CB305039

Overview
NameCB305039
Unique NameCB305039
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length622
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11430 contig Csv1_Contig11430:1424..2045. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C71B4_ARATH (Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CYP71B4 PE=2 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 1.020e-27
Identity = 59/132 (44.70%), Postives = 82/132 (62.12%), Query Frame = -3
Query:  231 RLHXXXXXXXPRKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL--DNHNMDMEDKFGLTVQKAQPLHAVP 620
            RLH       PR+   D++I G+ +P+   + VN W+IGRD  +W NP  F PERF+    D+KG +FEL+PFG+GRRICPG+ +AI  + L L +L+  FDW +     +MDME+   LTV K  PL  +P
Sbjct:  367 RLHPAAPLLLPRETMADIKIQGYDIPQKRALLVNAWSIGRDPESWKNPEEFNPERFIDCPVDYKGHSFELLPFGSGRRICPGIAMAIATIELGLLNLLYFFDWNMPEKKKDMDMEEAGDLTVDKKVPLELLP 498          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C75A6_CAMME (Flavonoid 3',5'-hydroxylase OS=Campanula medium GN=CYP75A6 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.333e-27
Identity = 61/134 (45.52%), Postives = 85/134 (63.43%), Query Frame = -3
Query:  234 RLHXXXXXXXPRKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLG---SNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDNH--NMDMEDKFGLTVQKAQPLHAV 620
            R H       PR +T+  E+ GF +PK  ++ VN+WAIGRD   W+NP  F PERFL    +  D +G +FELIPFGAGRRIC G  +    +  +LG+L++SFDWKL +    ++ME+ FG+ +QK  PL A+
Sbjct:  378 RKHPSTPLNLPRISTEACEVDGFHIPKNTRLIVNIWAIGRDPKVWENPLDFTPERFLSEKHAKIDPRGNHFELIPFGAGRRICAGARMGAASVEYILGTLVHSFDWKLPDGVVEVNMEESFGIALQKKVPLSAI 511          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C71BZ_ARATH (Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=CYP71B38 PE=2 SV=2)

HSP 1 Score: 122.865 bits (307), Expect = 1.333e-27
Identity = 61/130 (46.92%), Postives = 79/130 (60.77%), Query Frame = -3
Query:  243 RLHXXXXXXXPRKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAQPL 620
            RLH       PR    D++I G+ +PK   + +N +AIGRD   W  P  FIPERFL S  D+KGQ+FEL+PFGAGRRICPG+   I M+ L L +L+  FDW L N     ++DME+  G  + K  PL
Sbjct:  362 RLHPPAPLLLPRLTMSDIKIQGYNIPKNTMIQINTYAIGRDPKYWKQPGEFIPERFLDSPIDYKGQHFELLPFGAGRRICPGMATGITMVELGLLNLLYFFDWSLPNGMTIEDIDMEEDEGFAIAKKVPL 491          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C98A1_SORBI (Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.740e-27
Identity = 59/133 (44.36%), Postives = 80/133 (60.15%), Query Frame = -3
Query:  234 RLHXXXXXXXPRKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAQPLHAV 620
            RLH       P KA+ +V+I G+ +PKGA V VNVWA+ RD   W NP  + PERFL  N D KG +F ++PFGAGRR+CPG  L I ++  M+G L++ F+W L       +++M +  GL      PL AV
Sbjct:  362 RLHPPTPLMLPHKASTNVKIGGYDIPKGANVMVNVWAVARDPKVWSNPLEYRPERFLEENIDIKGSDFRVLPFGAGRRVCPGAQLGINLVASMIGHLLHHFEWSLPEGTRPEDVNMMESPGLVTFMGTPLQAV 494          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: F3PH_PETHY (Flavonoid 3'-monooxygenase OS=Petunia hybrida GN=CYP75B2 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.273e-27
Identity = 63/138 (45.65%), Postives = 89/138 (64.49%), Query Frame = -3
Query:  231 RLHXXXXXXXPRKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSN----ADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAQPLHAVP 620
            RLH       PR A++  EI G+ +PKG+ + +NVWAI RD + W +P  F PERFL        D +G +FE+IPFGAGRRIC G+ L IRM+ LM+ +LI++F+W L +      ++ME+ +GLT+Q+A PL   P
Sbjct:  364 RLHPSTPLSLPRIASESCEINGYFIPKGSTLLLNVWAIARDPNAWADPLEFRPERFLPGGEKPKVDVRGNDFEVIPFGAGRRICAGMNLGIRMVQLMIATLIHAFNWDLVSGQLPEMLNMEEAYGLTLQRADPLVVHP 501          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C75A7_EUSGR (Flavonoid 3',5'-hydroxylase OS=Eustoma grandiflorum GN=CYP75A7 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.273e-27
Identity = 62/134 (46.27%), Postives = 89/134 (66.42%), Query Frame = -3
Query:  234 RLHXXXXXXXPRKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFL---GSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDNH--NMDMEDKFGLTVQKAQPLHAV 620
            R H       PR A++  E+ G  +PKG ++ VN+WAIGRD S W+NP+ F P+RFL    +  D +G +FELIPFGAGRRIC G  L I ++  +LG+L++SF W+L +    ++M++ FGL +QKA PL A+
Sbjct:  365 RKHPSTPLNLPRIASQACEVNGHYIPKGTRLSVNIWAIGRDPSVWENPNEFNPDRFLERKNAKIDPRGNDFELIPFGAGRRICAGTRLGILLVEYILGTLVHSFVWELPSSVIELNMDESFGLALQKAVPLAAM 498          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C71DC_CATRO (Tabersonine 16-hydroxylase (Fragment) OS=Catharanthus roseus GN=CYP71D12 PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.969e-27
Identity = 55/130 (42.31%), Postives = 80/130 (61.54%), Query Frame = -3
Query:  231 RLHXXXXXXXPRKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDNHNMDMEDKFGLTVQKAQPLHAVP 620
            RLH       PR+  +  +I G+T+P  ++V VN WAIGRD + W  P  F P+RFL S  DFKG +FE +PFG GRRICPG+  A+  + L L  L+  FDW+ +   ++M++  G+TV++   L+  P
Sbjct:  357 RLHPPVPLLLPRECREQCKIKGYTIPSKSRVIVNAWAIGRDPNYWIEPEKFNPDRFLESKVDFKGNSFEYLPFGGGRRICPGITFALANIELPLAQLLFHFDWQSNTEKLNMKESRGVTVRREDDLYLTP 486          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C93A3_SOYBN (Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 6.613e-27
Identity = 55/124 (44.35%), Postives = 85/124 (68.55%), Query Frame = -3
Query:  231 RKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLG---SNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL--DNHNMDMEDKFGLTVQKAQPLHAVP 587
            R++++   + G+ +P   ++FVNVWAIGRD + W+NP  F PERF+    S  D +GQ++ L+PFG+GRR CPG  LA++++H+ L  LI  F WK+  DN  ++ME+K G+T+ +A P+  VP
Sbjct:  377 RESSRRAVVCGYDIPAKTRLFVNVWAIGRDPNHWENPLEFRPERFVENGKSQLDVRGQHYHLLPFGSGRRACPGTSLALQVVHVNLAVLIQCFQWKVDCDNGKVNMEEKAGITLPRAHPIICVP 500          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: F3PH_ARATH (Flavonoid 3'-monooxygenase OS=Arabidopsis thaliana GN=CYP75B1 PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 8.637e-27
Identity = 61/138 (44.20%), Postives = 82/138 (59.42%), Query Frame = -3
Query:  231 RLHXXXXXXXPRKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLG----SNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAQPLHAVP 620
            RLH       P  A++  EI G+ +PKG+ +  N+WAI RD   W +P  F PERFL     S  D KG +FELIPFGAGRRIC GL L +R +  +  +L+  FDW+L        ++ME+ +GLT+Q+A PL   P
Sbjct:  362 RLHPPTPLSLPHIASESCEINGYHIPKGSTLLTNIWAIARDPDQWSDPLAFKPERFLPGGEKSGVDVKGSDFELIPFGAGRRICAGLSLGLRTIQFLTATLVQGFDWELAGGVTPEKLNMEESYGLTLQRAVPLVVHP 499          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C71AN_ARATH (Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=CYP71A23 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 8.637e-27
Identity = 54/133 (40.60%), Postives = 87/133 (65.41%), Query Frame = -3
Query:  225 RLHXXXXXXXPRKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWD-NPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDNHNMDMEDKFGLTVQKAQPLHAVPGA 620
            RLH       P ++T+DV +    +P G QV VN+WA+GR+ +TW  + + F PER L S +DF+GQ+FELIPFGAGRR+CPG+  A+ +  ++L +L++ FDW+  +   D+ +  G  +++  PL+ +P +
Sbjct:  349 RLHPPVPLMVPHQSTQDVRLRDNHIPAGTQVIVNLWAVGREAATWGPDANEFRPERHLESPSDFRGQDFELIPFGAGRRMCPGISFAVVLNEVVLANLVHGFDWQSIDDETDVAESIGSVIRRMHPLYVIPSS 481          
The following BLAST results are available for this feature:
BLAST of CB305039 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 223
Match NameE-valueIdentityDescription
C71B4_ARATH1.020e-2744.70Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CY... [more]
C75A6_CAMME1.333e-2745.52Flavonoid 3',5'-hydroxylase OS=Campanula medium GN... [more]
C71BZ_ARATH1.333e-2746.92Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=C... [more]
C98A1_SORBI1.740e-2744.36Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1... [more]
F3PH_PETHY2.273e-2745.65Flavonoid 3'-monooxygenase OS=Petunia hybrida GN=C... [more]
C75A7_EUSGR2.273e-2746.27Flavonoid 3',5'-hydroxylase OS=Eustoma grandifloru... [more]
C71DC_CATRO2.969e-2742.31Tabersonine 16-hydroxylase (Fragment) OS=Catharant... [more]
C93A3_SOYBN6.613e-2744.35Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=... [more]
F3PH_ARATH8.637e-2744.20Flavonoid 3'-monooxygenase OS=Arabidopsis thaliana... [more]
C71AN_ARATH8.637e-2740.60Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0003_IVaR_C02 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0003_IVaR_C02 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB305039 ID=CB305039; Name=CB305039; organism=Citrus sinensis; type=EST; length=622bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGCTATTAAATNNNATGACT
TTATAGTTTATTGAAGATTAACTCTGTTAAGTTGCGTGTCTACATAAAAA
AAAATAAGAGCGCCCACACCTGAGAATGATTACACACACATATAACTAAC
CACCAAGCGCTTTATATAGTGGCTACCACCAAGCGCTTTATATATTGGCT
ACGAACTATAGTATAGAACTAGATGGCACCAGGGACAGCATGAAGGGGTT
GAGCCTTCTGTACGGTGAGGCCAAATTTATCTTCCATGTCCATGTTGTGG
TTATCAAGCTTCCAATCAAAAGAGTTAATAAGTGAACCCAACATTAGATG
TAACATTCTGATTGCCAATGGTAAACCAGGACAAATTCGTCGTCCAGCTC
CGAAGGGAATTAGCTCAAAATTCTGGCCTTTGAAATCAGCATTTGACCCT
AAGAACCTTTCGGGAATAAAAGTGTGAGGGTTGTCCCATGTGCTTTCATC
TCTGCCAATAGCCCATACATTGACAAAAACTTGTGCACCTTTTGGCACTG
TGAAGCCTGCAATTTCAACATCTTTTGTGGCTTTGCGGGGAAGTAATAAG
GGAGCTGCAGGGTGCAATCTCA
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