CB305039

Overview
NameCB305039
Unique NameCB305039
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length622
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11430 contig Csv1_Contig11430:1424..2045. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C71B1_THLAR (Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.205e-28
Identity = 57/123 (46.34%), Postives = 82/123 (66.67%), Query Frame = -3
Query:  231 RKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAQPLHAVP 587
            R A KD++IAG+ VP+   + VN+WA+    S W +P TF PERF+ +  DFKG NFEL+PFG+GRR+CPG+ + + ++HL L +L+  FDWKL N      + +E+ +GL   K  PL A+P
Sbjct:  368 RVAAKDLKIAGYDVPEKTWIHVNMWAVHMSPSIWKDPETFNPERFIDNQTDFKGLNFELLPFGSGRRMCPGMGMGLAVVHLTLINLLYRFDWKLPNGMKAEELSIEENYGLICVKKLPLEAIP 490          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C71A6_NEPRA (Cytochrome P450 71A6 (Fragment) OS=Nepeta racemosa GN=CYP71A6 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.574e-28
Identity = 60/134 (44.78%), Postives = 85/134 (63.43%), Query Frame = -3
Query:  231 RLHXXXXXXXPRKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAQPLHAVP 620
            RLH       PR++T+D ++ G+ V  G +V +N WAIGRD S W+   TF+PERFL ++ D++G +FELIPFG+GRR CPG   A  +  L L +L++ FD+KL N     ++DM +  G T+ K  PL  VP
Sbjct:  371 RLHAPVPLLVPRESTRDTKVLGYDVASGTRVLINCWAIGRDSSVWEESETFLPERFLETSIDYRGMHFELIPFGSGRRGCPGATFAAAIDELALATLVHKFDFKLPNGVRVEDLDMSEGSGFTIHKKFPLLVVP 504          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C80A1_BERST (Berbamunine synthase OS=Berberis stolonifera GN=CYP80A1 PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 2.685e-28
Identity = 59/134 (44.03%), Postives = 87/134 (64.93%), Query Frame = -3
Query:  231 RLHXXXXXXXPRKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL----DNHNMDMEDKFGLTVQKAQPLHAVP 620
            RL+       P +  +  ++ G+T+PKG  V VN  AIGRD   W +P  F PERFL S+ ++ G+ F+ IPFG+GRRICPG PLA+R++ L+L SL+++F W+L     N  +DME+ F L++  A+PL  +P
Sbjct:  350 RLYPPISIMIPHRCMETCQVMGYTIPKGMDVHVNAHAIGRDPKDWKDPLKFQPERFLDSDIEYNGKQFQFIPFGSGRRICPGRPLAVRIIPLVLASLVHAFGWELPDGVPNEKLDMEELFTLSLCMAKPLRVIP 483          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C75A5_EUSGR (Flavonoid 3',5'-hydroxylase OS=Eustoma grandiflorum GN=CYP75A5 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.507e-28
Identity = 63/134 (47.01%), Postives = 90/134 (67.16%), Query Frame = -3
Query:  234 RLHXXXXXXXPRKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFL---GSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDNH--NMDMEDKFGLTVQKAQPLHAV 620
            R H       PR A++  E+ G  +PKG ++ VN+WAIGRD S W+NP+ F P+RFL    +  D +G +FELIPFGAGRRIC G  L I ++  +LG+L++SFDW+L +    ++M++ FGL +QKA PL A+
Sbjct:  365 RKHPSTPLNLPRIASQACEVNGHYIPKGTRLSVNIWAIGRDPSLWENPNEFNPDRFLERKNAKIDPRGNDFELIPFGAGRRICAGTRLGILLVEYILGTLVHSFDWELPSSVIELNMDEPFGLALQKAVPLAAM 498          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C75A4_GENTR (Flavonoid 3',5'-hydroxylase OS=Gentiana triflora GN=CYP75A4 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 5.981e-28
Identity = 63/118 (53.39%), Postives = 86/118 (72.88%), Query Frame = -3
Query:  234 VEIAGFTVPKGAQVFVNVWAIGRDESTW-DNPHTFIPERFL-GSNA--DFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL--DNHNMDMEDKFGLTVQKAQPLHAV 569
            V++ G+ +PKG ++ VN+WAIGRD S W DNP+ F PERFL G NA  D +G +FELIPFGAGRRIC G  + I ++  +LG+L++SFDWKL      ++M++ FGL +QKA PL A+
Sbjct:  387 VDVNGYYIPKGTRLNVNIWAIGRDPSVWGDNPNEFDPERFLYGRNAKIDPRGNHFELIPFGAGRRICAGTRMGILLVEYILGTLVHSFDWKLGFSEDELNMDETFGLALQKAVPLAAM 504          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C75A3_PETHY (Flavonoid 3',5'-hydroxylase 2 OS=Petunia hybrida GN=CYP75A3 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 5.981e-28
Identity = 63/134 (47.01%), Postives = 86/134 (64.18%), Query Frame = -3
Query:  234 RLHXXXXXXXPRKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLG---SNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDNH--NMDMEDKFGLTVQKAQPLHAV 620
            R H       PR + +   + G+ +PK  ++ VN+WAIGRD   W+NP  F PERFL    S  D +G +FELIPFGAGRRIC G  + I M+  +LG+L++SFDWKL +    ++ME+ FGL +QKA PL A+
Sbjct:  361 RKHPSTPLNLPRISNEPCIVDGYYIPKNTRLSVNIWAIGRDPEVWENPLEFYPERFLSGRNSKIDPRGNDFELIPFGAGRRICAGTRMGIVMVEYILGTLVHSFDWKLPSEVIELNMEEAFGLALQKAVPLEAM 494          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C71BU_ARATH (Cytochrome P450 71B31 OS=Arabidopsis thaliana GN=CYP71B31 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 7.812e-28
Identity = 61/134 (45.52%), Postives = 84/134 (62.69%), Query Frame = -3
Query:  231 RLHXXXXXXXPRKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAQPLHAVP 620
            RLH       PR+   D+EI G+ +PK A V +N +AIGRD   W NP  F PERFL ++ ++KGQ++EL+PFGAGRR CPG+ L I +L L L +++  FDW L +     ++DME+   L + K  PL  VP
Sbjct:  362 RLHPPAPLLLPRETMSDIEIQGYHIPKNAHVKINTYAIGRDPKRWTNPEEFNPERFLNTSINYKGQHYELLPFGAGRRNCPGMTLGITILELGLLNILYYFDWSLPSGMTIKDIDMEEDGALNIAKKVPLQLVP 495          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C71B2_ARATH (Cytochrome P450 71B2 OS=Arabidopsis thaliana GN=CYP71B2 PE=2 SV=2)

HSP 1 Score: 123.635 bits (309), Expect = 7.812e-28
Identity = 57/134 (42.54%), Postives = 85/134 (63.43%), Query Frame = -3
Query:  231 RLHXXXXXXXPRKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAQPLHAVP 620
            RLH       PR+    ++I G+ +P   Q+ +NVW IGRD   W++P  F PERF  S+ DF+GQ+F+L+PFG+GRRICPG+P+AI  + L L +L+  FDW + +     ++DME+   +++ K  PL  VP
Sbjct:  365 RLHPALPFVVPRETMSHIKIQGYDIPPKTQIQLNVWTIGRDPKRWNDPEEFNPERFANSSVDFRGQHFDLLPFGSGRRICPGMPMAIASVELALMNLLYYFDWSMPDGTKGEDIDMEEAGNISIVKKIPLQLVP 498          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C75A1_PETHY (Flavonoid 3',5'-hydroxylase 1 OS=Petunia hybrida GN=CYP75A1 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.020e-27
Identity = 63/134 (47.01%), Postives = 86/134 (64.18%), Query Frame = -3
Query:  234 RLHXXXXXXXPRKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLG---SNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDNH--NMDMEDKFGLTVQKAQPLHAV 620
            R H       PR + +   + G+ +PK  ++ VN+WAIGRD   W+NP  F PERFL    S  D +G +FELIPFGAGRRIC G  + I M+  +LG+L++SFDWKL +    ++ME+ FGL +QKA PL A+
Sbjct:  361 RKHPSTPLNLPRISNEPCIVDGYYIPKNTRLSVNIWAIGRDPQVWENPLEFNPERFLSGRNSKIDPRGNDFELIPFGAGRRICAGTRMGIVMVEYILGTLVHSFDWKLPSEVIELNMEEAFGLALQKAVPLEAM 494          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C71B8_ARATH (Cytochrome P450 71B8 OS=Arabidopsis thaliana GN=CYP71B8 PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.020e-27
Identity = 59/134 (44.03%), Postives = 84/134 (62.69%), Query Frame = -3
Query:  231 RLHXXXXXXXPRKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAQPLHAVP 620
            RLH       PR+   D+EI G+ +PK A + ++ +AIGRD   W NP  F PERF  ++ ++KGQ++EL+PFGAGRR CPG+ L I +L L L +++  FDW L N     ++DME+   LT+ K  PL  +P
Sbjct:  364 RLHPPGPFLLPRQVMSDIEIQGYHIPKNAHIKISTYAIGRDPKCWTNPEEFNPERFANTSINYKGQHYELLPFGAGRRSCPGMTLGITILELGLLNILYYFDWSLPNGMTIKDIDMEEDGALTIAKKVPLELIP 497          
The following BLAST results are available for this feature:
BLAST of CB305039 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 223
Match NameE-valueIdentityDescription
C71B1_THLAR1.205e-2846.34Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1... [more]
C71A6_NEPRA1.574e-2844.78Cytochrome P450 71A6 (Fragment) OS=Nepeta racemosa... [more]
C80A1_BERST2.685e-2844.03Berbamunine synthase OS=Berberis stolonifera GN=CY... [more]
C75A5_EUSGR3.507e-2847.01Flavonoid 3',5'-hydroxylase OS=Eustoma grandifloru... [more]
C75A4_GENTR5.981e-2853.39Flavonoid 3',5'-hydroxylase OS=Gentiana triflora G... [more]
C75A3_PETHY5.981e-2847.01Flavonoid 3',5'-hydroxylase 2 OS=Petunia hybrida G... [more]
C71BU_ARATH7.812e-2845.52Cytochrome P450 71B31 OS=Arabidopsis thaliana GN=C... [more]
C71B2_ARATH7.812e-2842.54Cytochrome P450 71B2 OS=Arabidopsis thaliana GN=CY... [more]
C75A1_PETHY1.020e-2747.01Flavonoid 3',5'-hydroxylase 1 OS=Petunia hybrida G... [more]
C71B8_ARATH1.020e-2744.03Cytochrome P450 71B8 OS=Arabidopsis thaliana GN=CY... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0003_IVaR_C02 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0003_IVaR_C02 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB305039 ID=CB305039; Name=CB305039; organism=Citrus sinensis; type=EST; length=622bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGCTATTAAATNNNATGACT
TTATAGTTTATTGAAGATTAACTCTGTTAAGTTGCGTGTCTACATAAAAA
AAAATAAGAGCGCCCACACCTGAGAATGATTACACACACATATAACTAAC
CACCAAGCGCTTTATATAGTGGCTACCACCAAGCGCTTTATATATTGGCT
ACGAACTATAGTATAGAACTAGATGGCACCAGGGACAGCATGAAGGGGTT
GAGCCTTCTGTACGGTGAGGCCAAATTTATCTTCCATGTCCATGTTGTGG
TTATCAAGCTTCCAATCAAAAGAGTTAATAAGTGAACCCAACATTAGATG
TAACATTCTGATTGCCAATGGTAAACCAGGACAAATTCGTCGTCCAGCTC
CGAAGGGAATTAGCTCAAAATTCTGGCCTTTGAAATCAGCATTTGACCCT
AAGAACCTTTCGGGAATAAAAGTGTGAGGGTTGTCCCATGTGCTTTCATC
TCTGCCAATAGCCCATACATTGACAAAAACTTGTGCACCTTTTGGCACTG
TGAAGCCTGCAATTTCAACATCTTTTGTGGCTTTGCGGGGAAGTAATAAG
GGAGCTGCAGGGTGCAATCTCA
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