CB305039

Overview
NameCB305039
Unique NameCB305039
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length622
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11430 contig Csv1_Contig11430:1424..2045. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C71AE_ARATH (Cytochrome P450 71A14 OS=Arabidopsis thaliana GN=CYP71A14 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.167e-23
Identity = 54/135 (40.00%), Postives = 80/135 (59.26%), Query Frame = -3
Query:  231 RLHXXXXXXXPRKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWD-NPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLD----NHNMDMEDKFGLTVQKAQPLHAVP 620
            RLH       PR+ ++D+++ G+ +  G QV +N WAI RD  TW  +   F PER L S  DF+G NFE IPFG+GRRICPG+  A+ ++ + L +L+N F+W+++        D+ +  GL V +  PL   P
Sbjct:  360 RLHPPLPLLVPRELSEDIKLKGYDIAAGTQVIINAWAIQRDTMTWGIDAEEFRPERHLDSLVDFRGTNFEFIPFGSGRRICPGIGFAMALVEVTLANLVNRFNWRMEVQHSGDEYDLAESTGLDVCRKFPLIVFP 494          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C71AI_ARATH (Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=CYP71A18 PE=2 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 3.396e-23
Identity = 53/138 (38.41%), Postives = 81/138 (58.70%), Query Frame = -3
Query:  222 RLHXXXXXXXPRKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWD-NPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLD----NHNMDMEDKFGLTVQKAQPLHAVPGAI 620
            R+H       PR  T+DV++ G+ +  G +V +N W+I RD + W  +   F PER L S  D+ GQ+ + IPFG+GRRICPG+ LA+ ++ + L +L+  FDW +D        D+ + FGL V +  PL A P ++
Sbjct:  359 RVHPPLPLILPRLLTEDVKVKGYDIAAGTEVLINAWSIHRDPAIWGPDAEEFKPERHLDSTLDYHGQDLKYIPFGSGRRICPGINLAMGLVEVTLANLVGRFDWSVDPGPNGDQPDLAEDFGLDVCRKNPLIAFPSSV 496          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C71AF_ARATH (Cytochrome P450 71A15 OS=Arabidopsis thaliana GN=CYP71A15 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 3.396e-23
Identity = 55/135 (40.74%), Postives = 77/135 (57.04%), Query Frame = -3
Query:  231 RLHXXXXXXXPRKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWD-NPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLD----NHNMDMEDKFGLTVQKAQPLHAVP 620
            RLH        R  T+DV++ G+ +  G QV  N WAI RD  TW  +   F PER L S  DF+G NFE IPFG+GRRICPG+  A+ ++ + L +L+N F+W++D        D+ +  G+ V +  PL   P
Sbjct:  359 RLHPPFPLLVLRLLTQDVKLKGYDIAAGTQVITNAWAIQRDIVTWGIDAEEFRPERHLDSPLDFRGTNFEYIPFGSGRRICPGIGFAMALVEVTLANLVNRFNWRMDARLSGDEYDLAEATGIDVCRKFPLIVFP 493          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C71D6_SOLCH (Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71D6 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 4.436e-23
Identity = 54/133 (40.60%), Postives = 75/133 (56.39%), Query Frame = -3
Query:  234 RLHXXXXXXXPRKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL----DNHNMDMEDKFGLTVQKAQPLHAV 620
            RLH       PR+  K+ EI G+T+P   +V VNVWA+GRD   WD+   F PERF   + DF G NFE +PFG GRRICPG    +   +L L  L+  FDWKL    +  ++D+ +  G++      L+ +
Sbjct:  363 RLHAPIPLLVPRECRKETEINGYTIPVKTKVMVNVWALGRDPKYWDDVECFKPERFEQCSIDFIGNNFEYLPFGGGRRICPGTSFGLANDYLPLAQLLCHFDWKLPTGMEPKDLDLTELAGMSAASKDDLYLI 495          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C71AK_ARATH (Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=CYP71A20 PE=2 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 5.794e-23
Identity = 53/137 (38.69%), Postives = 82/137 (59.85%), Query Frame = -3
Query:  225 RLHXXXXXXXPRKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWD-NPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLD----NHNMDMEDKFGLTVQKAQPLHAVPGA 620
            RL        PR  ++DV++ G+ +P G QV VN WAI RD +TW  +   F PER L +N DF+GQ+F+ IPFG+G+RICPG+     ++ + L +++  F+W++D        D+ +  GL V +  PL A+P +
Sbjct:  360 RLRPPAPLLVPRVLSEDVKLKGYNIPAGTQVIVNAWAIQRDTTTWGTDAEEFKPERHLDTNLDFQGQDFKFIPFGSGKRICPGIGFTSALIGVTLANIVKRFNWRMDVEPQRVQHDLTEATGLVVFRKFPLIAIPSS 496          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C7D95_MENSP (Cytochrome P450 71D95 OS=Mentha spicata GN=CYP71D95 PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 7.567e-23
Identity = 52/123 (42.28%), Postives = 73/123 (59.35%), Query Frame = -3
Query:  231 RKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAQPLHAVP 587
            R   ++ E+ G+ +P  A++ +NVW++GR+   W+ P TF PERF   + DF G +FE IPFGAGRRICPGL   +  + + L  L+  FDWKL       +MDM +  GLT  +   L  VP
Sbjct:  368 RSCREECEVNGYKIPNKARIMINVWSMGRNPLYWEKPETFWPERFDQVSRDFMGSDFEFIPFGAGRRICPGLNFGLANVEVPLAQLLYHFDWKLAEGMKPSDMDMSEAEGLTGIRKNNLLLVP 490          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C7D95_MENGR (Cytochrome P450 71D95 OS=Mentha gracilis GN=CYP71D95 PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 7.567e-23
Identity = 52/123 (42.28%), Postives = 73/123 (59.35%), Query Frame = -3
Query:  231 RKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAQPLHAVP 587
            R   ++ E+ G+ +P  A++ +NVW++GR+   W+ P TF PERF   + DF G +FE IPFGAGRRICPGL   +  + + L  L+  FDWKL       +MDM +  GLT  +   L  VP
Sbjct:  368 RSCREECEVNGYKIPNKARIMINVWSMGRNPLYWEKPETFWPERFDQVSRDFMGSDFEFIPFGAGRRICPGLNFGLANVEVPLAQLLYHFDWKLAEGMKPSDMDMSEAEGLTGIRKNNLLLVP 490          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C71BT_ARATH (Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=CYP71B29 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 7.567e-23
Identity = 49/105 (46.67%), Postives = 67/105 (63.81%), Query Frame = -3
Query:  306 RLHXXXXXXXPRKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL 620
            RLH       PR+    V+I G+ +P   Q+ +NV+AI RD   W NP  F P+RFL S+ D+KG NFEL+PFG+GRRICPG+ + I ++   L +L+  FDW L
Sbjct:  361 RLHPAVPFLLPRETLSHVKIQGYDIPAKTQIMINVYAIARDPKLWTNPDEFNPDRFLDSSIDYKGLNFELLPFGSGRRICPGMTMGITLVEFALLNLLYFFDWGL 465          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C71AO_ARATH (Cytochrome P450 71A24 OS=Arabidopsis thaliana GN=CYP71A24 PE=2 SV=3)

HSP 1 Score: 107.071 bits (266), Expect = 7.567e-23
Identity = 52/134 (38.81%), Postives = 80/134 (59.70%), Query Frame = -3
Query:  234 RLHXXXXXXXPRKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWD-NPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL----DNHNMDMEDKFGLTVQKAQPLHAV 620
            RLH       P ++T DV++  + +P G  V +N WAIGR+ +TW  +   F PER L S  D++GQ+ EL+PFGAGRRICP +  A+ +  ++L +L++ FDW L      +  D+ +  G+ V +  PL A+
Sbjct:  353 RLHPPLPLMVPHESTHDVKLRDYHIPAGTHVMINAWAIGREAATWGPDAEEFRPERHLNSYVDYRGQDTELVPFGAGRRICPAISFAVVLDEVVLANLVHQFDWTLPEESTEYQTDVAESTGMAVHRMFPLFAM 486          
BLAST of CB305039 vs. ExPASy Swiss-Prot
Match: C71B7_ARATH (Cytochrome P450 71B7 OS=Arabidopsis thaliana GN=CYP71B7 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.291e-22
Identity = 52/134 (38.81%), Postives = 80/134 (59.70%), Query Frame = -3
Query:  231 RLHXXXXXXXPRKATKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL----DNHNMDMEDKFGLTVQKAQPLHAVP 620
            RLH       PR+    V+I G+ +P   Q+ +N+++I RD   W NP  F P+RFL S+ D++G NFEL+PFG+GRRICPG+ L I  + L L +L+  FDW +    +  ++++E+   + + K   L  VP
Sbjct:  367 RLHPAAPLLLPRETMSHVKIQGYDIPVKTQMMINIYSIARDPKLWTNPDEFNPDRFLDSSIDYRGLNFELLPFGSGRRICPGMTLGITTVELGLLNLLYFFDWVVPVGKNVKDINLEETGSIIISKKTTLELVP 500          
The following BLAST results are available for this feature:
BLAST of CB305039 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 223
Match NameE-valueIdentityDescription
C71AE_ARATH1.167e-2340.00Cytochrome P450 71A14 OS=Arabidopsis thaliana GN=C... [more]
C71AI_ARATH3.396e-2338.41Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=C... [more]
C71AF_ARATH3.396e-2340.74Cytochrome P450 71A15 OS=Arabidopsis thaliana GN=C... [more]
C71D6_SOLCH4.436e-2340.60Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71... [more]
C71AK_ARATH5.794e-2338.69Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=C... [more]
C7D95_MENSP7.567e-2342.28Cytochrome P450 71D95 OS=Mentha spicata GN=CYP71D9... [more]
C7D95_MENGR7.567e-2342.28Cytochrome P450 71D95 OS=Mentha gracilis GN=CYP71D... [more]
C71BT_ARATH7.567e-2346.67Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=C... [more]
C71AO_ARATH7.567e-2338.81Cytochrome P450 71A24 OS=Arabidopsis thaliana GN=C... [more]
C71B7_ARATH1.291e-2238.81Cytochrome P450 71B7 OS=Arabidopsis thaliana GN=CY... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0003_IVaR_C02 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0003_IVaR_C02 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB305039 ID=CB305039; Name=CB305039; organism=Citrus sinensis; type=EST; length=622bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGCTATTAAATNNNATGACT
TTATAGTTTATTGAAGATTAACTCTGTTAAGTTGCGTGTCTACATAAAAA
AAAATAAGAGCGCCCACACCTGAGAATGATTACACACACATATAACTAAC
CACCAAGCGCTTTATATAGTGGCTACCACCAAGCGCTTTATATATTGGCT
ACGAACTATAGTATAGAACTAGATGGCACCAGGGACAGCATGAAGGGGTT
GAGCCTTCTGTACGGTGAGGCCAAATTTATCTTCCATGTCCATGTTGTGG
TTATCAAGCTTCCAATCAAAAGAGTTAATAAGTGAACCCAACATTAGATG
TAACATTCTGATTGCCAATGGTAAACCAGGACAAATTCGTCGTCCAGCTC
CGAAGGGAATTAGCTCAAAATTCTGGCCTTTGAAATCAGCATTTGACCCT
AAGAACCTTTCGGGAATAAAAGTGTGAGGGTTGTCCCATGTGCTTTCATC
TCTGCCAATAGCCCATACATTGACAAAAACTTGTGCACCTTTTGGCACTG
TGAAGCCTGCAATTTCAACATCTTTTGTGGCTTTGCGGGGAAGTAATAAG
GGAGCTGCAGGGTGCAATCTCA
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