CB305039

Overview
NameCB305039
Unique NameCB305039
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length622
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11430 contig Csv1_Contig11430:1424..2045. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C71A1_PERAE (Cytochrome P450 71A1 OS=Persea americana GN=CYP71A1 PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 9.550e-26
Identity = 51/105 (48.57%), Postives = 73/105 (69.52%), Query Frame = -3
Query:  306 RLHXXXXXXXPRKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL 620
            RLH       PR++T+DV I G+ +P   +VF+N WAIGRD  +W+N   F+PERF+ ++ DFKGQ+F+LIPFGAGRR CPG+   I  + + L +L+  F+W+L
Sbjct:  364 RLHPVAPLLVPRESTRDVVIRGYHIPAKTRVFINAWAIGRDPKSWENAEEFLPERFVNNSVDFKGQDFQLIPFGAGRRGCPGIAFGISSVEISLANLLYWFNWEL 468          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C71B9_ARATH (Cytochrome P450 71B9 OS=Arabidopsis thaliana GN=CYP71B9 PE=2 SV=3)

HSP 1 Score: 116.316 bits (290), Expect = 1.247e-25
Identity = 57/134 (42.54%), Postives = 81/134 (60.45%), Query Frame = -3
Query:  231 RLHXXXXXXXPRKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAQPLHAVP 620
            RLH       PR+   + EI G+ +     ++VNVWAIGRD  +W +   F PERF+ +N D KGQNFEL+PFG+GRRICPG+ +   M+   L +++  FDW++ +     ++DME+  GL V K   L  VP
Sbjct:  361 RLHPPVPLLLPREVMSEFEINGYKIQPKTLLYVNVWAIGRDPDSWKDADMFYPERFMDNNIDAKGQNFELLPFGSGRRICPGMYMGTTMVEFGLANMLYQFDWEVPDGMVVEDIDMEESPGLAVGKKNELLLVP 494          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C71B3_ARATH (Cytochrome P450 71B3 OS=Arabidopsis thaliana GN=CYP71B3 PE=2 SV=2)

HSP 1 Score: 116.316 bits (290), Expect = 1.247e-25
Identity = 54/132 (40.91%), Postives = 82/132 (62.12%), Query Frame = -3
Query:  231 RLHXXXXXXXPRKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL--DNHNMDMEDKFGLTVQKAQPLHAVP 620
            RLH       PR+   D++I G+ +P+   + VN W+IGR+   W+NP  F PERF+    D+KG +FE++PFG+GR+ICPG+   I  + L L +L+  FDW+L  ++ ++DME+    T+ K  PL  VP
Sbjct:  366 RLHPPAPLLLPRETMADIKIQGYDIPRKTILLVNAWSIGRNPELWENPEEFNPERFIDCPMDYKGNSFEMLPFGSGRKICPGIAFGIATVELGLLNLLYYFDWRLAEEDKDIDMEEAGDATIVKKVPLELVP 497          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C98A3_ARATH (Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CYP98A3 PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.629e-25
Identity = 56/133 (42.11%), Postives = 76/133 (57.14%), Query Frame = -3
Query:  234 RLHXXXXXXXPRKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWK----LDNHNMDMEDKFGLTVQKAQPLHAV 620
            RLH       P ++  DV+I G+ +PKG+ V VNVWA+ RD + W NP  F PERFL  + D KG +F L+PFGAGRR+CPG  L I ++  M+  L++ F W          +DM +  GL      P+ AV
Sbjct:  359 RLHPPTPLMLPHRSNADVKIGGYDIPKGSNVHVNVWAVARDPAVWKNPFEFRPERFLEEDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMMSHLLHHFVWTPPQGTKPEEIDMSENPGLVTYMRTPVQAV 491          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C71DA_SOYBN (Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.629e-25
Identity = 56/134 (41.79%), Postives = 79/134 (58.96%), Query Frame = -3
Query:  231 RLHXXXXXXXPRKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL----DNHNMDMEDKFGLTVQKAQPLHAVP 620
            RLH       PR + +  +I G+ +P   ++ +N WAIGR+   W    +F PERFL S+ DF+G +FE IPFGAGRRICPG+  AI  + L L  L+  FDWKL     N  +DM +  G+T+++   L  +P
Sbjct:  372 RLHPPVPLLVPRVSRERCQINGYEIPSKTRIIINAWAIGRNPKYWGETESFKPERFLNSSIDFRGTDFEFIPFGAGRRICPGITFAIPNIELPLAQLLYHFDWKLPNKMKNEELDMTESNGITLRRQNDLCLIP 505          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C71B5_ARATH (Cytochrome P450 71B5 OS=Arabidopsis thaliana GN=CYP71B5 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.629e-25
Identity = 56/134 (41.79%), Postives = 78/134 (58.21%), Query Frame = -3
Query:  231 RLHXXXXXXXPRKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAQPLHAVP 620
            RLH       PR    D+ I G+++PK   + +N + IGRD   W  P  FIPERF+ +  ++KGQ+FEL+PFGAGRR+CPG+   I ++ L L SL+  FDW L N     ++DME+     + K   L  VP
Sbjct:  360 RLHPPAPLLLPRLTMSDINIQGYSIPKNTMIQINTYTIGRDPKNWTKPDEFIPERFVDNPIEYKGQHFELLPFGAGRRVCPGMATGITIVELGLLSLLYFFDWSLPNGMTTKDIDMEEDGAFVIAKKVSLELVP 493          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C71AM_ARATH (Cytochrome P450 71A22 OS=Arabidopsis thaliana GN=CYP71A22 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.629e-25
Identity = 53/134 (39.55%), Postives = 84/134 (62.69%), Query Frame = -3
Query:  234 RLHXXXXXXXPRKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWD-NPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDNHNMD----MEDKFGLTVQKAQPLHAV 620
            RLH       P ++T+DV +  + +P G QV +N WAIGR+ +TW  +   F PER L S+ DF+G NFELIPFGAGRRICP +  A+ ++ + L +L++ +DW+L    ++    + +  G+ + +  PL+A+
Sbjct:  352 RLHPPLPLMVPHESTQDVRLGDYHIPAGTQVMINAWAIGREAATWGPDAEKFRPERHLNSSVDFRGHNFELIPFGAGRRICPAISFAVILIEVTLANLVHRYDWRLPEEYIEDQTNVAESTGMVIHRLFPLYAI 485          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C71BX_ARATH (Cytochrome P450 71B36 OS=Arabidopsis thaliana GN=CYP71B36 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.127e-25
Identity = 54/134 (40.30%), Postives = 81/134 (60.45%), Query Frame = -3
Query:  231 RLHXXXXXXXPRKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLD----NHNMDMEDKFGLTVQKAQPLHAVP 620
            RLH       PR+   + E+  + +P   +++VNVWAIGRD  TW +P  F+PERF+ S+ D KGQ+FEL+PFG+GRR+CP + +   M+   L +++  FDWK+       ++D+E+  GL   K   L  VP
Sbjct:  361 RLHPPSPFLIPRQVMSEFELNDYVIPVKTRLYVNVWAIGRDPDTWKDPEEFLPERFVNSSIDAKGQHFELLPFGSGRRMCPAMYMGTTMVEFGLANMLYHFDWKIPVGMVAEDIDLEESPGLNASKKNELVLVP 494          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C71BH_ARATH (Cytochrome P450 71B17 OS=Arabidopsis thaliana GN=CYP71B17 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.127e-25
Identity = 58/134 (43.28%), Postives = 81/134 (60.45%), Query Frame = -3
Query:  231 RLHXXXXXXXPRKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL----DNHNMDMEDKFGLTVQKAQPLHAVP 620
            RLH       PR+    V++ G+ +P   ++ VN WAIGRD   W +P  F PERF+ S  D++GQ+FEL+PFG+GRRICPG+ + +  L L L +L+  FDWKL     + ++D E+   LTV K   L  VP
Sbjct:  365 RLHPVAPLLLPRETMAHVKVQGYDIPPKRRILVNAWAIGRDPKLWTDPEEFKPERFIDSPVDYRGQHFELLPFGSGRRICPGMAMGMATLELGLLNLLYFFDWKLPDGMSHKDIDTEEAGTLTVVKKVHLKLVP 498          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C71C1_MAIZE (Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.778e-25
Identity = 57/140 (40.71%), Postives = 80/140 (57.14%), Query Frame = -3
Query:  231 RLHXXXXXXXPRKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFL----GSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL------DNHNMDMEDKFGLTVQKAQPLHAVP 620
            R+H       P  +T D EI G+T+P G +V VN WA+ RD + WD    F PERFL     +  D  G++   +PFGAGRRIC G   AI  + +ML +LI  FDW++          +DM D+FG+T+++ Q L+ VP
Sbjct:  387 RIHPPAPFLLPHFSTHDCEINGYTIPAGTRVIVNAWALARDPTCWDKAEEFFPERFLEQGRDAEVDMYGKDIRFVPFGAGRRICAGATFAIATVEIMLANLIYHFDWEMPAEMERTGAKVDMSDQFGMTLRRTQKLYLVP 526          
The following BLAST results are available for this feature:
BLAST of CB305039 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 223
Match NameE-valueIdentityDescription
C71A1_PERAE9.550e-2648.57Cytochrome P450 71A1 OS=Persea americana GN=CYP71A... [more]
C71B9_ARATH1.247e-2542.54Cytochrome P450 71B9 OS=Arabidopsis thaliana GN=CY... [more]
C71B3_ARATH1.247e-2540.91Cytochrome P450 71B3 OS=Arabidopsis thaliana GN=CY... [more]
C98A3_ARATH1.629e-2542.11Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CY... [more]
C71DA_SOYBN1.629e-2541.79Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 P... [more]
C71B5_ARATH1.629e-2541.79Cytochrome P450 71B5 OS=Arabidopsis thaliana GN=CY... [more]
C71AM_ARATH1.629e-2539.55Cytochrome P450 71A22 OS=Arabidopsis thaliana GN=C... [more]
C71BX_ARATH2.127e-2540.30Cytochrome P450 71B36 OS=Arabidopsis thaliana GN=C... [more]
C71BH_ARATH2.127e-2543.28Cytochrome P450 71B17 OS=Arabidopsis thaliana GN=C... [more]
C71C1_MAIZE2.778e-2540.71Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 S... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0003_IVaR_C02 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0003_IVaR_C02 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB305039 ID=CB305039; Name=CB305039; organism=Citrus sinensis; type=EST; length=622bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGCTATTAAATNNNATGACT
TTATAGTTTATTGAAGATTAACTCTGTTAAGTTGCGTGTCTACATAAAAA
AAAATAAGAGCGCCCACACCTGAGAATGATTACACACACATATAACTAAC
CACCAAGCGCTTTATATAGTGGCTACCACCAAGCGCTTTATATATTGGCT
ACGAACTATAGTATAGAACTAGATGGCACCAGGGACAGCATGAAGGGGTT
GAGCCTTCTGTACGGTGAGGCCAAATTTATCTTCCATGTCCATGTTGTGG
TTATCAAGCTTCCAATCAAAAGAGTTAATAAGTGAACCCAACATTAGATG
TAACATTCTGATTGCCAATGGTAAACCAGGACAAATTCGTCGTCCAGCTC
CGAAGGGAATTAGCTCAAAATTCTGGCCTTTGAAATCAGCATTTGACCCT
AAGAACCTTTCGGGAATAAAAGTGTGAGGGTTGTCCCATGTGCTTTCATC
TCTGCCAATAGCCCATACATTGACAAAAACTTGTGCACCTTTTGGCACTG
TGAAGCCTGCAATTTCAACATCTTTTGTGGCTTTGCGGGGAAGTAATAAG
GGAGCTGCAGGGTGCAATCTCA
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