CB305039

Overview
NameCB305039
Unique NameCB305039
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length622
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: TCMO_POPKI (Trans-cinnamate 4-monooxygenase OS=Populus kitakamiensis GN=CYP73A16 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.996e-15
Identity = 35/88 (39.77%), Postives = 55/88 (62.50%), Query Frame = -3
Query:  315 DVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFL--GSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFD 572
            D ++ GF +P  +++ VN W +  + + W NP  F PERFL  G+  +  G +F  +PFG GRR CPG+ LA+ +L + LG L+ +F+
Sbjct:  382 DAKLGGFDIPAESKILVNAWWLANNPAHWKNPEEFRPERFLEEGAKVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFE 469          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C77A3_SOYBN (Cytochrome P450 77A3 OS=Glycine max GN=CYP77A3 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.404e-15
Identity = 47/133 (35.34%), Postives = 63/133 (47.37%), Query Frame = -3
Query:  237 RLHXXXXXXXPRKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFL--GSNADFKG-QNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL--DNHNMDMEDKFGLTVQKAQPLHA 620
            R H           T+   + G+ +P  A V V   AI  D   W NP  F PERF+  G  AD  G    +++PFG GRRICPGL +A   +HLM+  ++  F+W        MD   K+  TV   + L A
Sbjct:  369 RKHPPTHFVLTHAVTEPTTLGGYDIPIDANVEVYTPAIAEDPKNWLNPEKFDPERFISGGEEADITGVTGVKMMPFGVGRRICPGLAMATVHIHLMMARMVQEFEWGAYPPEKKMDFTGKWEFTVVMKESLRA 501          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C79A2_ARATH (Phenylalanine N-hydroxylase OS=Arabidopsis thaliana GN=CYP79A2 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 4.446e-15
Identity = 40/105 (38.10%), Postives = 56/105 (53.33%), Query Frame = -3
Query:  312 RLHXXXXXXXPRKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSN--ADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDW 620
            RLH       P  +T D  + G+ +PKG+ V ++   IGR+ S WD PH F PER L +N   D    +  +I F AGRR C G+ +   M +++L  LI  F W
Sbjct:  386 RLHPVAPFNLPHMSTTDTVVDGYFIPKGSHVLISRMGIGRNPSVWDKPHKFDPERHLSTNTCVDLNESDLNIISFSAGRRGCMGVDIGSAMTYMLLARLIQGFTW 490          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: TCMO_POPTM (Trans-cinnamate 4-monooxygenase OS=Populus tremuloides GN=CYP73A13 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 7.584e-15
Identity = 35/88 (39.77%), Postives = 54/88 (61.36%), Query Frame = -3
Query:  315 DVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNA--DFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFD 572
            D ++ GF +P  +++ VN W +  + + W NP  F PERFL   A  +  G +F  +PFG GRR CPG+ LA+ +L + LG L+ +F+
Sbjct:  382 DAKLGGFDIPAESKILVNAWWLANNPAHWKNPEEFRPERFLEEEAKVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFE 469          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: TCMO_PETCR (Trans-cinnamate 4-monooxygenase OS=Petroselinum crispum GN=CYP73A10 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 9.905e-15
Identity = 34/88 (38.64%), Postives = 57/88 (64.77%), Query Frame = -3
Query:  315 DVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLG--SNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFD 572
            D ++AG+ +P  +++ VN W +  + + W+ P  F PERFL   S  +  G +F+ IPFG GRR CPG+ LA+ +L +++G L+ +F+
Sbjct:  383 DAKLAGYDIPAESKILVNAWWLANNPAHWNKPDEFRPERFLEEESKVEANGNDFKYIPFGVGRRSCPGIILALPILGIVIGRLVQNFE 470          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: TCMO_CICAR (Trans-cinnamate 4-monooxygenase OS=Cicer arietinum GN=CYP73A19 PE=2 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 1.690e-14
Identity = 34/88 (38.64%), Postives = 55/88 (62.50%), Query Frame = -3
Query:  315 DVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLG--SNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFD 572
            D +++GF +P  +++ VN W +  + + W  P  F PERFL   S+ +  G +F  +PFG GRR CPG+ LA+ +L + LG L+ +F+
Sbjct:  381 DAKLSGFDIPAESKILVNAWWLANNPAQWKKPEEFRPERFLEEESHVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFE 468          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: CP17A_RANDY (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Rana dybowskii GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.690e-14
Identity = 41/111 (36.94%), Postives = 63/111 (56.76%), Query Frame = -3
Query:  258 ATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNAD-FKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDNHN--MDMEDKFGLTVQ 581
            A K+  I  +T+PK A+V +N+W++  DE  W NPH F P+RFL  N +     +   +PFGAG R+C G  LA   + L L  ++  F  ++   +   D+E KFG+ +Q
Sbjct:  388 ALKESSIGEYTIPKEARVVINLWSLHHDEKEWVNPHLFSPDRFLDENGNRVYSPSPSFLPFGAGIRVCLGEALAKMEVFLFLSWILQRFTLEVPEGDPLPDLEGKFGVVIQ 498          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: TCMO_RUTGR (Trans-cinnamate 4-monooxygenase OS=Ruta graveolens GN=CYP73A2 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.882e-14
Identity = 33/88 (37.50%), Postives = 55/88 (62.50%), Query Frame = -3
Query:  315 DVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLG--SNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFD 572
            D ++AG+ +P  +++ VN W +  + + W +P  F PERFL   S  +  G +F  IPFG GRR CPG+ LA+ +L + +G ++ +F+
Sbjct:  382 DAKLAGYDIPAESKILVNAWWLANNPAHWKDPQVFRPERFLEEESGVEANGNDFRYIPFGVGRRSCPGIILALPILGITIGRMVQNFE 469          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: TCMO_GLYEC (Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza echinata GN=CYP73A14 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.764e-14
Identity = 33/88 (37.50%), Postives = 54/88 (61.36%), Query Frame = -3
Query:  315 DVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLG--SNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFD 572
            D ++ G+ +P  +++ VN W +  + + W  P  F PERFL   S+ +  G +F  +PFG GRR CPG+ LA+ +L + LG L+ +F+
Sbjct:  382 DAKLGGYDIPAESKILVNAWWLANNPANWKRPEEFRPERFLEEESHVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFE 469          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: TCMO_PEA (Trans-cinnamate 4-monooxygenase OS=Pisum sativum GN=CYP73A9 PE=2 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 4.916e-14
Identity = 33/88 (37.50%), Postives = 53/88 (60.23%), Query Frame = -3
Query:  315 DVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNA--DFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFD 572
            D ++ GF +P  +++ VN W +  + + W  P  F PERFL   A  +  G +F  +PFG GRR CPG+ LA+ +L + +G L+ +F+
Sbjct:  382 DAKLGGFDIPAESKILVNAWWLANNPALWKKPEEFRPERFLEEEAHVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFE 469          
The following BLAST results are available for this feature:
BLAST of CB305039 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 223
Match NameE-valueIdentityDescription
TCMO_POPKI1.996e-1539.77Trans-cinnamate 4-monooxygenase OS=Populus kitakam... [more]
C77A3_SOYBN3.404e-1535.34Cytochrome P450 77A3 OS=Glycine max GN=CYP77A3 PE=... [more]
C79A2_ARATH4.446e-1538.10Phenylalanine N-hydroxylase OS=Arabidopsis thalian... [more]
TCMO_POPTM7.584e-1539.77Trans-cinnamate 4-monooxygenase OS=Populus tremulo... [more]
TCMO_PETCR9.905e-1538.64Trans-cinnamate 4-monooxygenase OS=Petroselinum cr... [more]
TCMO_CICAR1.690e-1438.64Trans-cinnamate 4-monooxygenase OS=Cicer arietinum... [more]
CP17A_RANDY1.690e-1436.94Steroid 17-alpha-hydroxylase/17,20 lyase OS=Rana d... [more]
TCMO_RUTGR2.882e-1437.50Trans-cinnamate 4-monooxygenase OS=Ruta graveolens... [more]
TCMO_GLYEC3.764e-1437.50Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza ech... [more]
TCMO_PEA4.916e-1437.50Trans-cinnamate 4-monooxygenase OS=Pisum sativum G... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0003_IVaR_C02 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0003_IVaR_C02 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB305039 ID=CB305039; Name=CB305039; organism=Citrus sinensis; type=EST; length=622bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGCTATTAAATNNNATGACT
TTATAGTTTATTGAAGATTAACTCTGTTAAGTTGCGTGTCTACATAAAAA
AAAATAAGAGCGCCCACACCTGAGAATGATTACACACACATATAACTAAC
CACCAAGCGCTTTATATAGTGGCTACCACCAAGCGCTTTATATATTGGCT
ACGAACTATAGTATAGAACTAGATGGCACCAGGGACAGCATGAAGGGGTT
GAGCCTTCTGTACGGTGAGGCCAAATTTATCTTCCATGTCCATGTTGTGG
TTATCAAGCTTCCAATCAAAAGAGTTAATAAGTGAACCCAACATTAGATG
TAACATTCTGATTGCCAATGGTAAACCAGGACAAATTCGTCGTCCAGCTC
CGAAGGGAATTAGCTCAAAATTCTGGCCTTTGAAATCAGCATTTGACCCT
AAGAACCTTTCGGGAATAAAAGTGTGAGGGTTGTCCCATGTGCTTTCATC
TCTGCCAATAGCCCATACATTGACAAAAACTTGTGCACCTTTTGGCACTG
TGAAGCCTGCAATTTCAACATCTTTTGTGGCTTTGCGGGGAAGTAATAAG
GGAGCTGCAGGGTGCAATCTCA
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