTCGGGAATAAAAGTGTGAGGGTTGTCCCATGTGCTTTCATC
TCTGCCAATAGCCCATACATTGACAAAAACTTGTGCACCTTTTGGCACTG
TGAAGCCTGCAATTTCAACATCTTTTGTGGCTTTGCGGGGAAGTAATAAG
GGAGCTGCAGGGTGCAATCTCA
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