CB305039

Overview
NameCB305039
Unique NameCB305039
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length622
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11430 contig Csv1_Contig11430:1424..2045. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C71A2_SOLME (Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71A2 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.352e-24
Identity = 54/123 (43.90%), Postives = 78/123 (63.41%), Query Frame = -3
Query:  234 RKATKDVEIAGFT-VPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAQPLHAV 587
            R++ +DV + G+  +P   Q  +N WAIGRD  +W+NP  + PERFL S+AD KG NF+L+PFGAGRR CPG   AI ++ L L  L++ FD+ L       ++DM +  G+T ++  PL  V
Sbjct:  379 RESMEDVNLLGYYHIPARTQAIINAWAIGRDPLSWENPEEYQPERFLNSDADVKGLNFKLLPFGAGRRGCPGSSFAIAVIELALARLVHKFDFALPEGIKPEDLDMTETIGITTRRKLPLLVV 501          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C71DB_LOTJA (Cytochrome P450 71D11 (Fragment) OS=Lotus japonicus GN=CYP71D11 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.072e-24
Identity = 53/123 (43.09%), Postives = 76/123 (61.79%), Query Frame = -3
Query:  231 RKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL----DNHNMDMEDKFGLTVQKAQPLHAVP 587
            R+  +  EI G+ +P  + V VN +AIG D   W  P  F PERF+ S+ D+KG NFE +PFGAGRRICPG+   +  + L+L  L+  FDW L     N ++D+ ++FG+TV K + L  +P
Sbjct:  359 RECRQACEINGYHIPAKSTVLVNTFAIGTDSKYWAEPERFCPERFIDSSIDYKGTNFEHLPFGAGRRICPGINYGMANVELVLALLLYHFDWTLPKGIKNEDLDLTEEFGVTVSKKEDLCLIP 481          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C71D8_SOYBN (Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.072e-24
Identity = 52/123 (42.28%), Postives = 74/123 (60.16%), Query Frame = -3
Query:  231 RKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAQPLHAVP 587
            R+      I G+ +P   +V +N WAIGRD   W +   FIPERF  S+ DFKG +FE IPFGAGRR+CPG+   +  + L L  L+  F+W+L N     ++DM++ FG+TV +   L  +P
Sbjct:  376 RECIISTNIDGYEIPIKTKVMINTWAIGRDPQYWSDADRFIPERFNDSSIDFKGNSFEYIPFGAGRRMCPGMTFGLASITLPLALLLYHFNWELPNKMKPEDLDMDEHFGMTVARKNKLFLIP 498          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C71D9_SOYBN (Cytochrome P450 71D9 OS=Glycine max GN=CYP71D9 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.012e-24
Identity = 54/137 (39.42%), Postives = 78/137 (56.93%), Query Frame = -3
Query:  222 RLHXXXXXXXPRKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL----DNHNMDMEDKFGLTVQKAQPLHAVPGAI 620
            RLH       PR+  +  EI G+ +P  ++V VN WAIGRD   W     F PERF+  + ++K  +FE IPFGAGRR+CPGL   +  +  +L  L+  FDWKL     N ++ M + FG+TV +   L+ +P  +
Sbjct:  358 RLHPPAPLLLPRECGQACEINGYHIPAKSRVIVNAWAIGRDPRLWTEAERFYPERFIERSIEYKSNSFEFIPFGAGRRMCPGLTFGLSNVEYVLAMLMYHFDWKLPKGTKNEDLGMTEIFGITVARKDDLYLIPKTV 494          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C71AL_ARATH (Cytochrome P450 71A21 OS=Arabidopsis thaliana GN=CYP71A21 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.012e-24
Identity = 51/134 (38.06%), Postives = 82/134 (61.19%), Query Frame = -3
Query:  234 RLHXXXXXXXPRKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWD-NPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL----DNHNMDMEDKFGLTVQKAQPLHAV 620
            RLH       P ++ +DV +  + +P G QV +N WAIGR+ +TW  +   F PER L S+ DF+G NFEL+PFGAGRRICP +  A+ ++ + L + ++ +DWKL      +  ++ +  G+ + +  PL+A+
Sbjct:  352 RLHPPLPLLAPHESIQDVILGDYHIPAGTQVMINAWAIGREAATWGPDAEKFRPERHLDSSVDFRGHNFELVPFGAGRRICPAISFAVVLIEVALANFVHRYDWKLPEDSKENQTNVAESTGMVIHRLFPLYAI 485          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C83A1_ARATH (Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CYP83A1 PE=1 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 5.240e-24
Identity = 56/124 (45.16%), Postives = 77/124 (62.10%), Query Frame = -3
Query:  231 RKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWD-NPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAQPLHAVP 587
            R   +D +IAG+ +P G  V VN WA+ RDE  W  NP  F PERFL    DFKG ++E IPFG+GRR+CPG+ L   ML +   +L+ SF++KL N     +++M+   GL + K+Q L  VP
Sbjct:  373 RACIQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWGPNPDEFRPERFLEKEVDFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLSFNFKLPNGMKPDDINMDVMTGLAMHKSQHLKLVP 496          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C71BA_ARATH (Cytochrome P450 71B10 OS=Arabidopsis thaliana GN=CYP71B10 PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 5.240e-24
Identity = 55/134 (41.04%), Postives = 79/134 (58.96%), Query Frame = -3
Query:  231 RLHXXXXXXXPRKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAQPLHAVP 620
            RLH       PR+   + +I G+T+    ++ VNVWAIGRD   W +P  F+PERF+  + D KGQ++EL+PFG+GRRICP + + I  +   L +L+  FDWKL       ++ M++  GLT  K   L  VP
Sbjct:  364 RLHPVAPLLVPREVISEFKINGYTIQPKTRLHVNVWAIGRDPEIWKDPEEFLPERFMDCDIDVKGQDYELLPFGSGRRICPAVYMGITTVEFGLANLLYHFDWKLPEGVAVEDIYMDEASGLTSHKKHDLLLVP 497          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C71A4_SOLME (Cytochrome P450 71A4 OS=Solanum melongena GN=CYP71A4 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 6.844e-24
Identity = 55/134 (41.04%), Postives = 81/134 (60.45%), Query Frame = -3
Query:  234 RLHXXXXXXXPRKATKDVEIAGFT-VPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAQPLHAV 620
            RLH       PR++ +DV++ G+  +P   Q  +NVWAIGRD  +W+NP  F PERFL ++ D KG  FEL+PFG+GRR CPG   AI ++ L L  L++ F++ L       ++DM +  G+  ++  PL  V
Sbjct:  368 RLHPPNSLLVPRESMEDVKLLGYYHIPARTQALINVWAIGRDPLSWENPEEFCPERFLNNDIDMKGLKFELLPFGSGRRGCPGSSFAIAVIELALARLVHKFNFALPKGTKPEDLDMTECTGIATRRKSPLPVV 501          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C71AQ_ARATH (Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=CYP71A26 PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 8.938e-24
Identity = 52/134 (38.81%), Postives = 82/134 (61.19%), Query Frame = -3
Query:  234 RLHXXXXXXXPRKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWD-NPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLD----NHNMDMEDKFGLTVQKAQPLHAV 620
            RLH       P ++T+DV +    +P G QV +N WAIGR+ +TW  +   F PER L S+ D++GQ FELIPFG+GRRICP +  A+ +  ++L +L++ FDW+L         ++ +  G+ + +  PL+A+
Sbjct:  351 RLHPPLPLMVPHESTQDVRLGDHHIPAGTQVLINAWAIGREAATWGPDVEEFRPERHLDSSVDYRGQAFELIPFGSGRRICPAISFAVVLNEVVLANLVHRFDWRLSVESTEDQTEVAESTGIAIHRMFPLYAI 484          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C71DD_MENPI (Cytochrome P450 71D13 OS=Mentha piperita GN=CYP71D13 PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.167e-23
Identity = 53/123 (43.09%), Postives = 75/123 (60.98%), Query Frame = -3
Query:  231 RKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL----DNHNMDMEDKFGLTVQKAQPLHAVP 587
            R   ++ E+ G+T+P  A++ +NVW++GR+   W+ P TF PERF   + DF G +FE IPFGAGRRICPGL   +  + + L  L+  FDWKL    +  +MDM +  GLT  +   L  VP
Sbjct:  371 RSCREECEVNGYTIPNKARIMINVWSMGRNPLYWEKPETFWPERFDQVSRDFMGNDFEFIPFGAGRRICPGLNFGLANVEVPLAQLLYHFDWKLAEGMNPSDMDMSEAEGLTGIRKNNLLLVP 493          
The following BLAST results are available for this feature:
BLAST of CB305039 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 223
Match NameE-valueIdentityDescription
C71A2_SOLME2.352e-2443.90Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71... [more]
C71DB_LOTJA3.072e-2443.09Cytochrome P450 71D11 (Fragment) OS=Lotus japonicu... [more]
C71D8_SOYBN3.072e-2442.28Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=... [more]
C71D9_SOYBN4.012e-2439.42Cytochrome P450 71D9 OS=Glycine max GN=CYP71D9 PE=... [more]
C71AL_ARATH4.012e-2438.06Cytochrome P450 71A21 OS=Arabidopsis thaliana GN=C... [more]
C83A1_ARATH5.240e-2445.16Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CY... [more]
C71BA_ARATH5.240e-2441.04Cytochrome P450 71B10 OS=Arabidopsis thaliana GN=C... [more]
C71A4_SOLME6.844e-2441.04Cytochrome P450 71A4 OS=Solanum melongena GN=CYP71... [more]
C71AQ_ARATH8.938e-2438.81Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=C... [more]
C71DD_MENPI1.167e-2343.09Cytochrome P450 71D13 OS=Mentha piperita GN=CYP71D... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0003_IVaR_C02 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0003_IVaR_C02 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB305039 ID=CB305039; Name=CB305039; organism=Citrus sinensis; type=EST; length=622bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGCTATTAAATNNNATGACT
TTATAGTTTATTGAAGATTAACTCTGTTAAGTTGCGTGTCTACATAAAAA
AAAATAAGAGCGCCCACACCTGAGAATGATTACACACACATATAACTAAC
CACCAAGCGCTTTATATAGTGGCTACCACCAAGCGCTTTATATATTGGCT
ACGAACTATAGTATAGAACTAGATGGCACCAGGGACAGCATGAAGGGGTT
GAGCCTTCTGTACGGTGAGGCCAAATTTATCTTCCATGTCCATGTTGTGG
TTATCAAGCTTCCAATCAAAAGAGTTAATAAGTGAACCCAACATTAGATG
TAACATTCTGATTGCCAATGGTAAACCAGGACAAATTCGTCGTCCAGCTC
CGAAGGGAATTAGCTCAAAATTCTGGCCTTTGAAATCAGCATTTGACCCT
AAGAACCTTTCGGGAATAAAAGTGTGAGGGTTGTCCCATGTGCTTTCATC
TCTGCCAATAGCCCATACATTGACAAAAACTTGTGCACCTTTTGGCACTG
TGAAGCCTGCAATTTCAACATCTTTTGTGGCTTTGCGGGGAAGTAATAAG
GGAGCTGCAGGGTGCAATCTCA
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