CB305039

Overview
NameCB305039
Unique NameCB305039
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length622
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11430 contig Csv1_Contig11430:1424..2045. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C71BP_ARATH (Cytochrome P450 71B25 OS=Arabidopsis thaliana GN=CYP71B25 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.778e-25
Identity = 54/132 (40.91%), Postives = 80/132 (60.61%), Query Frame = -3
Query:  231 RLHXXXXXXXPRKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL--DNHNMDMEDKFGLTVQKAQPLHAVP 620
            RLH       PR+   D++I G+ +P+   + V+ W++GRD   W NP  F PERF+    D+KG +FE +PFG+GRR CPG+  AI  + L L +L+  FDWKL  +  +M+ME+   +T+ K  PL  +P
Sbjct:  366 RLHPAAPLLLPRETMADIKIQGYDIPRKTLLLVSAWSLGRDPKYWKNPEEFNPERFIDCPVDYKGHSFEFLPFGSGRRFCPGMASAIATIELTLLNLLYFFDWKLPEEMKDMNMEESGDVTIVKKVPLELLP 497          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C98A2_SOYBN (Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 6.190e-25
Identity = 55/133 (41.35%), Postives = 77/133 (57.89%), Query Frame = -3
Query:  234 RLHXXXXXXXPRKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWK----LDNHNMDMEDKFGLTVQKAQPLHAV 620
            RLH       P +A  +V++ G+ +PKG+ V VNVWA+ RD + W +P  F PERFL  + D KG +F L+PFG+GRR+CPG  L I +   MLG L++ F W     +    +DM +  GL      P+ AV
Sbjct:  360 RLHPPTPLMLPHRANANVKVGGYDIPKGSNVHVNVWAVARDPAVWKDPLEFRPERFLEEDVDMKGHDFRLLPFGSGRRVCPGAQLGINLAASMLGHLLHHFCWTPPEGMKPEEIDMGENPGLVTYMRTPIQAV 492          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C93A1_SOYBN (Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 6.190e-25
Identity = 55/124 (44.35%), Postives = 81/124 (65.32%), Query Frame = -3
Query:  231 RKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFL--GSN-ADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL--DNHNMDMEDKFGLTVQKAQPLHAVP 587
            R+++K   + G+ +P   ++FVNVWAIGRD + W+ P  F PERF+  G N  D +GQ++  IPFG+GRR CPG  LA +++ + L  +I  F WKL   N  +DME+K G+T+ +A P+  VP
Sbjct:  376 RESSKSAVVCGYDIPAKTRLFVNVWAIGRDPNHWEKPFEFRPERFIRDGQNQLDVRGQHYHFIPFGSGRRTCPGASLAWQVVPVNLAIIIQCFQWKLVGGNGKVDMEEKSGITLPRANPIICVP 499          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C71DI_MENSP (Cytochrome P450 71D18 OS=Mentha spicata GN=CYP71D18 PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 6.190e-25
Identity = 54/123 (43.90%), Postives = 79/123 (64.23%), Query Frame = -3
Query:  231 RKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL----DNHNMDMEDKFGLTVQKAQPLHAVP 587
            R++ ++ E+ G+T+P   ++F+NVWAIGRD   W++P TF PERF   + DF G +FE IPFGAGRRICPGL   +  + + L  L+  FDWKL     + ++DM +  GL+  K + +  VP
Sbjct:  368 RQSREECEVNGYTIPAKTRIFINVWAIGRDPQYWEDPDTFRPERFDEVSRDFMGNDFEFIPFGAGRRICPGLHFGLANVEIPLAQLLYHFDWKLPQGMTDADLDMTETPGLSGPKKKNVCLVP 490          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C71DI_MENGR (Cytochrome P450 71D18 OS=Mentha gracilis GN=CYP71D18 PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 6.190e-25
Identity = 54/123 (43.90%), Postives = 79/123 (64.23%), Query Frame = -3
Query:  231 RKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL----DNHNMDMEDKFGLTVQKAQPLHAVP 587
            R++ ++ E+ G+T+P   ++F+NVWAIGRD   W++P TF PERF   + DF G +FE IPFGAGRRICPGL   +  + + L  L+  FDWKL     + ++DM +  GL+  K + +  VP
Sbjct:  368 RQSREECEVNGYTIPAKTRIFINVWAIGRDPQYWEDPDTFRPERFDEVSRDFMGNDFEFIPFGAGRRICPGLHFGLANVEIPLAQLLYHFDWKLPQGMTDADLDMTETPGLSGPKKKNVCLVP 490          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C71C3_MAIZE (Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 8.084e-25
Identity = 56/142 (39.44%), Postives = 83/142 (58.45%), Query Frame = -3
Query:  225 RLHXXXXXXXPRKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNAD----FKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDNHNMD------MEDKFGLTVQKAQPLHAVPGA 620
            RLH       P  +T D +I G+ +P   +V VN WAIGRD + W+ P  F+PERF+    D    + GQ+F  +PFG+GRRICPG    +  + +ML +L+  FDW++ N   D      M++KFGL +++ + L+ VP A
Sbjct:  392 RLHPPGPLLLPHYSTADCQIDGYHIPANPRVLVNGWAIGRDPAVWEKPEEFMPERFMRDGWDKSNSYSGQDFRYLPFGSGRRICPGANFGLATMEIMLANLMYHFDWEVPNEKEDGCWKVSMDEKFGLMLRRNELLYLVPRA 533          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C71D7_SOLCH (Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71D7 PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.056e-24
Identity = 54/133 (40.60%), Postives = 79/133 (59.40%), Query Frame = -3
Query:  234 RLHXXXXXXXPRKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL----DNHNMDMEDKFGLTVQKAQPLHAV 620
            RLH       PR+  ++ EI G+T+P   +V VNVWA+GRD   WD+  +F PERF   + DF G NFE +PFG GRRICPG+   +  ++L L  L+  FDWKL    +  ++D+ +  G+T  +   L+ +
Sbjct:  362 RLHAPVPLLVPRECREETEINGYTIPVKTKVMVNVWALGRDPKYWDDAESFKPERFEQCSIDFIGNNFEYLPFGGGRRICPGISFGLANVYLPLAQLLYHFDWKLPTGMEPKDLDLTESAGITAARKGDLYLI 494          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C71B6_ARATH (Cytochrome P450 71B6 OS=Arabidopsis thaliana GN=CYP71B6 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.379e-24
Identity = 54/130 (41.54%), Postives = 78/130 (60.00%), Query Frame = -3
Query:  231 RLHXXXXXXXPRKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDNHNMDMEDKFGLTVQKAQPLHAVP 620
            RLH       PR+A  + +I G+ +  G ++ VN WAIGR+   W +P  FIPERF+ SN + KG +FEL+PFG+GRR CP + + +  +   L +L+  FDWK     + +E+  GLT  +  PLH VP
Sbjct:  367 RLHAPSPILIPREAMTNFKIKGYDIYPGTRIHVNAWAIGRNPDVWKDPDEFIPERFVDSNVETKGTSFELLPFGSGRRGCPAMYVGLSTVEYTLANLLYHFDWKA-TEEVSVEEAPGLTSHRKHPLHLVP 495          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C71C2_MAIZE (Cytochrome P450 71C2 OS=Zea mays GN=CYP71C2 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.801e-24
Identity = 55/136 (40.44%), Postives = 81/136 (59.56%), Query Frame = -3
Query:  231 RLHXXXXXXXPRKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFL----GSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL--DNHNMDMEDKFGLTVQKAQPLHAVP 620
            RLH       P  +T D EI G+ VP G +V V+ WA+GRD +TW+ P  F+PERF+      +   KG++   IPFG+GRRICPG+      + +ML +L+  FDW++      + ME+ FGLT+++ + L  VP
Sbjct:  397 RLHPPAPFLLPHYSTADSEIDGYFVPAGTRVLVHAWALGRDRTTWEKPEEFMPERFVQEPGAVDVHMKGKDLRFIPFGSGRRICPGMNFGFATMEVMLANLMYHFDWEVPGSGAGVSMEESFGLTLRRKEKLLLVP 532          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C71A9_SOYBN (Cytochrome P450 71A9 OS=Glycine max GN=CYP71A9 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.352e-24
Identity = 55/126 (43.65%), Postives = 79/126 (62.70%), Query Frame = -3
Query:  255 RLHXXXXXXXPRKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWK----LDNHNMDMEDKFGLTVQK 620
            RLH       PR+ T++  I GF +P   +V VN  +I  D   W+NP+ F+PERFL S  DFKGQ+FE++PFG GRR CPG+  A+ ++ L L +L+  FDW+    L   ++DME+  G+T+ K
Sbjct:  361 RLHPPAPLLVPREITENCTIKGFEIPAKTRVLVNAKSIAMDPCCWENPNEFLPERFLVSPIDFKGQHFEMLPFGVGRRGCPGVNFAMPVVELALANLLFRFDWELPLGLGIQDLDMEEAIGITIHK 486          
The following BLAST results are available for this feature:
BLAST of CB305039 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 223
Match NameE-valueIdentityDescription
C71BP_ARATH2.778e-2540.91Cytochrome P450 71B25 OS=Arabidopsis thaliana GN=C... [more]
C98A2_SOYBN6.190e-2541.35Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=... [more]
C93A1_SOYBN6.190e-2544.35Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=... [more]
C71DI_MENSP6.190e-2543.90Cytochrome P450 71D18 OS=Mentha spicata GN=CYP71D1... [more]
C71DI_MENGR6.190e-2543.90Cytochrome P450 71D18 OS=Mentha gracilis GN=CYP71D... [more]
C71C3_MAIZE8.084e-2539.44Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 S... [more]
C71D7_SOLCH1.056e-2440.60Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71... [more]
C71B6_ARATH1.379e-2441.54Cytochrome P450 71B6 OS=Arabidopsis thaliana GN=CY... [more]
C71C2_MAIZE1.801e-2440.44Cytochrome P450 71C2 OS=Zea mays GN=CYP71C2 PE=2 S... [more]
C71A9_SOYBN2.352e-2443.65Cytochrome P450 71A9 OS=Glycine max GN=CYP71A9 PE=... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0003_IVaR_C02 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0003_IVaR_C02 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB305039 ID=CB305039; Name=CB305039; organism=Citrus sinensis; type=EST; length=622bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGCTATTAAATNNNATGACT
TTATAGTTTATTGAAGATTAACTCTGTTAAGTTGCGTGTCTACATAAAAA
AAAATAAGAGCGCCCACACCTGAGAATGATTACACACACATATAACTAAC
CACCAAGCGCTTTATATAGTGGCTACCACCAAGCGCTTTATATATTGGCT
ACGAACTATAGTATAGAACTAGATGGCACCAGGGACAGCATGAAGGGGTT
GAGCCTTCTGTACGGTGAGGCCAAATTTATCTTCCATGTCCATGTTGTGG
TTATCAAGCTTCCAATCAAAAGAGTTAATAAGTGAACCCAACATTAGATG
TAACATTCTGATTGCCAATGGTAAACCAGGACAAATTCGTCGTCCAGCTC
CGAAGGGAATTAGCTCAAAATTCTGGCCTTTGAAATCAGCATTTGACCCT
AAGAACCTTTCGGGAATAAAAGTGTGAGGGTTGTCCCATGTGCTTTCATC
TCTGCCAATAGCCCATACATTGACAAAAACTTGTGCACCTTTTGGCACTG
TGAAGCCTGCAATTTCAACATCTTTTGTGGCTTTGCGGGGAAGTAATAAG
GGAGCTGCAGGGTGCAATCTCA
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